iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-045641

Ensembl Protein ID

ENSGGOP00000012326.2

UniProt Accession

G3RA68; G3RA68_GORGO

Protein Name

Uncharacterized protein

Gene Name

SF3A1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000012631.2	ENSGGOT00000031266.1	ENSGGOP00000017948.1
ENSGGOG00000012631.2	ENSGGOT00000012683.2	ENSGGOP00000012326.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	8.50e-17	61.2	707	790

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlk....v...npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           ++v+v++++++ e++l+    v   + +d+V+++K ki++++g+p+ +q+L+y+G+ ++d ++La+y++ +g +ihl +k++gg
   Q: 707  IKVQVPNMQDKtEWKLNgqvlVftlPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGG 790
           6899*************996516658888**************************************************99875 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MPAGPVQAVP PPPPVPTEPK QPTEEEASSK EDSAPSKPVV GIIYPPPEVR NIVDKTASFV 60
ARNGPEFEAR IRQNEINNPK FNFLNPNDPY HAYYRHKVSE FKEGKAQEPS AAIPKVMQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCCG GACCCGTGCA GGCGGTGCCC CCGCCGCCGC CCGTGCCCAC GGAGCCCAAA 60
CAGGTNNNNN NNNNNGTGCC CACGGAGCCC AAACAGGTAC CTCTCCCCCG CCCCTCAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0016607--C:nuclear speck
GO:0005684--C:U2-type spliceosomal complex
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	35.90	2.00e-48	187.00
IUUC-Aml-002416	Ailuropoda melanoleuca	95.98	0.00e+00	1132.00
IUUC-Atr-003001	Amborella trichopoda	48.57	7.00e-66	245.00
IUUC-Apl-003584	Anas platyrhynchos	90.89	0.00e+00	936.00
IUUC-Aca-004690	Anolis carolinensis	83.74	0.00e+00	1010.00
IUUC-Aly-005487	Arabidopsis lyrata	44.81	1.00e-55	211.00
IUUC-Ath-007275	Arabidopsis thaliana	44.77	2.00e-57	217.00
IUUC-Acl-008320	Aspergillus clavatus	43.21	1.00e-47	184.00
IUUC-Afl-008707	Aspergillus flavus	46.69	8.00e-58	218.00
IUUC-Afu-008786	Aspergillus fumigatus	41.11	1.00e-46	181.00
IUUC-Ani-009307	Aspergillus nidulans	44.25	1.00e-52	200.00
IUUC-Ang-009761	Aspergillus niger	46.34	1.00e-56	214.00
IUUC-Aor-010067	Aspergillus oryzae	46.69	9.00e-58	218.00
IUUC-Ate-010515	Aspergillus terreus	47.04	1.00e-57	217.00
IUUC-Ame-011842	Astyanax mexicanus	79.47	0.00e+00	786.00
IUUC-Bgr-012204	Blumeria graminis	35.44	1.00e-65	244.00
IUUC-Bta-013525	Bos taurus	96.21	0.00e+00	1125.00
IUUC-Bci-013842	Botrytis cinerea	46.07	5.00e-50	191.00
IUUC-Bdi-014436	Brachypodium distachyon	36.40	7.00e-74	271.00
IUUC-Bol-015903	Brassica oleracea	44.11	3.00e-53	203.00
IUUC-Bra-017856	Brassica rapa	36.83	1.00e-55	211.00
IUUC-Cel-018261	Caenorhabditis elegans	50.69	2.00e-81	296.00
IUUC-Cja-018989	Callithrix jacchus	96.62	0.00e+00	1122.00
IUUC-Cfa-020629	Canis familiaris	95.95	0.00e+00	1122.00
IUUC-Cpo-021759	Cavia porcellus	95.84	0.00e+00	1113.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	38.93	2.00e-22	100.00
IUUC-Csa-023750	Chlorocebus sabaeus	97.02	0.00e+00	1125.00
IUUC-Cho-024581	Choloepus hoffmanni	98.15	7.00e-123	434.00
IUUC-Cin-025640	Ciona intestinalis	57.66	9.00e-148	517.00
IUUC-Csv-025855	Ciona savignyi	55.74	8.00e-143	500.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	42.27	5.00e-46	178.00
IUUC-Cne-026952	Cryptococcus neoformans	40.59	9.00e-50	191.00
IUUC-Dre-028055	Danio rerio	82.72	0.00e+00	760.00
IUUC-Dno-029259	Dasypus novemcinctus	95.96	0.00e+00	1123.00
IUUC-Dor-031081	Dipodomys ordii	95.72	0.00e+00	1120.00
IUUC-Dse-031438	Dothistroma septosporum	39.37	4.00e-48	186.00
IUUC-Dme-031975	Drosophila melanogaster	60.00	1.00e-147	516.00
IUUC-Ete-033177	Echinops telfairi	93.71	0.00e+00	890.00
IUUC-Eca-033670	Equus caballus	96.24	0.00e+00	1132.00
IUUC-Eeu-035100	Erinaceus europaeus	93.57	0.00e+00	700.00
IUUC-Fca-036176	Felis catus	95.95	0.00e+00	1123.00
IUUC-Fal-036776	Ficedula albicollis	89.64	0.00e+00	914.00
IUUC-Fox-037706	Fusarium oxysporum	40.83	7.00e-49	188.00
IUUC-Fso-038313	Fusarium solani	42.39	4.00e-45	176.00
IUUC-Gmo-038887	Gadus morhua	81.03	0.00e+00	784.00
IUUC-Ggr-039932	Gaeumannomyces graminis	38.02	8.00e-35	141.00
IUUC-Gga-041184	Gallus gallus	89.54	0.00e+00	911.00
IUUC-Gac-042118	Gasterosteus aculeatus	81.15	0.00e+00	984.00
IUUC-Gma-042726	Glycine max	39.53	4.00e-82	299.00
IUUC-Hsa-045751	Homo sapiens	97.13	0.00e+00	1116.00
IUUC-Hvu-047702	Hordeum vulgare	32.84	1.00e-30	127.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	96.11	0.00e+00	1131.00
IUUC-Kpa-049400	Komagataella pastoris	29.31	5.00e-31	128.00
IUUC-Lch-050152	Latimeria chalumnae	83.70	0.00e+00	901.00
IUUC-Lpe-051570	Leersia perrieri	45.78	8.00e-33	135.00
IUUC-Loc-051753	Lepisosteus oculatus	85.26	0.00e+00	809.00
IUUC-Lma-053219	Leptosphaeria maculans	36.58	1.00e-34	140.00
IUUC-Laf-053643	Loxodonta africana	96.11	0.00e+00	1090.00
IUUC-Mcc-055091	Macaca mulatta	96.89	0.00e+00	1125.00
IUUC-Meu-056036	Macropus eugenii	83.42	0.00e+00	792.00
IUUC-Mor-057214	Magnaporthe oryzae	37.36	4.00e-35	142.00
IUUC-Mpo-057385	Magnaporthe poae	30.00	1.00e-12	67.00
IUUC-Mtr-057954	Medicago truncatula	38.45	1.00e-81	298.00
IUUC-Mla-059020	Melampsora laricipopulina	36.42	9.00e-49	188.00
IUUC-Mga-060176	Meleagris gallopavo	90.87	0.00e+00	940.00
IUUC-Mvi-060278	Microbotryum violaceum	38.51	5.00e-53	202.00
IUUC-Mmr-061602	Microcebus murinus	96.37	0.00e+00	1142.00
IUUC-Mdo-062047	Monodelphis domestica	93.63	0.00e+00	1057.00
IUUC-Mmu-063377	Mus musculus	94.06	0.00e+00	1114.00
IUUC-Mac-065644	Musa acuminata	46.30	7.00e-61	228.00
IUUC-Mpu-066047	Mustela putorius furo	95.85	0.00e+00	1132.00
IUUC-Mlu-067039	Myotis lucifugus	95.98	0.00e+00	1098.00
IUUC-Nfi-068434	Neosartorya fischeri	45.96	4.00e-53	202.00
IUUC-Ncr-068912	Neurospora crassa	39.41	3.00e-39	156.00
IUUC-Nle-069540	Nomascus leucogenys	97.02	0.00e+00	1125.00
IUUC-Opr-071157	Ochotona princeps	95.58	0.00e+00	1104.00
IUUC-Ont-072229	Oreochromis niloticus	89.18	0.00e+00	769.00
IUUC-Oan-073616	Ornithorhynchus anatinus	98.23	3.00e-33	134.00
IUUC-Ocu-074002	Oryctolagus cuniculus	95.96	0.00e+00	1125.00
IUUC-Oba-075659	Oryza barthii	33.73	1.00e-34	140.00
IUUC-Obr-076465	Oryza brachyantha	46.25	8.00e-34	138.00
IUUC-Ogl-077461	Oryza glaberrima	37.08	3.00e-53	203.00
IUUC-Ogu-078515	Oryza glumaepatula	38.02	4.00e-53	202.00
IUUC-Oin-080201	Oryza indica	46.88	2.00e-33	137.00
IUUC-Olo-080751	Oryza longistaminata	33.73	1.00e-34	141.00
IUUC-Ome-081201	Oryza meridionalis	36.31	1.00e-74	275.00
IUUC-Oni-082951	Oryza nivara	46.88	3.00e-33	137.00
IUUC-Opu-083560	Oryza punctata	34.73	6.00e-64	238.00
IUUC-Oru-084440	Oryza rufipogon	37.08	3.00e-53	203.00
IUUC-Osa-085699	Oryza sativa	37.08	3.00e-53	203.00
IUUC-Ola-086705	Oryzias latipes	78.88	0.00e+00	940.00
IUUC-Olu-087794	Ostreococcus lucimarinus	36.27	2.00e-62	233.00
IUUC-Oga-088896	Otolemur garnettii	96.50	0.00e+00	1122.00
IUUC-Oar-090155	Ovis aries	98.15	0.00e+00	879.00
IUUC-Ptr-090754	Pan troglodytes	97.00	0.00e+00	1114.00
IUUC-Pan-092464	Papio anubis	97.02	0.00e+00	1125.00
IUUC-Psi-093166	Pelodiscus sinensis	93.89	0.00e+00	741.00
IUUC-Pma-094280	Petromyzon marinus	85.04	2.00e-128	452.00
IUUC-Pno-095106	Phaeosphaeria nodorum	37.59	2.00e-31	130.00
IUUC-Ppa-095510	Physcomitrella patens	47.12	6.00e-57	215.00
IUUC-Pfo-096212	Poecilia formosa	79.76	8.00e-175	607.00
IUUC-Pab-098482	Pongo abelii	97.02	0.00e+00	1125.00
IUUC-Pop-099479	Populus trichocarpa	44.15	3.00e-56	213.00
IUUC-Pca-100776	Procavia capensis	88.61	5.00e-77	282.00
IUUC-Ppe-101626	Prunus persica	36.87	8.00e-76	278.00
IUUC-Pva-102981	Pteropus vampyrus	95.03	0.00e+00	1057.00
IUUC-Pgr-103503	Puccinia graminis	33.68	7.00e-69	255.00
IUUC-Ptt-103994	Puccinia triticina	39.31	9.00e-47	182.00
IUUC-Pte-104226	Pyrenophora teres	35.40	3.00e-36	145.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	36.24	7.00e-39	155.00
IUUC-Rno-105225	Rattus norvegicus	93.90	0.00e+00	1110.00
IUUC-Sce-106278	Saccharomyces cerevisiae	22.94	6.00e-11	61.20
IUUC-Sha-107353	Sarcophilus harrisii	91.36	0.00e+00	1001.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	35.78	4.00e-61	228.00
IUUC-Spo-108266	Schizosaccharomyces pombe	41.98	5.00e-52	198.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	45.74	3.00e-54	206.00
IUUC-Smo-109675	Selaginella moellendorffii	45.00	1.00e-51	197.00
IUUC-Sit-110019	Setaria italica	45.28	6.00e-33	135.00
IUUC-Sly-111621	Solanum lycopersicum	45.65	4.00e-63	236.00
IUUC-Stu-112703	Solanum tuberosum	46.35	1.00e-63	238.00
IUUC-Sar-113166	Sorex araneus	92.62	0.00e+00	1041.00
IUUC-Sbi-114746	Sorghum bicolor	35.96	5.00e-52	199.00
IUUC-Sre-115196	Sporisorium reilianum	40.27	1.00e-50	194.00
IUUC-Ssc-115573	Sus scrofa	96.08	0.00e+00	1125.00
IUUC-Tgu-117284	Taeniopygia guttata	90.77	0.00e+00	931.00
IUUC-Tru-118236	Takifugu rubripes	82.12	0.00e+00	723.00
IUUC-Tsy-119219	Tarsius syrichta	92.96	0.00e+00	1008.00
IUUC-Tni-119929	Tetraodon nigroviridis	84.39	9.00e-101	360.00
IUUC-Tca-121156	Theobroma cacao	44.59	3.00e-61	230.00
IUUC-Tre-122179	Trichoderma reesei	42.24	1.00e-44	174.00
IUUC-Tvi-122326	Trichoderma virens	40.85	1.00e-47	184.00
IUUC-Tae-124733	Triticum aestivum	34.81	3.00e-71	263.00
IUUC-Tur-126352	Triticum urartu	35.49	8.00e-49	188.00
IUUC-Tme-126996	Tuber melanosporum	42.80	1.00e-51	197.00
IUUC-Tbe-127271	Tupaia belangeri	88.59	0.00e+00	981.00
IUUC-Ttr-128433	Tursiops truncatus	94.13	0.00e+00	1118.00
IUUC-Uma-129357	Ustilago maydis	31.08	2.00e-47	183.00
IUUC-Vda-130010	Verticillium dahliae	40.50	2.00e-42	166.00
IUUC-Vvi-131734	Vitis vinifera	46.29	3.00e-63	236.00
IUUC-Xtr-132013	Xenopus tropicalis	84.24	0.00e+00	994.00
IUUC-Xma-134244	Xiphophorus maculatus	80.20	0.00e+00	731.00
IUUC-Yli-134579	Yarrowia lipolytica	36.29	2.00e-32	133.00
IUUC-Zma-135600	Zea mays	35.96	2.00e-51	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence