iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003290

Ensembl Protein ID

ENSAPLP00000004929.1

UniProt Accession

U3ICF7; U3ICF7_ANAPL

Genbank Protein ID

ENSAPLP00000004929

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01006288

Gene Name

RC3H1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000005341.1	ENSAPLT00000005553.1	ENSAPLP00000004929.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	44.68	3.00e-04	45.10	IUUC-Ath-007510
E3 activity/RING/RING	86.82	0.00e+00	1842.00	IUUC-Hsa-046163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MPVQAPQWTD FLSCPICTQT FDETIRKPIS LGCGHTVCKM CLNKLHRKAC PFDQTTINTD 60
IELLPVNSAL LQLVGAQVPE QQPITLCSGA EDTKHYEEGK KCVEELALYL KPLSSARGVG 120

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Nucleotide Sequence
(Fasta)

ATGCCTGTAC AAGCTCCACA ATGGACAGAT TTTCTCTCCT GCCCAATTTG CACACAGACT 60
TTCGACGAAA CGATCCGAAA GCCCATCAGC TTGGGTTGCG GCCACACTGT CTGCAAGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032671--RC3H1
IPR027370--Znf-RING_LisH
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0000932--C:P-body
GO:0003730--F:mRNA 3'-UTR binding
GO:0035613--F:RNA stem-loop binding
GO:0008270--F:zinc ion binding
GO:0061158--P:3'-UTR-mediated mRNA destabilization
GO:0001782--P:B cell homeostasis
GO:0071347--P:cellular response to interleukin-1
GO:0033962--P:cytoplasmic mRNA processing body assembly
GO:0048535--P:lymph node development
GO:0046007--P:negative regulation of activated T cell proliferation
GO:0030889--P:negative regulation of B cell proliferation
GO:0002635--P:negative regulation of germinal center formation
GO:0045623--P:negative regulation of T-helper cell differentiation
GO:0000288--P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0061014--P:positive regulation of mRNA catabolic process
GO:1901224--P:positive regulation of NIK/NF-kappaB signaling
GO:0050856--P:regulation of T cell receptor signaling pathway
GO:0048536--P:spleen development
GO:0043029--P:T cell homeostasis
GO:0042098--P:T cell proliferation
GO:0061470--P:T follicular helper cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000568	Aegilops tauschii	48.39	8.00e-05	40.40
IUUC-Aml-001700	Ailuropoda melanoleuca	87.69	0.00e+00	1784.00
IUUC-Aca-004905	Anolis carolinensis	85.91	0.00e+00	1809.00
IUUC-Ath-007510	Arabidopsis thaliana	44.68	3.00e-06	45.10
IUUC-Ame-011475	Astyanax mexicanus	63.69	0.00e+00	1179.00
IUUC-Cja-019907	Callithrix jacchus	87.79	0.00e+00	1838.00
IUUC-Cfa-020679	Canis familiaris	87.42	0.00e+00	1765.00
IUUC-Cpo-022110	Cavia porcellus	85.00	0.00e+00	1779.00
IUUC-Csa-024166	Chlorocebus sabaeus	88.50	0.00e+00	1765.00
IUUC-Dno-029870	Dasypus novemcinctus	81.29	0.00e+00	837.00
IUUC-Dme-031708	Drosophila melanogaster	64.73	2.00e-162	565.00
IUUC-Ete-032652	Echinops telfairi	87.02	0.00e+00	1266.00
IUUC-Eca-033236	Equus caballus	86.46	0.00e+00	1727.00
IUUC-Eeu-035091	Erinaceus europaeus	80.81	0.00e+00	853.00
IUUC-Fca-035773	Felis catus	87.96	0.00e+00	1776.00
IUUC-Fal-036972	Ficedula albicollis	94.42	0.00e+00	2048.00
IUUC-Gmo-039303	Gadus morhua	79.69	0.00e+00	892.00
IUUC-Ggo-044691	Gorilla gorilla	82.63	0.00e+00	1689.00
IUUC-Hsa-046163	Homo sapiens	87.97	0.00e+00	1833.00
IUUC-Itr-048266	Ictidomys tridecemlineatus	78.78	0.00e+00	879.00
IUUC-Lch-050667	Latimeria chalumnae	73.52	0.00e+00	1484.00
IUUC-Loc-052404	Lepisosteus oculatus	69.50	0.00e+00	1314.00
IUUC-Laf-053618	Loxodonta africana	88.28	0.00e+00	1733.00
IUUC-Mcc-054692	Macaca mulatta	88.23	0.00e+00	1841.00
IUUC-Meu-056025	Macropus eugenii	78.25	0.00e+00	847.00
IUUC-Mmr-061188	Microcebus murinus	87.51	0.00e+00	1773.00
IUUC-Mdo-063035	Monodelphis domestica	86.05	0.00e+00	1790.00
IUUC-Mmu-064146	Mus musculus	85.33	0.00e+00	1762.00
IUUC-Mpu-066217	Mustela putorius furo	87.59	0.00e+00	1767.00
IUUC-Mlu-068023	Myotis lucifugus	86.19	0.00e+00	1769.00
IUUC-Nle-069506	Nomascus leucogenys	88.06	0.00e+00	1838.00
IUUC-Opr-070587	Ochotona princeps	74.63	0.00e+00	1437.00
IUUC-Ont-071278	Oreochromis niloticus	77.04	0.00e+00	886.00
IUUC-Oan-073500	Ornithorhynchus anatinus	87.95	0.00e+00	1880.00
IUUC-Ocu-074299	Oryctolagus cuniculus	86.63	0.00e+00	1681.00
IUUC-Ola-086665	Oryzias latipes	60.30	0.00e+00	1182.00
IUUC-Oga-088519	Otolemur garnettii	80.56	0.00e+00	1568.00
IUUC-Oar-089246	Ovis aries	86.60	0.00e+00	1672.00
IUUC-Ptr-091102	Pan troglodytes	88.06	0.00e+00	1835.00
IUUC-Pan-091952	Papio anubis	88.32	0.00e+00	1846.00
IUUC-Pfo-097227	Poecilia formosa	60.15	0.00e+00	1138.00
IUUC-Pab-097975	Pongo abelii	85.53	0.00e+00	1763.00
IUUC-Pca-101127	Procavia capensis	79.48	0.00e+00	1137.00
IUUC-Pva-102431	Pteropus vampyrus	79.39	0.00e+00	1561.00
IUUC-Pgr-103377	Puccinia graminis	38.30	2.00e-04	40.40
IUUC-Sha-106690	Sarcophilus harrisii	85.54	0.00e+00	1805.00
IUUC-Sit-110791	Setaria italica	41.30	1.00e-05	43.10
IUUC-Sbi-114208	Sorghum bicolor	41.30	1.00e-05	43.10
IUUC-Ssc-116189	Sus scrofa	86.90	0.00e+00	1715.00
IUUC-Tgu-116527	Taeniopygia guttata	94.05	0.00e+00	2035.00
IUUC-Tru-118389	Takifugu rubripes	61.78	0.00e+00	1200.00
IUUC-Tsy-119193	Tarsius syrichta	84.98	0.00e+00	1712.00
IUUC-Tni-119790	Tetraodon nigroviridis	63.02	0.00e+00	1097.00
IUUC-Tbe-127445	Tupaia belangeri	84.36	0.00e+00	1414.00
IUUC-Ttr-128877	Tursiops truncatus	85.89	0.00e+00	1716.00
IUUC-Xtr-132274	Xenopus tropicalis	78.10	0.00e+00	1596.00
IUUC-Xma-134230	Xiphophorus maculatus	60.13	0.00e+00	1144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence