iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104473

Ensembl Protein ID

EDU42786

UniProt Accession

B2WIC6; B2WIC6_PYRTR

Genbank Protein ID

EDU42786.1

Protein Name

Tyrosyl-DNA phosphodiesterase domain containing protein

Genbank Nucleotide ID

DS231626

Gene Name

PTRG_09735

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_09735	EDU42786	EDU42786

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	3.40e-09	35.0	41	57
UBD/Alpha-Helix/UIM	6.9e-06	14.6	3	19

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 2    EdeeLqlAlalSlqEee 18
           +de+L++A+alS+qE e
   Q: 41   DDEDLRRAIALSMQEDE 57
           8**************98 PP

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEe 17
           ++de L lA+a+Sl E 
   Q: 3    SDDENLKLAMAMSLRED 19
           79************996 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MSSDDENLKL AMAMSLREDT AGTTENSPAS GVVDLTSDSG DDEDLRRAIA LSMQEDEKPN 60
VAQQPASGTS TPATVSMLGF MGMDRKAMEQ ERLARLGKRK RDASPERPSK QIARSPPAIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCTG ATGATGAGAA TCTCAAGCTG GCGATGGCAA TGTCGCTTCG AGAGGATACA 60
GCCGGTACCA CGGAGAACTC TCCAGCATCT GGCGTCGTCG ACCTCACTTC TGACTCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001736--PLipase_D/transphosphatidylase
IPR010347--Tdp1
IPR027415--TDP_C
IPR003903--UIM_dom

PROSITE

PS50035--PLD
PS50330--UIM

Pfam

PF06087--Tyr-DNA_phospho
PF02809--UIM

SMART

SM00726--UIM

Gene Ontology

GO:0005634--C:nucleus
GO:0008081--F:phosphoric diester hydrolase activity
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005171	Anolis carolinensis	33.33	2.30e-01	27.70
IUUC-Ani-009305	Aspergillus nidulans	33.33	8.00e-23	100.00
IUUC-Aor-009979	Aspergillus oryzae	28.57	5.00e-59	220.00
IUUC-Ate-010480	Aspergillus terreus	35.75	7.00e-52	196.00
IUUC-Bci-013745	Botrytis cinerea	35.05	4.00e-102	363.00
IUUC-Bol-015700	Brassica oleracea	34.00	8.70e-01	27.30
IUUC-Csa-023257	Chlorocebus sabaeus	47.06	6.00e-03	33.10
IUUC-Cne-027074	Cryptococcus neoformans	40.00	3.10e+00	25.80
IUUC-Eca-034338	Equus caballus	43.59	1.80e-01	28.50
IUUC-Itr-048851	Ictidomys tridecemlineatus	45.00	4.50e-02	30.00
IUUC-Lch-049519	Latimeria chalumnae	36.47	5.00e-03	33.10
IUUC-Lpe-050758	Leersia perrieri	32.43	5.00e-03	34.30
IUUC-Mcc-054793	Macaca mulatta	46.88	2.00e-02	31.20
IUUC-Meu-056589	Macropus eugenii	34.18	8.00e-03	33.10
IUUC-Mac-065516	Musa acuminata	31.11	1.40e-02	30.40
IUUC-Oba-075707	Oryza barthii	29.31	6.70e-02	30.40
IUUC-Ogu-078055	Oryza glumaepatula	26.32	2.40e-01	28.50
IUUC-Olo-081092	Oryza longistaminata	27.88	6.50e-02	31.20
IUUC-Oni-082309	Oryza nivara	29.47	2.90e-01	28.50
IUUC-Opu-083196	Oryza punctata	30.53	8.50e-02	30.00
IUUC-Oru-085213	Oryza rufipogon	29.47	2.90e-01	28.50
IUUC-Ola-087566	Oryzias latipes	43.24	5.10e-02	30.00
IUUC-Pan-092742	Papio anubis	47.06	5.00e-03	33.50
IUUC-Pno-095003	Phaeosphaeria nodorum	54.35	0.00e+00	659.00
IUUC-Pab-098435	Pongo abelii	47.06	2.00e-02	31.60
IUUC-Pte-104155	Pyrenophora teres	87.41	0.00e+00	1035.00
IUUC-Sha-107106	Sarcophilus harrisii	30.77	8.00e-04	36.20
IUUC-Ssc-115552	Sus scrofa	66.67	3.20e-01	27.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence