iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107904

Ensembl Protein ID

EEB06660

UniProt Accession

B6JYP2; B6JYP2_SCHJY

Genbank Protein ID

EEB06660.2

Protein Name

Transcription elongation regulator

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01707

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01707	EEB06660	EEB06660

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-10	39.6	50	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            C +Cg+++++ + +v+C+ C++w+H+ C++l+ ++ lp++  ++C+ Cr
   Q: 50   RC-ICGSATDNGETFVQCDGCDNWQHASCMGLK-SDALPEK--YYCELCR 95
           69.********9*********************.*******..******8 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDDIDFSIND FPINNNVDVL FSHSEFNDQL GQNIPKRENN PSSYSGDVTR CICGSATDNG 60
ETFVQCDGCD NWQHASCMGL KSDALPEKYY CELCRPDLHP ELVYRQKQYQ QVDILPQETT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCGTTGT GCTAGATCTT TAGCTTCAGT TTGTTTAGAT GTAACTTCTG CTATATCTTT 60
CTCAAAGTTC GACCACTCTT CGTCTATCGC GGTATTGTTA CCGGTACTGG TTTTGTCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012921--SPOC_C
IPR003618--TFIIS_cen_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51321--TFIIS_CENTRAL
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF07744--SPOC
PF07500--TFIIS_M

SMART

SM00249--PHD
SM00510--TFS2M

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001202	Ailuropoda melanoleuca	31.85	2.00e-14	74.30
IUUC-Aca-004562	Anolis carolinensis	33.74	8.00e-16	78.60
IUUC-Bta-013233	Bos taurus	33.33	6.00e-16	79.00
IUUC-Bra-018042	Brassica rapa	34.88	6.00e-08	48.50
IUUC-Cfa-021034	Canis familiaris	31.07	2.00e-15	77.00
IUUC-Cpo-021803	Cavia porcellus	32.16	5.00e-16	79.30
IUUC-Cre-022852	Chlamydomonas reinhardtii	27.78	2.00e-04	40.00
IUUC-Csa-023686	Chlorocebus sabaeus	31.07	3.00e-15	76.60
IUUC-Cne-027077	Cryptococcus neoformans	43.86	2.00e-12	66.60
IUUC-Dno-029513	Dasypus novemcinctus	33.08	2.00e-14	73.60
IUUC-Dor-030833	Dipodomys ordii	32.70	4.00e-15	76.30
IUUC-Gac-041527	Gasterosteus aculeatus	33.33	4.00e-12	66.20
IUUC-Ggo-044747	Gorilla gorilla	31.07	5.00e-15	75.90
IUUC-Hsa-046225	Homo sapiens	31.07	6.00e-15	75.90
IUUC-Itr-048422	Ictidomys tridecemlineatus	32.16	1.00e-15	78.20
IUUC-Kpa-049206	Komagataella pastoris	25.11	2.00e-20	91.70
IUUC-Lch-050039	Latimeria chalumnae	33.94	5.00e-13	69.30
IUUC-Laf-053940	Loxodonta africana	32.48	6.00e-15	75.90
IUUC-Mcc-055809	Macaca mulatta	31.07	4.00e-15	76.30
IUUC-Mmr-061055	Microcebus murinus	31.58	1.00e-14	74.70
IUUC-Mdo-062683	Monodelphis domestica	32.16	4.00e-15	76.30
IUUC-Mmu-064010	Mus musculus	33.76	5.00e-16	79.30
IUUC-Mpu-066844	Mustela putorius furo	31.90	9.00e-15	75.10
IUUC-Mlu-067160	Myotis lucifugus	31.76	6.00e-15	75.50
IUUC-Nle-070068	Nomascus leucogenys	31.07	6.00e-15	75.90
IUUC-Ont-072366	Oreochromis niloticus	32.93	2.00e-16	80.90
IUUC-Oan-072746	Ornithorhynchus anatinus	33.76	1.00e-15	78.20
IUUC-Ocu-074336	Oryctolagus cuniculus	33.76	1.00e-15	78.20
IUUC-Oni-082512	Oryza nivara	29.55	2.00e-06	45.40
IUUC-Ola-086406	Oryzias latipes	32.95	9.00e-16	78.60
IUUC-Olu-087787	Ostreococcus lucimarinus	38.30	3.00e-08	52.00
IUUC-Oga-088506	Otolemur garnettii	31.64	4.00e-15	76.30
IUUC-Ptr-091448	Pan troglodytes	31.07	5.00e-15	75.90
IUUC-Pan-092481	Papio anubis	31.07	4.00e-15	76.30
IUUC-Pab-098673	Pongo abelii	31.07	6.00e-15	75.90
IUUC-Pte-104182	Pyrenophora teres	44.44	2.00e-09	55.50
IUUC-Rno-105243	Rattus norvegicus	32.52	2.00e-15	77.40
IUUC-Sha-107260	Sarcophilus harrisii	32.16	3.00e-15	77.00
IUUC-Stu-112041	Solanum tuberosum	44.00	4.00e-05	41.60
IUUC-Tru-117650	Takifugu rubripes	33.97	4.00e-16	79.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence