iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049305

Ensembl Protein ID

CAY70879

UniProt Accession

C4R5P3; C4R5P3_KOMPG

Genbank Protein ID

CAY70879.1

Protein Name

Essential component of the nuclear pore complex, which mediates nuclear import and export

Genbank Nucleotide ID

FN392321

Gene Name

PAS_chr3_0825

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr3_0825	CAY70879	CAY70879

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	42.46	1.00e-89	325.00	IUUC-Sce-106131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MSGSGFSFSG SGQGNTGFSF GNSQNASKPS LFGNQPANTS NANNTQTSSG GPFGQANAPA 60
DGAKANSSLF GTQSSNQGSI FGSAAQGNAA GGSNTGSTGA FSFGNNQPAS NNATAPTNNT 120

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Nucleotide Sequence
(Fasta)

ATGTCTGGAT CAGGGTTCAG TTTCTCAGGC TCTGGCCAAG GAAATACAGG GTTCTCATTT 60
GGTAACTCCC AGAACGCCTC CAAGCCCTCA TTGTTTGGAA ATCAGCCTGC CAATACTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR024429--Endosialidase_N-extension
IPR026010--NSP1/NUP62
IPR025574--Nucleoporin_FG_rpt
IPR007758--Nucleoporin_NSP1_C

Pfam

PF05064--Nsp1_C
PF13634--Nucleoporin_FG

Gene Ontology

GO:0044613--C:nuclear pore central transport channel
GO:0044615--C:nuclear pore nuclear basket
GO:0005487--F:nucleocytoplasmic transporter activity
GO:0005543--F:phospholipid binding
GO:0017056--F:structural constituent of nuclear pore
GO:0097064--P:ncRNA export from nucleus
GO:0006607--P:NLS-bearing protein import into nucleus
GO:0016973--P:poly(A)+ mRNA export from nucleus
GO:0000055--P:ribosomal large subunit export from nucleus
GO:0000056--P:ribosomal small subunit export from nucleus
GO:0006409--P:tRNA export from nucleus

KEGG

ppa:PAS_chr3_0825

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000103	Aegilops tauschii	26.03	2.00e-12	64.30
IUUC-Aml-002215	Ailuropoda melanoleuca	28.22	1.00e-14	72.40
IUUC-Atr-002951	Amborella trichopoda	24.09	1.00e-13	69.70
IUUC-Apl-003795	Anas platyrhynchos	29.21	4.00e-20	90.50
IUUC-Aca-004808	Anolis carolinensis	28.71	4.00e-18	84.00
IUUC-Aly-005471	Arabidopsis lyrata	23.15	9.00e-14	70.10
IUUC-Ath-007120	Arabidopsis thaliana	23.33	2.00e-12	65.90
IUUC-Ago-007770	Ashbya gossypii	37.01	1.00e-54	205.00
IUUC-Acl-008342	Aspergillus clavatus	30.52	1.00e-29	122.00
IUUC-Afl-008407	Aspergillus flavus	31.55	1.00e-29	122.00
IUUC-Ani-009240	Aspergillus nidulans	31.92	9.00e-33	132.00
IUUC-Ang-009754	Aspergillus niger	31.55	9.00e-31	126.00
IUUC-Aor-010138	Aspergillus oryzae	31.55	5.00e-30	124.00
IUUC-Ate-010408	Aspergillus terreus	30.99	8.00e-31	126.00
IUUC-Ame-011356	Astyanax mexicanus	29.21	3.00e-21	94.40
IUUC-Bgr-012171	Blumeria graminis	32.52	2.00e-31	128.00
IUUC-Bta-013564	Bos taurus	31.72	1.00e-03	37.70
IUUC-Bci-013631	Botrytis cinerea	31.88	2.00e-31	129.00
IUUC-Bdi-014451	Brachypodium distachyon	25.11	9.00e-15	71.20
IUUC-Bol-015251	Brassica oleracea	23.15	1.00e-12	66.60
IUUC-Bra-017238	Brassica rapa	23.15	4.00e-13	67.80
IUUC-Cja-019404	Callithrix jacchus	28.22	1.00e-15	75.50
IUUC-Cfa-020656	Canis familiaris	28.22	9.00e-15	72.80
IUUC-Cpo-021577	Cavia porcellus	24.26	2.00e-13	68.60
IUUC-Csa-023298	Chlorocebus sabaeus	28.22	3.00e-14	70.90
IUUC-Cho-024303	Choloepus hoffmanni	31.37	5.00e-05	42.00
IUUC-Cin-025543	Ciona intestinalis	29.05	3.00e-12	64.30
IUUC-Csv-026171	Ciona savignyi	27.14	1.00e-09	55.80
IUUC-Cgl-026616	Colletotrichum gloeosporioides	33.83	3.00e-23	99.40
IUUC-Cne-026912	Cryptococcus neoformans	27.75	3.00e-24	105.00
IUUC-Dre-027936	Danio rerio	28.57	6.00e-18	83.60
IUUC-Dno-029425	Dasypus novemcinctus	24.26	6.00e-14	70.10
IUUC-Dor-030759	Dipodomys ordii	38.24	4.00e-10	57.40
IUUC-Dse-031327	Dothistroma septosporum	27.60	8.00e-22	96.70
IUUC-Dme-031695	Drosophila melanogaster	29.23	2.00e-16	79.70
IUUC-Ete-032242	Echinops telfairi	36.57	1.00e-09	57.40
IUUC-Eca-034163	Equus caballus	27.23	2.00e-15	73.20
IUUC-Fca-035933	Felis catus	25.25	3.00e-15	74.70
IUUC-Fal-036641	Ficedula albicollis	28.57	9.00e-21	92.80
IUUC-Fox-038065	Fusarium oxysporum	36.22	1.00e-30	125.00
IUUC-Fso-038180	Fusarium solani	35.44	2.00e-31	129.00
IUUC-Gmo-038896	Gadus morhua	25.74	1.00e-13	68.60
IUUC-Ggr-040080	Gaeumannomyces graminis	34.47	3.00e-31	127.00
IUUC-Gga-041135	Gallus gallus	29.21	6.00e-20	90.10
IUUC-Gac-041923	Gasterosteus aculeatus	28.10	2.00e-21	95.10
IUUC-Gma-043083	Glycine max	23.72	9.00e-13	66.60
IUUC-Ggo-044765	Gorilla gorilla	28.22	6.00e-15	73.60
IUUC-Hsa-046692	Homo sapiens	28.22	5.00e-15	73.60
IUUC-Itr-048010	Ictidomys tridecemlineatus	28.22	3.00e-15	74.30
IUUC-Lch-050204	Latimeria chalumnae	29.38	3.00e-17	81.30
IUUC-Lpe-050941	Leersia perrieri	34.02	1.00e-10	57.00
IUUC-Loc-051832	Lepisosteus oculatus	26.73	1.00e-17	82.80
IUUC-Laf-054586	Loxodonta africana	27.23	6.00e-18	83.20
IUUC-Mcc-054910	Macaca mulatta	28.22	3.00e-14	70.90
IUUC-Meu-056117	Macropus eugenii	29.66	6.00e-13	64.30
IUUC-Mor-057022	Magnaporthe oryzae	33.84	1.00e-30	125.00
IUUC-Mpo-057380	Magnaporthe poae	34.85	9.00e-31	126.00
IUUC-Mtr-057916	Medicago truncatula	23.64	3.00e-10	56.60
IUUC-Mga-059208	Meleagris gallopavo	29.21	2.00e-19	87.80
IUUC-Mvi-060361	Microbotryum violaceum	35.16	7.00e-15	73.60
IUUC-Mmr-061579	Microcebus murinus	29.06	7.00e-16	76.60
IUUC-Mdo-062211	Monodelphis domestica	28.22	4.00e-16	77.80
IUUC-Mmu-063320	Mus musculus	23.27	1.00e-13	69.30
IUUC-Mac-065316	Musa acuminata	24.75	5.00e-10	57.80
IUUC-Mpu-066778	Mustela putorius furo	28.22	5.00e-15	73.60
IUUC-Mlu-067961	Myotis lucifugus	25.25	1.00e-15	75.50
IUUC-Nfi-068470	Neosartorya fischeri	30.05	5.00e-29	120.00
IUUC-Ncr-068853	Neurospora crassa	35.96	5.00e-32	130.00
IUUC-Nle-069776	Nomascus leucogenys	36.00	4.00e-09	52.00
IUUC-Ont-071804	Oreochromis niloticus	28.10	3.00e-20	91.30
IUUC-Oan-073171	Ornithorhynchus anatinus	30.54	4.00e-20	90.50
IUUC-Ocu-074502	Oryctolagus cuniculus	25.52	5.00e-09	52.40
IUUC-Oba-075227	Oryza barthii	30.85	2.00e-09	53.90
IUUC-Obr-076100	Oryza brachyantha	24.66	3.00e-13	68.60
IUUC-Ogl-077722	Oryza glaberrima	24.20	7.00e-13	65.10
IUUC-Ogu-078656	Oryza glumaepatula	23.66	5.00e-12	62.40
IUUC-Oin-079356	Oryza indica	23.43	5.00e-10	55.80
IUUC-Olo-080776	Oryza longistaminata	25.25	3.00e-11	60.10
IUUC-Ome-081497	Oryza meridionalis	25.25	4.00e-11	59.30
IUUC-Oni-082204	Oryza nivara	24.20	2.00e-12	63.90
IUUC-Opu-083759	Oryza punctata	30.85	4.00e-10	55.10
IUUC-Ola-086898	Oryzias latipes	27.59	2.00e-19	88.20
IUUC-Olu-087583	Ostreococcus lucimarinus	55.88	5.00e-02	32.30
IUUC-Oga-088255	Otolemur garnettii	26.11	1.00e-14	72.40
IUUC-Oar-089798	Ovis aries	23.27	5.00e-12	63.20
IUUC-Ptr-091608	Pan troglodytes	28.22	6.00e-15	73.60
IUUC-Pan-092757	Papio anubis	28.22	3.00e-14	71.20
IUUC-Psi-093357	Pelodiscus sinensis	29.21	9.00e-20	89.70
IUUC-Pma-094710	Petromyzon marinus	27.36	3.00e-13	67.80
IUUC-Pno-094791	Phaeosphaeria nodorum	30.77	2.00e-25	108.00
IUUC-Ppa-095481	Physcomitrella patens	23.50	3.00e-13	68.20
IUUC-Pfo-097470	Poecilia formosa	29.06	1.00e-18	85.90
IUUC-Pab-098408	Pongo abelii	28.22	5.00e-15	73.60
IUUC-Pop-100081	Populus trichocarpa	23.04	3.00e-13	66.20
IUUC-Pca-100349	Procavia capensis	27.72	4.00e-19	87.40
IUUC-Ppe-101825	Prunus persica	25.34	3.00e-13	67.80
IUUC-Pva-102608	Pteropus vampyrus	27.23	2.00e-10	57.00
IUUC-Pgr-103532	Puccinia graminis	31.67	9.00e-30	122.00
IUUC-Pte-104213	Pyrenophora teres	31.10	8.00e-28	116.00
IUUC-Pyt-104505	Pyrenophora triticirepentis	31.10	8.00e-27	113.00
IUUC-Rno-104985	Rattus norvegicus	23.27	2.00e-14	71.20
IUUC-Sce-106131	Saccharomyces cerevisiae	44.68	7.00e-117	412.00
IUUC-Sha-107579	Sarcophilus harrisii	25.25	1.00e-12	64.30
IUUC-Sja-107816	Schizosaccharomyces japonicus	31.37	4.00e-32	130.00
IUUC-Spo-108243	Schizosaccharomyces pombe	30.16	5.00e-31	127.00
IUUC-Sit-110530	Setaria italica	25.11	4.00e-16	77.80
IUUC-Sly-111305	Solanum lycopersicum	23.04	8.00e-13	67.00
IUUC-Sbi-114353	Sorghum bicolor	24.66	2.00e-11	62.00
IUUC-Sre-115119	Sporisorium reilianum	28.50	4.00e-25	107.00
IUUC-Ssc-116032	Sus scrofa	26.11	9.00e-15	72.80
IUUC-Tgu-117392	Taeniopygia guttata	26.11	2.00e-14	71.60
IUUC-Tru-118364	Takifugu rubripes	28.71	2.00e-19	88.20
IUUC-Tsy-119443	Tarsius syrichta	25.73	5.00e-13	67.00
IUUC-Tni-120115	Tetraodon nigroviridis	28.71	9.00e-20	89.40
IUUC-Tca-120955	Theobroma cacao	22.73	2.00e-12	65.90
IUUC-Tre-122173	Trichoderma reesei	33.67	2.00e-26	111.00
IUUC-Tvi-122527	Trichoderma virens	32.84	1.00e-23	100.00
IUUC-Tae-123047	Triticum aestivum	25.11	8.00e-15	73.60
IUUC-Tme-127155	Tuber melanosporum	34.47	3.00e-32	131.00
IUUC-Tbe-127667	Tupaia belangeri	25.79	1.00e-08	51.20
IUUC-Ttr-128589	Tursiops truncatus	28.22	7.00e-16	76.60
IUUC-Vda-129888	Verticillium dahliae	34.18	3.00e-27	114.00
IUUC-Vpa-130367	Vicugna pacos	24.75	6.00e-11	58.90
IUUC-Vvi-131500	Vitis vinifera	25.35	9.00e-14	70.10
IUUC-Xtr-132497	Xenopus tropicalis	29.21	2.00e-20	91.30
IUUC-Xma-133341	Xiphophorus maculatus	28.44	1.00e-19	89.00
IUUC-Yli-134543	Yarrowia lipolytica	37.16	3.00e-40	157.00
IUUC-Zma-135505	Zea mays	23.39	2.00e-15	75.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence