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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006584
Ensembl Protein ID AT2G05630.2
UniProt Accession Q9SL04; Q8LBA9; ATG8D_ARATH
Genbank Protein ID BAB88390.1; AAD24645.1; AEC05958.1; AAO23655.1; BAE99350.1; AAM64870.1
Protein Name Autophagy-related protein 8d; Autophagy-related ubiquitin-like modifier ATG8d
Genbank Nucleotide ID AB073178; AC006220; CP002685; BT003090; AK227339; AY087320
Gene Name ATG8D; APG8D; At2g05630; T20G20.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G05630 AT2G05630.2 AT2G05630.2
AT2G05630 AT2G05630.1 AT2G05630.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/ATG8 2.30e-47 160.4 58 161
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/ATG8
   S: 1    krkeevekirdkfpdkiPvivekakkekipeldkkkylvPsdltvgqlvkiirkrlqlraedalfllvnnslvsvsatlaeiyeeekdedgflyvaya 98
           kr++e+++ir+k+pd+iPvive+a+k+++p++d+kkylvP+dltvgq+v+++rkr++l +e+a+f++v n l++++a +++iyee+kdedgfly++y+
   Q: 58   KRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYS 155
           699*********************************************************************************************** PP
   S: 99   seetfG 104
           +e+tfG
   Q: 156  GENTFG 161
           *****9 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
 Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
Protein Sequence
(Fasta)
MAISSFKHEH PLVEMNIDVE VTKFHLSLLC SVVESLLFTG RRIAISVPWN PKILSLKKRQ 60
AEAARIREKY PDRIPVIVER AEKSDVPDID RKKYLVPADL TVGQFVYVVR KRIKLSPEKA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006584|ULD,ATG8|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATAAACATTC CAAATAACTA TCTCCATTCT TTGGAGTTAC CCAATTTCGA CGTTGAACAC 60
AAACCCTTGC TTCTCTCTTC TCTGTTTCTC TCTCGCAGCG AAAAATCATG GCGATTAGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006584|ULD,ATG8|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0206--Cytoskeleton
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0493--Microtubule
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0833--Ubl conjugation pathway
KW-0926--Vacuole
Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom
Pfam

PF02991--Atg8
Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0031410--C:cytoplasmic vesicle
GO:0005874--C:microtubule
GO:0006914--P:autophagy
GO:0015031--P:protein transport
KEGG ath:AT2G05630
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005987 Arabidopsis lyrata 71.34 1.00e-59 220.00
IUUC-Bra-016921 Brassica rapa 96.30 6.00e-58 214.00
Created Date 25-Jun-2017

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