iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106575

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01178809

Gene Name

TRIM50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015185.1	ENSSHAT00000018035.1	ENSSHAP00000017887.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.60e-06	25.9	13	78
E3 activity/RING/RING	4.60e-08	33.6	16	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedl.vPnltlrrliqa 67
            ++Cp+ le++++P +l++G++y r ++     + g+   cPv+r+   + +   Pn +l ++i+a
   Q: 13   RLRCPVCLEVFKEPLMLQCGHSYCRDCLNALAHHLGSqlFCPVCRRVEPDVSNsPPNVSLAQVIEA 78
           689************************9885544444579*****999777775899999999987 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle fk+ pl l+CgH +++dCl+++   +++ s+ f CP+Cr
   Q: 16   CPVCLEVFKE-PLMLQCGHSYCRDCLNAL--AHHLGSQLF-CPVCR 57
           ********99.999************999..333355555.****8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MALLTRDPDL ANRLRCPVCL EVFKEPLMLQ CGHSYCRDCL NALAHHLGSQ LFCPVCRRVE 60
PDVSNSPPNV SLAQVIEALH LPGEQELSLC PHHRNPLSLF CERDGELICG LCGLLGSHQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCGCCCCT CCTCCTGGGC CCTCCCAGCC CCTCCTCCTT CCCCCCCTCA CCTGAACTGC 60
CGCTATCAGA GCGGGGCCAG CCTGCGGCAG CCCCTGGGTC CTGTGACCGA GATGGGTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0016235--C:aggresome
GO:0008270--F:zinc ion binding
GO:0070201--P:regulation of establishment of protein localization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	65.70	2.00e-175	608.00
IUUC-Apl-004051	Anas platyrhynchos	51.94	2.00e-129	455.00
IUUC-Ame-010964	Astyanax mexicanus	48.11	3.00e-118	418.00
IUUC-Bta-012642	Bos taurus	67.09	3.00e-175	607.00
IUUC-Cja-019011	Callithrix jacchus	60.51	9.00e-147	513.00
IUUC-Cfa-020270	Canis familiaris	64.67	2.00e-172	598.00
IUUC-Cpo-022458	Cavia porcellus	63.85	2.00e-164	572.00
IUUC-Csa-023478	Chlorocebus sabaeus	63.92	2.00e-166	578.00
IUUC-Dno-028894	Dasypus novemcinctus	64.89	7.00e-167	580.00
IUUC-Dor-030228	Dipodomys ordii	61.57	5.00e-139	487.00
IUUC-Eca-033497	Equus caballus	66.53	2.00e-177	615.00
IUUC-Eeu-034910	Erinaceus europaeus	58.39	5.00e-90	323.00
IUUC-Fca-036164	Felis catus	65.91	5.00e-177	613.00
IUUC-Gga-040573	Gallus gallus	53.85	8.00e-85	307.00
IUUC-Ggo-044471	Gorilla gorilla	65.67	5.00e-166	577.00
IUUC-Hsa-046039	Homo sapiens	64.56	8.00e-166	576.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	65.58	1.00e-162	565.00
IUUC-Lch-050638	Latimeria chalumnae	48.38	2.00e-122	432.00
IUUC-Loc-051971	Lepisosteus oculatus	48.55	3.00e-119	421.00
IUUC-Laf-054291	Loxodonta africana	64.06	2.00e-163	568.00
IUUC-Mcc-055708	Macaca mulatta	63.50	4.00e-165	574.00
IUUC-Meu-056670	Macropus eugenii	83.96	4.00e-136	478.00
IUUC-Mga-059415	Meleagris gallopavo	52.16	3.00e-132	464.00
IUUC-Mmr-061410	Microcebus murinus	64.26	4.00e-158	550.00
IUUC-Mmu-064094	Mus musculus	64.05	4.00e-172	597.00
IUUC-Mpu-065781	Mustela putorius furo	64.96	1.00e-174	605.00
IUUC-Mlu-067974	Myotis lucifugus	65.05	5.00e-166	577.00
IUUC-Nle-069000	Nomascus leucogenys	65.19	2.00e-168	584.00
IUUC-Opr-071216	Ochotona princeps	61.68	1.00e-62	233.00
IUUC-Ocu-074859	Oryctolagus cuniculus	65.67	4.00e-166	577.00
IUUC-Oga-088285	Otolemur garnettii	64.45	6.00e-170	590.00
IUUC-Oar-090161	Ovis aries	62.98	5.00e-163	566.00
IUUC-Ptr-091672	Pan troglodytes	64.98	1.00e-166	579.00
IUUC-Pan-092870	Papio anubis	63.92	5.00e-166	577.00
IUUC-Psi-093742	Pelodiscus sinensis	55.56	4.00e-145	507.00
IUUC-Pab-098034	Pongo abelii	64.98	7.00e-167	580.00
IUUC-Pca-100115	Procavia capensis	59.75	1.00e-45	176.00
IUUC-Pva-103234	Pteropus vampyrus	65.82	1.00e-170	592.00
IUUC-Rno-105163	Rattus norvegicus	64.67	3.00e-167	581.00
IUUC-Ssc-115600	Sus scrofa	67.56	2.00e-178	618.00
IUUC-Tbe-128151	Tupaia belangeri	70.11	1.00e-72	265.00
IUUC-Ttr-128947	Tursiops truncatus	66.38	1.00e-167	582.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence