iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114884

Ensembl Protein ID

Sb04g029760.1

UniProt Accession

C5XZU9; C5XZU9_SORBI

Genbank Protein ID

EES05618.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G259300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g029760	Sb04g029760.1	Sb04g029760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.50e-06	27.4	213	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C +Cl++         ++  l+ +C H f+ +C+ +w        +++ s+   CP+Cr
   Q: 213  CGVCLDRVlskptaaeRRFGLLSDCDHSFCISCIRNWrstspTSGMDVNSTLRACPICR 271
           999*99998666655322244577*************99998888888889999****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSRRVPCKFF LHGACFKGDY CEFSHDCNDQ PDNVCTFYQK GACSFGSRCR NEHVEAHRDC 60
PQPATTAARA SPNSSQLVAS SRDPRCSGCQ TDMCDQTQQI CKSTTTLSAH QPAWAVDYHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCACAAAGC TGACCTGCGG AAGCGCGAGG AGGACGAAAG GGACCGGACG AAGCTGCGCG 60
CTGCACCGAC CGACCAAACC CTAGGCGTTC GGCGGGCGTC ACCACGGCGG CGAAGACGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_04g029760

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000297	Aegilops tauschii	51.01	7.00e-79	287.00
IUUC-Aml-001937	Ailuropoda melanoleuca	34.78	2.00e-49	189.00
IUUC-Atr-003024	Amborella trichopoda	54.29	2.00e-110	391.00
IUUC-Apl-004110	Anas platyrhynchos	43.16	2.00e-40	159.00
IUUC-Aca-005385	Anolis carolinensis	34.94	2.00e-53	202.00
IUUC-Aly-006128	Arabidopsis lyrata	50.27	2.00e-103	367.00
IUUC-Ath-006918	Arabidopsis thaliana	49.59	1.00e-94	338.00
IUUC-Ame-011246	Astyanax mexicanus	35.91	6.00e-55	207.00
IUUC-Bta-012318	Bos taurus	35.16	2.00e-50	192.00
IUUC-Bdi-015008	Brachypodium distachyon	62.65	2.00e-116	410.00
IUUC-Bol-015688	Brassica oleracea	51.06	8.00e-84	303.00
IUUC-Bra-017030	Brassica rapa	51.66	5.00e-91	327.00
IUUC-Cel-018642	Caenorhabditis elegans	29.57	4.00e-39	154.00
IUUC-Cja-019550	Callithrix jacchus	43.16	2.00e-40	158.00
IUUC-Cfa-020166	Canis familiaris	35.55	3.00e-51	194.00
IUUC-Cpo-021887	Cavia porcellus	34.77	2.00e-51	195.00
IUUC-Cre-022707	Chlamydomonas reinhardtii	44.04	3.00e-50	191.00
IUUC-Csa-023930	Chlorocebus sabaeus	35.09	5.00e-49	187.00
IUUC-Cho-024307	Choloepus hoffmanni	35.33	1.00e-50	193.00
IUUC-Cin-025619	Ciona intestinalis	34.40	1.00e-53	203.00
IUUC-Csv-026322	Ciona savignyi	32.07	1.00e-47	182.00
IUUC-Dre-027762	Danio rerio	34.50	9.00e-58	216.00
IUUC-Dno-029666	Dasypus novemcinctus	34.93	7.00e-53	200.00
IUUC-Dor-030133	Dipodomys ordii	46.21	5.00e-29	121.00
IUUC-Dme-031705	Drosophila melanogaster	29.97	8.00e-36	143.00
IUUC-Ete-032356	Echinops telfairi	42.59	2.00e-20	91.70
IUUC-Eca-033340	Equus caballus	35.07	2.00e-50	192.00
IUUC-Eeu-035167	Erinaceus europaeus	43.16	2.00e-40	159.00
IUUC-Fca-035536	Felis catus	35.07	2.00e-50	192.00
IUUC-Fal-036881	Ficedula albicollis	33.24	9.00e-49	186.00
IUUC-Gmo-039495	Gadus morhua	43.98	1.00e-46	179.00
IUUC-Ggr-039835	Gaeumannomyces graminis	54.00	5.00e-12	65.50
IUUC-Gga-041148	Gallus gallus	33.91	2.00e-49	189.00
IUUC-Gac-041790	Gasterosteus aculeatus	34.88	9.00e-58	216.00
IUUC-Ggo-045245	Gorilla gorilla	35.23	7.00e-51	193.00
IUUC-Hsa-046589	Homo sapiens	35.23	1.00e-50	193.00
IUUC-Hvu-047044	Hordeum vulgare	55.65	5.00e-93	333.00
IUUC-Itr-048468	Ictidomys tridecemlineatus	45.45	3.00e-29	121.00
IUUC-Lch-049777	Latimeria chalumnae	33.05	2.00e-51	195.00
IUUC-Loc-052281	Lepisosteus oculatus	33.33	1.00e-55	209.00
IUUC-Laf-054551	Loxodonta africana	34.46	2.00e-50	192.00
IUUC-Mcc-055160	Macaca mulatta	35.36	5.00e-49	187.00
IUUC-Meu-056809	Macropus eugenii	33.62	7.00e-51	194.00
IUUC-Mla-059005	Melampsora laricipopulina	33.00	2.00e-21	96.70
IUUC-Mga-059767	Meleagris gallopavo	43.16	2.00e-40	159.00
IUUC-Mmr-061574	Microcebus murinus	33.90	1.00e-50	193.00
IUUC-Mdo-061974	Monodelphis domestica	34.20	2.00e-53	202.00
IUUC-Mmu-063887	Mus musculus	35.33	5.00e-53	201.00
IUUC-Mac-064993	Musa acuminata	53.97	1.00e-113	401.00
IUUC-Mpu-066756	Mustela putorius furo	34.88	5.00e-48	184.00
IUUC-Mlu-067691	Myotis lucifugus	35.36	5.00e-50	191.00
IUUC-Nle-069845	Nomascus leucogenys	35.51	5.00e-51	194.00
IUUC-Opr-070262	Ochotona princeps	34.76	5.00e-52	197.00
IUUC-Ont-071561	Oreochromis niloticus	35.90	5.00e-60	224.00
IUUC-Oan-073517	Ornithorhynchus anatinus	50.91	2.00e-12	65.10
IUUC-Ocu-074869	Oryctolagus cuniculus	32.65	3.00e-36	144.00
IUUC-Ola-086506	Oryzias latipes	35.06	2.00e-58	218.00
IUUC-Olu-087870	Ostreococcus lucimarinus	44.37	4.00e-36	142.00
IUUC-Oga-088871	Otolemur garnettii	35.04	8.00e-52	197.00
IUUC-Oar-090436	Ovis aries	33.52	2.00e-49	189.00
IUUC-Ptr-091519	Pan troglodytes	35.23	1.00e-50	193.00
IUUC-Pan-092582	Papio anubis	34.65	2.00e-50	192.00
IUUC-Psi-093168	Pelodiscus sinensis	35.09	9.00e-50	190.00
IUUC-Pfo-096075	Poecilia formosa	36.06	2.00e-58	218.00
IUUC-Pab-098764	Pongo abelii	34.21	1.00e-48	186.00
IUUC-Pop-099909	Populus trichocarpa	53.70	3.00e-111	394.00
IUUC-Pca-100903	Procavia capensis	33.33	2.00e-55	209.00
IUUC-Ppe-101248	Prunus persica	63.35	8.00e-75	273.00
IUUC-Pva-103124	Pteropus vampyrus	32.00	4.00e-38	151.00
IUUC-Rno-104976	Rattus norvegicus	35.33	2.00e-51	196.00
IUUC-Sha-107572	Sarcophilus harrisii	33.63	5.00e-51	194.00
IUUC-Smo-109483	Selaginella moellendorffii	52.65	4.00e-68	250.00
IUUC-Sit-110077	Setaria italica	88.22	0.00e+00	647.00
IUUC-Sar-113068	Sorex araneus	34.78	1.00e-49	189.00
IUUC-Ssc-115272	Sus scrofa	35.80	5.00e-51	194.00
IUUC-Tgu-116537	Taeniopygia guttata	32.84	6.00e-48	184.00
IUUC-Tru-118205	Takifugu rubripes	34.54	2.00e-58	218.00
IUUC-Tsy-118929	Tarsius syrichta	43.16	6.00e-40	157.00
IUUC-Tni-120744	Tetraodon nigroviridis	33.06	1.00e-55	209.00
IUUC-Tca-121675	Theobroma cacao	52.10	3.00e-97	347.00
IUUC-Tur-126806	Triticum urartu	58.52	2.00e-94	338.00
IUUC-Tme-127048	Tuber melanosporum	26.64	1.00e-16	79.70
IUUC-Tbe-128131	Tupaia belangeri	32.88	2.00e-38	152.00
IUUC-Ttr-129099	Tursiops truncatus	34.76	3.00e-52	198.00
IUUC-Vpa-130663	Vicugna pacos	39.86	1.00e-27	115.00
IUUC-Xtr-132036	Xenopus tropicalis	44.74	2.00e-41	161.00
IUUC-Xma-134162	Xiphophorus maculatus	35.31	7.00e-59	220.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence