iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069503

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01032588

Gene Name

RFWD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000008003.2	ENSNLET00000010229.2	ENSNLEP00000009758.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-09	35.6	495	533

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           H   +++laf s   +ll+s+s D+tik+ +l t+++++
   Q: 495  HGKQIRGLAFsSYlrGLLLSASLDNTIKLTSLETNTVVQ 533
           8889******8445599***********98888877766 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAHEAMEYDL QVQLNHAEEQ PAPAGMASSQ GGPALLQPVP ADMVSSQGVP SILQPAPAEV 60
IGSQATPPLL QPAPQLSIDL TEVEVLGEDN VENINPRTSE QRRQGSDANH TIPASSLHSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCAATAGG AGCATGCCTG CCGGCGGCTC TGGCGGGAGC ATGAGCAGCT CCGGAAGTGG 60
CAGTTGGCGT AGGTGCTTTC GGAGTTCGGC CGAGGTAACT ACCGAGTCTT CGGCGGGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031571--P:mitotic G1 DNA damage checkpoint
GO:2000001--P:regulation of DNA damage checkpoint
GO:0010212--P:response to ionizing radiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000929	Aegilops tauschii	23.09	1.00e-13	71.20
IUUC-Aml-001188	Ailuropoda melanoleuca	74.87	0.00e+00	1069.00
IUUC-Atr-003034	Amborella trichopoda	26.86	5.00e-17	81.60
IUUC-Apl-003182	Anas platyrhynchos	57.88	0.00e+00	658.00
IUUC-Aca-004619	Anolis carolinensis	64.57	0.00e+00	676.00
IUUC-Aly-006391	Arabidopsis lyrata	26.25	5.00e-25	109.00
IUUC-Ath-007300	Arabidopsis thaliana	41.98	9.00e-15	75.50
IUUC-Ame-010890	Astyanax mexicanus	55.87	2.00e-165	575.00
IUUC-Bta-013051	Bos taurus	70.36	0.00e+00	984.00
IUUC-Bdi-014519	Brachypodium distachyon	26.96	3.00e-19	89.70
IUUC-Bol-015271	Brassica oleracea	29.02	7.00e-28	119.00
IUUC-Bra-017931	Brassica rapa	27.76	2.00e-27	117.00
IUUC-Cja-019240	Callithrix jacchus	83.87	0.00e+00	1197.00
IUUC-Cfa-021010	Canis familiaris	72.97	0.00e+00	1056.00
IUUC-Cpo-022308	Cavia porcellus	69.21	0.00e+00	911.00
IUUC-Csa-023501	Chlorocebus sabaeus	92.76	0.00e+00	1410.00
IUUC-Cho-024900	Choloepus hoffmanni	64.48	0.00e+00	931.00
IUUC-Cin-025403	Ciona intestinalis	34.52	6.00e-87	315.00
IUUC-Csv-025819	Ciona savignyi	37.11	1.00e-44	173.00
IUUC-Cme-027123	Cyanidioschyzon merolae	41.38	5.00e-13	69.30
IUUC-Dre-028354	Danio rerio	54.18	6.00e-154	537.00
IUUC-Dno-029400	Dasypus novemcinctus	69.72	0.00e+00	992.00
IUUC-Dor-030320	Dipodomys ordii	73.71	0.00e+00	836.00
IUUC-Dme-031949	Drosophila melanogaster	25.79	1.00e-25	111.00
IUUC-Ete-032691	Echinops telfairi	52.38	1.00e-121	430.00
IUUC-Eca-034320	Equus caballus	76.71	0.00e+00	1155.00
IUUC-Fca-035732	Felis catus	73.98	0.00e+00	1018.00
IUUC-Fal-036648	Ficedula albicollis	65.44	0.00e+00	671.00
IUUC-Gmo-038609	Gadus morhua	54.11	6.00e-126	444.00
IUUC-Gga-040522	Gallus gallus	61.54	5.00e-90	324.00
IUUC-Gac-042318	Gasterosteus aculeatus	59.26	4.00e-126	444.00
IUUC-Gma-043184	Glycine max	40.00	2.00e-14	74.30
IUUC-Ggo-044464	Gorilla gorilla	93.93	0.00e+00	1411.00
IUUC-Hsa-045991	Homo sapiens	93.93	0.00e+00	1403.00
IUUC-Hvu-047705	Hordeum vulgare	23.33	9.00e-24	105.00
IUUC-Itr-047977	Ictidomys tridecemlineatus	76.29	0.00e+00	1096.00
IUUC-Lch-050112	Latimeria chalumnae	60.39	2.00e-177	615.00
IUUC-Lpe-051605	Leersia perrieri	26.02	5.00e-16	79.70
IUUC-Loc-052241	Lepisosteus oculatus	59.43	5.00e-169	587.00
IUUC-Laf-054559	Loxodonta africana	70.59	0.00e+00	885.00
IUUC-Mcc-055093	Macaca mulatta	92.12	0.00e+00	1379.00
IUUC-Meu-056417	Macropus eugenii	65.23	0.00e+00	675.00
IUUC-Mtr-058533	Medicago truncatula	24.35	2.00e-30	126.00
IUUC-Mga-059498	Meleagris gallopavo	57.21	0.00e+00	655.00
IUUC-Mmr-061782	Microcebus murinus	73.50	0.00e+00	1076.00
IUUC-Mdo-062053	Monodelphis domestica	66.67	0.00e+00	691.00
IUUC-Mmu-063352	Mus musculus	63.50	0.00e+00	926.00
IUUC-Mac-064582	Musa acuminata	26.51	2.00e-19	90.50
IUUC-Mpu-066087	Mustela putorius furo	72.88	0.00e+00	1066.00
IUUC-Mlu-068147	Myotis lucifugus	71.68	0.00e+00	969.00
IUUC-Opr-070479	Ochotona princeps	68.04	0.00e+00	980.00
IUUC-Ont-071700	Oreochromis niloticus	55.27	1.00e-161	563.00
IUUC-Oan-073702	Ornithorhynchus anatinus	69.15	0.00e+00	713.00
IUUC-Ocu-074886	Oryctolagus cuniculus	70.93	0.00e+00	1041.00
IUUC-Oba-075729	Oryza barthii	28.04	5.00e-22	99.40
IUUC-Obr-076562	Oryza brachyantha	26.21	3.00e-19	89.70
IUUC-Ogl-077615	Oryza glaberrima	28.04	5.00e-22	99.40
IUUC-Ogu-078921	Oryza glumaepatula	27.70	3.00e-21	96.70
IUUC-Oin-079250	Oryza indica	25.89	4.00e-17	82.80
IUUC-Olo-080758	Oryza longistaminata	27.61	3.00e-22	99.80
IUUC-Ome-081707	Oryza meridionalis	26.54	6.00e-19	89.00
IUUC-Oni-083006	Oryza nivara	27.70	4.00e-21	96.30
IUUC-Opu-083650	Oryza punctata	26.92	7.00e-22	98.60
IUUC-Oru-084924	Oryza rufipogon	27.49	2.00e-21	97.40
IUUC-Osa-085820	Oryza sativa	27.70	6.00e-21	95.90
IUUC-Ola-087229	Oryzias latipes	62.82	1.00e-131	462.00
IUUC-Oga-088243	Otolemur garnettii	70.20	0.00e+00	981.00
IUUC-Oar-089461	Ovis aries	72.47	0.00e+00	1068.00
IUUC-Ptr-090527	Pan troglodytes	94.06	0.00e+00	1401.00
IUUC-Pan-092431	Papio anubis	92.02	0.00e+00	1310.00
IUUC-Psi-093156	Pelodiscus sinensis	52.08	0.00e+00	708.00
IUUC-Ppa-095305	Physcomitrella patens	49.38	6.00e-19	89.70
IUUC-Pfo-097065	Poecilia formosa	54.49	1.00e-155	543.00
IUUC-Pab-098272	Pongo abelii	94.06	0.00e+00	1434.00
IUUC-Pop-099827	Populus trichocarpa	30.39	2.00e-34	140.00
IUUC-Pca-100713	Procavia capensis	63.32	0.00e+00	902.00
IUUC-Ppe-102103	Prunus persica	25.19	8.00e-30	125.00
IUUC-Pva-103133	Pteropus vampyrus	80.66	0.00e+00	670.00
IUUC-Sha-107628	Sarcophilus harrisii	54.06	0.00e+00	745.00
IUUC-Sit-109891	Setaria italica	24.37	4.00e-24	105.00
IUUC-Sly-111779	Solanum lycopersicum	32.08	2.00e-30	127.00
IUUC-Stu-112817	Solanum tuberosum	48.78	1.00e-18	86.30
IUUC-Sar-113124	Sorex araneus	62.02	0.00e+00	667.00
IUUC-Sbi-114107	Sorghum bicolor	24.81	3.00e-25	109.00
IUUC-Ssc-115850	Sus scrofa	72.99	0.00e+00	1046.00
IUUC-Tgu-117295	Taeniopygia guttata	65.23	0.00e+00	683.00
IUUC-Tru-117539	Takifugu rubripes	52.79	1.00e-155	542.00
IUUC-Tsy-118805	Tarsius syrichta	70.59	4.00e-97	348.00
IUUC-Tni-120274	Tetraodon nigroviridis	55.13	2.00e-156	545.00
IUUC-Tca-121162	Theobroma cacao	30.09	3.00e-27	117.00
IUUC-Tae-124822	Triticum aestivum	23.43	2.00e-24	106.00
IUUC-Tur-126162	Triticum urartu	24.73	1.00e-14	75.10
IUUC-Tbe-127884	Tupaia belangeri	61.67	2.00e-65	243.00
IUUC-Ttr-128665	Tursiops truncatus	68.41	0.00e+00	923.00
IUUC-Uma-129349	Ustilago maydis	33.33	2.00e-06	47.40
IUUC-Vpa-130385	Vicugna pacos	76.58	0.00e+00	1073.00
IUUC-Vvi-131464	Vitis vinifera	36.90	4.00e-14	72.80
IUUC-Xtr-132015	Xenopus tropicalis	57.66	0.00e+00	652.00
IUUC-Xma-133109	Xiphophorus maculatus	54.71	2.00e-155	542.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence