iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134626

Ensembl Protein ID

CAG80193

UniProt Accession

Q6C423; JHD1_YARLI

Genbank Protein ID

CAG80193.1

Protein Name

JmjC domain-containing histone demethylation protein 1; [Histone-H3]-lysine-36 demethylase 1

Genbank Nucleotide ID

CR382131

Gene Name

JHD1; YALI0E30393g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_E30393g	CAG80193	CAG80193

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	40.27	1.00e-56	218.00	IUUC-Dme-032039

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Yarrowia lipolytica

Functional Description
(View)

Histone demethylase that specifically demethylates 'Lys-36' of histone H3, thereby playing a central role in histone code.

Protein Sequence
(Fasta)

MPNRCDFCTS SSTKDKQQWT QCDGCDRWVH DVCVSITDPV SYAKYHCPTC TKTKGPSLYK 60
RQSKRKKIDI DYAAMHSGNV DMSLRTRHVH SSRFTDVAAS AQNKEPFKRV SGTELTLDWA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCAACC GTTGCGACTT TTGTACCAGC AGTTCCACCA AGGATAAACA GCAGTGGACA 60
CAATGCGATG GCTGTGATAG ATGGGTACAT GACGTGTGCG TCAGCATAAC AGACCCCGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0223--Dioxygenase
KW-0408--Iron
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0560--Oxidoreductase
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0051864--F:histone demethylase activity (H3-K36 specific)
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

yli:YALI0E30393g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001165	Aegilops tauschii	42.11	5.00e-05	39.70
IUUC-Aml-002427	Ailuropoda melanoleuca	35.66	1.00e-59	222.00
IUUC-Atr-002475	Amborella trichopoda	37.74	4.00e-06	43.10
IUUC-Apl-003787	Anas platyrhynchos	42.25	1.00e-54	206.00
IUUC-Aca-004346	Anolis carolinensis	35.92	9.00e-61	226.00
IUUC-Aly-005868	Arabidopsis lyrata	34.62	5.00e-05	39.30
IUUC-Ath-007447	Arabidopsis thaliana	36.54	2.00e-05	40.40
IUUC-Ago-007912	Ashbya gossypii	35.03	4.00e-63	233.00
IUUC-Acl-008303	Aspergillus clavatus	39.95	3.00e-83	301.00
IUUC-Afl-008579	Aspergillus flavus	34.65	9.00e-43	166.00
IUUC-Afu-008903	Aspergillus fumigatus	37.35	1.00e-83	303.00
IUUC-Ani-009279	Aspergillus nidulans	41.31	3.00e-87	315.00
IUUC-Ang-009645	Aspergillus niger	41.36	5.00e-86	310.00
IUUC-Aor-010233	Aspergillus oryzae	40.47	2.00e-85	308.00
IUUC-Ate-010345	Aspergillus terreus	41.31	4.00e-86	311.00
IUUC-Ame-010945	Astyanax mexicanus	36.36	4.00e-62	231.00
IUUC-Bta-013531	Bos taurus	42.36	7.00e-56	211.00
IUUC-Bdi-014599	Brachypodium distachyon	38.98	5.00e-07	46.20
IUUC-Bol-016540	Brassica oleracea	34.85	2.00e-06	46.20
IUUC-Bra-017743	Brassica rapa	33.33	9.00e-06	41.60
IUUC-Cel-018303	Caenorhabditis elegans	37.94	3.00e-46	178.00
IUUC-Cja-018757	Callithrix jacchus	31.91	4.00e-54	204.00
IUUC-Cfa-021156	Canis familiaris	35.70	1.00e-59	222.00
IUUC-Cpo-022284	Cavia porcellus	36.60	4.00e-60	224.00
IUUC-Cre-022852	Chlamydomonas reinhardtii	26.97	1.00e-03	37.40
IUUC-Csa-023515	Chlorocebus sabaeus	36.07	1.00e-59	223.00
IUUC-Cho-024541	Choloepus hoffmanni	34.43	2.00e-33	136.00
IUUC-Cin-025140	Ciona intestinalis	41.57	1.00e-50	192.00
IUUC-Csv-025861	Ciona savignyi	41.61	2.00e-55	209.00
IUUC-Cne-026797	Cryptococcus neoformans	35.15	6.00e-45	174.00
IUUC-Cme-027118	Cyanidioschyzon merolae	33.90	2.00e-42	165.00
IUUC-Dre-028423	Danio rerio	36.90	4.00e-62	231.00
IUUC-Dno-029446	Dasypus novemcinctus	36.34	7.00e-61	226.00
IUUC-Dor-030736	Dipodomys ordii	41.11	4.00e-54	204.00
IUUC-Dse-031402	Dothistroma septosporum	38.90	2.00e-87	315.00
IUUC-Dme-032039	Drosophila melanogaster	40.27	5.00e-58	218.00
IUUC-Ete-032380	Echinops telfairi	36.07	5.00e-60	224.00
IUUC-Eca-034302	Equus caballus	36.53	7.00e-60	223.00
IUUC-Eeu-035273	Erinaceus europaeus	46.29	3.00e-41	162.00
IUUC-Fca-035578	Felis catus	36.07	7.00e-60	223.00
IUUC-Fal-037589	Ficedula albicollis	42.01	2.00e-55	209.00
IUUC-Fox-037812	Fusarium oxysporum	25.86	5.00e-04	37.00
IUUC-Fso-038446	Fusarium solani	27.59	7.00e-04	36.20
IUUC-Gmo-038789	Gadus morhua	34.03	9.00e-60	223.00
IUUC-Ggr-039960	Gaeumannomyces graminis	29.41	2.00e-03	35.40
IUUC-Gga-040633	Gallus gallus	32.82	2.00e-52	197.00
IUUC-Gac-041914	Gasterosteus aculeatus	39.83	3.00e-60	225.00
IUUC-Gma-043719	Glycine max	37.74	6.00e-06	42.40
IUUC-Ggo-044712	Gorilla gorilla	36.68	8.00e-60	223.00
IUUC-Hsa-045724	Homo sapiens	36.34	4.00e-60	224.00
IUUC-Hvu-047100	Hordeum vulgare	42.11	3.00e-05	40.00
IUUC-Itr-048908	Ictidomys tridecemlineatus	46.67	4.00e-07	48.10
IUUC-Kpa-049384	Komagataella pastoris	38.67	2.00e-81	294.00
IUUC-Lch-049793	Latimeria chalumnae	35.73	3.00e-62	231.00
IUUC-Lpe-050738	Leersia perrieri	36.54	8.00e-06	42.00
IUUC-Loc-051927	Lepisosteus oculatus	35.62	2.00e-57	216.00
IUUC-Lma-053190	Leptosphaeria maculans	39.77	3.00e-83	301.00
IUUC-Laf-053656	Loxodonta africana	36.60	4.00e-60	224.00
IUUC-Mcc-055658	Macaca mulatta	36.07	1.00e-59	223.00
IUUC-Meu-056259	Macropus eugenii	38.62	1.00e-49	190.00
IUUC-Mor-057044	Magnaporthe oryzae	29.17	1.40e-02	32.30
IUUC-Mpo-057588	Magnaporthe poae	31.25	2.00e-03	35.40
IUUC-Mtr-058517	Medicago truncatula	37.74	6.00e-06	42.40
IUUC-Mla-058890	Melampsora laricipopulina	45.68	5.00e-66	242.00
IUUC-Mga-059671	Meleagris gallopavo	42.25	2.00e-54	206.00
IUUC-Mvi-060481	Microbotryum violaceum	37.74	1.00e-73	269.00
IUUC-Mmr-060993	Microcebus murinus	36.07	6.00e-60	224.00
IUUC-Mdo-062097	Monodelphis domestica	35.66	2.00e-60	225.00
IUUC-Mmu-063909	Mus musculus	35.73	1.00e-60	226.00
IUUC-Mac-064462	Musa acuminata	41.51	3.00e-07	46.60
IUUC-Mpu-066429	Mustela putorius furo	36.07	8.00e-60	223.00
IUUC-Mlu-067746	Myotis lucifugus	35.39	9.00e-59	220.00
IUUC-Nfi-068537	Neosartorya fischeri	40.19	2.00e-83	302.00
IUUC-Nle-070143	Nomascus leucogenys	36.34	3.00e-60	225.00
IUUC-Opr-070225	Ochotona princeps	42.36	1.00e-52	199.00
IUUC-Ont-072257	Oreochromis niloticus	33.49	1.00e-60	226.00
IUUC-Oan-073654	Ornithorhynchus anatinus	35.09	1.00e-58	219.00
IUUC-Ocu-074417	Oryctolagus cuniculus	36.60	3.00e-60	224.00
IUUC-Oba-075021	Oryza barthii	36.54	3.00e-05	40.00
IUUC-Obr-076539	Oryza brachyantha	33.96	9.00e-04	35.80
IUUC-Ogl-077422	Oryza glaberrima	36.54	4.00e-05	39.70
IUUC-Ogu-079021	Oryza glumaepatula	36.54	4.00e-05	40.00
IUUC-Oin-079801	Oryza indica	36.54	3.00e-05	40.00
IUUC-Olo-080963	Oryza longistaminata	36.54	3.00e-05	40.00
IUUC-Ome-081881	Oryza meridionalis	36.54	4.00e-05	39.70
IUUC-Oni-082314	Oryza nivara	36.54	3.00e-05	40.00
IUUC-Opu-083359	Oryza punctata	36.54	4.00e-05	39.70
IUUC-Oru-085108	Oryza rufipogon	36.54	5.00e-05	39.30
IUUC-Osa-086138	Oryza sativa	42.11	4.00e-05	39.70
IUUC-Ola-087502	Oryzias latipes	34.03	1.00e-61	229.00
IUUC-Oga-088662	Otolemur garnettii	36.07	4.00e-60	224.00
IUUC-Oar-090332	Ovis aries	36.07	8.00e-60	223.00
IUUC-Ptr-091646	Pan troglodytes	36.34	1.00e-60	226.00
IUUC-Pan-092122	Papio anubis	36.07	1.00e-59	223.00
IUUC-Psi-093382	Pelodiscus sinensis	38.53	2.00e-55	209.00
IUUC-Pma-094621	Petromyzon marinus	33.41	3.00e-63	233.00
IUUC-Pno-094984	Phaeosphaeria nodorum	40.81	8.00e-83	300.00
IUUC-Ppa-095609	Physcomitrella patens	36.13	1.00e-53	201.00
IUUC-Pfo-096695	Poecilia formosa	42.91	3.00e-61	228.00
IUUC-Pab-097907	Pongo abelii	42.71	2.00e-56	212.00
IUUC-Pop-099078	Populus trichocarpa	38.46	1.00e-05	40.00
IUUC-Pca-100628	Procavia capensis	46.20	4.00e-42	165.00
IUUC-Ppe-101614	Prunus persica	35.85	7.00e-06	42.00
IUUC-Pva-102416	Pteropus vampyrus	42.01	3.00e-52	198.00
IUUC-Pgr-103554	Puccinia graminis	45.74	1.00e-65	242.00
IUUC-Ptt-103859	Puccinia triticina	39.86	8.00e-75	272.00
IUUC-Pte-104241	Pyrenophora teres	39.13	2.00e-80	293.00
IUUC-Pyt-104741	Pyrenophora triticirepentis	39.36	4.00e-81	294.00
IUUC-Rno-105933	Rattus norvegicus	35.73	1.00e-60	226.00
IUUC-Sce-106445	Saccharomyces cerevisiae	35.76	1.00e-65	241.00
IUUC-Sha-106693	Sarcophilus harrisii	42.01	4.00e-52	198.00
IUUC-Sja-107763	Schizosaccharomyces japonicus	34.15	5.00e-48	184.00
IUUC-Spo-108120	Schizosaccharomyces pombe	34.28	4.00e-50	191.00
IUUC-Smo-109024	Selaginella moellendorffii	34.88	6.00e-51	193.00
IUUC-Sit-110440	Setaria italica	42.11	5.00e-05	37.40
IUUC-Sly-111243	Solanum lycopersicum	34.62	2.00e-06	42.00
IUUC-Stu-111932	Solanum tuberosum	38.78	3.00e-05	40.00
IUUC-Sar-113568	Sorex araneus	42.01	7.00e-51	194.00
IUUC-Sbi-113926	Sorghum bicolor	34.43	2.00e-05	38.50
IUUC-Sre-115112	Sporisorium reilianum	35.31	6.00e-72	263.00
IUUC-Ssc-115645	Sus scrofa	36.07	8.00e-60	223.00
IUUC-Tgu-117229	Taeniopygia guttata	42.01	6.00e-55	207.00
IUUC-Tru-118423	Takifugu rubripes	43.39	3.00e-60	224.00
IUUC-Tsy-119214	Tarsius syrichta	36.87	1.00e-60	226.00
IUUC-Tni-119736	Tetraodon nigroviridis	35.90	2.00e-59	222.00
IUUC-Tca-121204	Theobroma cacao	37.74	3.00e-06	43.10
IUUC-Tre-122185	Trichoderma reesei	27.59	1.00e-03	35.80
IUUC-Tvi-122269	Trichoderma virens	29.31	2.00e-03	35.00
IUUC-Tae-125833	Triticum aestivum	34.55	2.00e-05	40.80
IUUC-Tme-127054	Tuber melanosporum	37.53	6.00e-68	250.00
IUUC-Tbe-128138	Tupaia belangeri	39.50	5.00e-51	194.00
IUUC-Ttr-129014	Tursiops truncatus	34.26	1.00e-49	189.00
IUUC-Uma-129458	Ustilago maydis	34.69	3.00e-72	264.00
IUUC-Vpa-130655	Vicugna pacos	38.89	3.00e-44	172.00
IUUC-Vvi-131738	Vitis vinifera	39.62	2.00e-06	43.50
IUUC-Xtr-132307	Xenopus tropicalis	35.53	7.00e-59	220.00
IUUC-Xma-134323	Xiphophorus maculatus	34.03	5.00e-61	227.00
IUUC-Zma-134690	Zea mays	35.19	5.00e-05	40.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence