iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131411

UUCD1 version

UUC-ViV-01032

Ensembl Protein ID

VIT_03s0038g02570.t01

UniProt Accession

F6I0Z4; F6I0Z4_VITVI

Genbank Protein ID

CCB60610.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596508

Gene Name

UBC23; VIT_03s0038g02570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0038g02570	VIT_03s0038g02570.t01	VIT_03s0038g02570.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.10e-24	85.5	964	1098

Active Site

Position(s)	Description	Evidence
1045	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsi 85
           ++++ + l+++ p+gi +++ ++  ++ ++++i G  +tpY++g+F +++++p++YP  PP+  + +   + +Pn+ye+GkvCls+
   Q: 964  VQQDWSILQNNLPDGIYVRVYED-RMDLLRAVIAGAYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGgwRINPNLYEEGKVCLSL 1048
           6899999****************.5******************************************98899************** PP
   S: 86   lk.....eeekWsp.alsvesvllsiqsll..aepnpesplneeaaellk 127
           l+      +e W p  +s+ +vl+s+q l+  ++p+++++ ++++  + +
   Q: 1049 LNtwtgrGNEVWDPvSSSILQVLVSLQGLVlnSKPYFNEAGYDKQIGTAE 1098
           *77777789*****6678***********98888*****99988875444 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MYFFFIKKRR RYFWFWYIID SIHTEERDQS CCPKAVQETA LSLHLFPPLF ESLVFKMRIN 60
QQDGVSQVDE PSTSVHDNTT LDQGDATVNG ILSDSNAIYE SNEATKMPDV AKETLNIPCI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATTTTT TTTTTATAAA AAAAAGAAGA AGATATTTTT GGTTTTGGTA CATCATCGAT 60
TCAATACATA CTGAAGAACG AGACCAATCA TGTTGTGTCA CGTATAAATT TTAGGTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000597	Aegilops tauschii	48.15	0.00e+00	940.00
IUUC-Aml-001463	Ailuropoda melanoleuca	42.86	2.00e-53	203.00
IUUC-Atr-002469	Amborella trichopoda	55.61	0.00e+00	1087.00
IUUC-Apl-004084	Anas platyrhynchos	44.86	4.00e-52	199.00
IUUC-Aca-004435	Anolis carolinensis	44.60	1.00e-51	197.00
IUUC-Aly-005970	Arabidopsis lyrata	63.44	0.00e+00	1215.00
IUUC-Ath-007320	Arabidopsis thaliana	64.49	0.00e+00	1204.00
IUUC-Acl-008031	Aspergillus clavatus	44.00	8.00e-43	168.00
IUUC-Afu-009040	Aspergillus fumigatus	40.82	4.00e-44	172.00
IUUC-Ang-009816	Aspergillus niger	43.15	6.00e-42	165.00
IUUC-Aor-010121	Aspergillus oryzae	48.63	4.00e-38	152.00
IUUC-Ate-010487	Aspergillus terreus	42.16	1.00e-46	181.00
IUUC-Ame-010604	Astyanax mexicanus	43.24	6.00e-50	192.00
IUUC-Bta-013234	Bos taurus	28.32	1.00e-64	241.00
IUUC-Bdi-015067	Brachypodium distachyon	50.29	0.00e+00	870.00
IUUC-Bol-016468	Brassica oleracea	60.31	0.00e+00	1172.00
IUUC-Bra-016796	Brassica rapa	64.17	0.00e+00	1165.00
IUUC-Cja-018812	Callithrix jacchus	42.40	3.00e-52	200.00
IUUC-Cfa-020448	Canis familiaris	42.86	3.00e-53	203.00
IUUC-Cpo-021316	Cavia porcellus	27.72	3.00e-66	246.00
IUUC-Csa-023869	Chlorocebus sabaeus	42.40	3.00e-52	199.00
IUUC-Cin-025614	Ciona intestinalis	26.50	1.00e-13	70.10
IUUC-Dre-028814	Danio rerio	42.86	8.00e-51	194.00
IUUC-Dno-029590	Dasypus novemcinctus	48.53	2.00e-34	140.00
IUUC-Dor-030644	Dipodomys ordii	33.78	2.00e-35	144.00
IUUC-Dse-031508	Dothistroma septosporum	44.81	5.00e-43	168.00
IUUC-Dme-032211	Drosophila melanogaster	45.79	3.00e-51	197.00
IUUC-Eca-033413	Equus caballus	42.47	1.00e-51	197.00
IUUC-Eeu-035035	Erinaceus europaeus	44.67	1.00e-48	187.00
IUUC-Fca-035610	Felis catus	42.86	1.00e-52	201.00
IUUC-Fal-036879	Ficedula albicollis	45.07	2.00e-53	203.00
IUUC-Gmo-039262	Gadus morhua	43.66	3.00e-51	196.00
IUUC-Gga-040958	Gallus gallus	45.07	3.00e-53	203.00
IUUC-Gac-041730	Gasterosteus aculeatus	44.13	3.00e-51	196.00
IUUC-Gma-042690	Glycine max	67.21	0.00e+00	1355.00
IUUC-Ggo-045316	Gorilla gorilla	42.40	4.00e-52	199.00
IUUC-Hsa-046126	Homo sapiens	42.40	4.00e-52	199.00
IUUC-Hvu-047713	Hordeum vulgare	47.81	0.00e+00	909.00
IUUC-Itr-048048	Ictidomys tridecemlineatus	42.47	2.00e-51	197.00
IUUC-Lch-050531	Latimeria chalumnae	44.86	1.00e-52	201.00
IUUC-Lpe-051587	Leersia perrieri	46.78	0.00e+00	876.00
IUUC-Loc-052209	Lepisosteus oculatus	43.19	9.00e-50	191.00
IUUC-Mcc-055722	Macaca mulatta	42.40	4.00e-52	199.00
IUUC-Meu-056834	Macropus eugenii	42.79	6.00e-52	198.00
IUUC-Mtr-057804	Medicago truncatula	65.84	0.00e+00	1242.00
IUUC-Mga-059571	Meleagris gallopavo	44.60	2.00e-52	200.00
IUUC-Mvi-060389	Microbotryum violaceum	42.58	2.00e-48	186.00
IUUC-Mmr-061535	Microcebus murinus	42.86	2.00e-52	201.00
IUUC-Mdo-062111	Monodelphis domestica	43.32	1.00e-53	204.00
IUUC-Mmu-064171	Mus musculus	42.86	1.00e-52	201.00
IUUC-Mac-065339	Musa acuminata	55.11	0.00e+00	676.00
IUUC-Mpu-065697	Mustela putorius furo	42.86	4.00e-53	202.00
IUUC-Mlu-068177	Myotis lucifugus	42.01	1.00e-50	194.00
IUUC-Nfi-068366	Neosartorya fischeri	37.70	1.00e-44	174.00
IUUC-Nle-069704	Nomascus leucogenys	42.40	3.00e-52	200.00
IUUC-Opr-070982	Ochotona princeps	43.32	3.00e-53	203.00
IUUC-Ont-072115	Oreochromis niloticus	42.72	9.00e-50	191.00
IUUC-Oan-072991	Ornithorhynchus anatinus	47.46	3.00e-29	123.00
IUUC-Ocu-073994	Oryctolagus cuniculus	43.32	8.00e-53	201.00
IUUC-Oba-075236	Oryza barthii	51.18	0.00e+00	922.00
IUUC-Obr-076363	Oryza brachyantha	50.83	0.00e+00	922.00
IUUC-Ogl-077340	Oryza glaberrima	50.39	0.00e+00	899.00
IUUC-Ogu-078084	Oryza glumaepatula	49.90	0.00e+00	879.00
IUUC-Ome-081767	Oryza meridionalis	51.08	0.00e+00	923.00
IUUC-Oni-082897	Oryza nivara	51.18	0.00e+00	922.00
IUUC-Opu-083143	Oryza punctata	51.47	0.00e+00	930.00
IUUC-Oru-084813	Oryza rufipogon	51.18	0.00e+00	921.00
IUUC-Osa-085536	Oryza sativa	50.39	0.00e+00	898.00
IUUC-Ola-087200	Oryzias latipes	44.66	2.00e-48	187.00
IUUC-Oga-088737	Otolemur garnettii	42.86	1.00e-52	201.00
IUUC-Oar-090259	Ovis aries	34.28	3.00e-46	179.00
IUUC-Ptr-091146	Pan troglodytes	45.88	4.00e-49	189.00
IUUC-Pan-091743	Papio anubis	42.40	4.00e-52	199.00
IUUC-Psi-093231	Pelodiscus sinensis	48.65	1.00e-48	187.00
IUUC-Pma-094499	Petromyzon marinus	45.37	2.00e-51	197.00
IUUC-Pno-095065	Phaeosphaeria nodorum	50.00	8.00e-34	138.00
IUUC-Ppa-095324	Physcomitrella patens	64.73	7.00e-101	361.00
IUUC-Pfo-096799	Poecilia formosa	43.66	3.00e-50	193.00
IUUC-Pab-098220	Pongo abelii	42.40	4.00e-52	199.00
IUUC-Pop-099156	Populus trichocarpa	69.04	0.00e+00	1199.00
IUUC-Pca-100963	Procavia capensis	43.32	4.00e-53	202.00
IUUC-Ppe-101372	Prunus persica	70.40	0.00e+00	1437.00
IUUC-Pva-102384	Pteropus vampyrus	40.68	2.00e-51	197.00
IUUC-Pte-104381	Pyrenophora teres	44.09	2.00e-41	163.00
IUUC-Pyt-104607	Pyrenophora triticirepentis	44.57	5.00e-41	162.00
IUUC-Rno-105947	Rattus norvegicus	27.75	2.00e-64	240.00
IUUC-Sha-106642	Sarcophilus harrisii	43.32	7.00e-54	205.00
IUUC-Smo-109361	Selaginella moellendorffii	58.51	6.00e-103	367.00
IUUC-Sit-110041	Setaria italica	51.90	0.00e+00	666.00
IUUC-Sly-111922	Solanum lycopersicum	68.49	0.00e+00	1269.00
IUUC-Stu-112339	Solanum tuberosum	68.62	0.00e+00	1317.00
IUUC-Sar-113102	Sorex araneus	38.02	1.00e-18	85.90
IUUC-Sbi-114493	Sorghum bicolor	52.51	0.00e+00	664.00
IUUC-Sre-114954	Sporisorium reilianum	44.27	9.00e-46	177.00
IUUC-Ssc-115901	Sus scrofa	41.53	4.00e-53	202.00
IUUC-Tgu-116873	Taeniopygia guttata	44.65	6.00e-52	198.00
IUUC-Tsy-119256	Tarsius syrichta	46.63	4.00e-44	172.00
IUUC-Tni-120839	Tetraodon nigroviridis	43.40	3.00e-50	193.00
IUUC-Tca-121665	Theobroma cacao	69.68	0.00e+00	1419.00
IUUC-Tae-124031	Triticum aestivum	47.79	0.00e+00	928.00
IUUC-Tbe-127630	Tupaia belangeri	48.31	1.00e-09	60.50
IUUC-Ttr-128990	Tursiops truncatus	28.13	3.00e-64	239.00
IUUC-Uma-129323	Ustilago maydis	42.86	1.00e-46	180.00
IUUC-Xma-133380	Xiphophorus maculatus	44.13	2.00e-50	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence