iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106856

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01103612

Gene Name

GNB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000012349.1	ENSSHAT00000014587.1	ENSSHAP00000014466.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-42	142.1	224	259
UBD/Beta-Prp	1.70e-54	185.2	136	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++++++++f ++ + +++GsdD t++++Dlr + 
   Q: 224  GHESDINAICFfPNgNAFATGSDDATCRLFDLRADQ 259
           8*********99777*****************9875 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
            r+l gh++  ++++f +d   +vt+s D t  +wd++tg+++ t++gh+ +v+sls+ p++  +vsG  d  +++wd+++g c + t+
   Q: 136  SRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ-TF 222
           7899***************7.7****************************************************************.** PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlngh 221
           +gh++ +n +++ p+gn +++Gs+D t+rl+dl+ ++ l      +    ++s+sf+++g+ l++g +d   ++wd  + +    l gh
   Q: 223  TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYsHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
           *********************************988888777334466799************************************** PP
   S: 222  tdnvksvrfspnderlvsgssDgsiriWd 250
           ++ v+++ +++++  +++gs D  ++iW+
   Q: 312  DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
           ****************************8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MSELDQLRQE AEQLKNQIRD ARKACADATL SQITANIDPV GRIQMRTRRT LRGHLAKIYA 60
MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIPLRSSWV MTCAYAPSGN YVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAGTTTAC ATGTATTGCA GACCAGACCA GAAATACTTC TGATTTCAGG TAATTTTATT 60
ATAATTATTC ACTAATAAGT ATTTTTAAAG TAAAATATTT TTCTTGTTAC AATATTGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005834--C:heterotrimeric G-protein complex
GO:0005765--C:lysosomal membrane
GO:0043209--C:myelin sheath
GO:0001750--C:photoreceptor outer segment
GO:0003924--F:GTPase activity
GO:0008283--P:cell proliferation
GO:0007200--P:phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0060041--P:retina development in camera-type eye
GO:0050909--P:sensory perception of taste

KEGG

shr:100930507

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001337	Ailuropoda melanoleuca	99.41	0.00e+00	665.00
IUUC-Apl-003811	Anas platyrhynchos	98.53	0.00e+00	660.00
IUUC-Acl-008154	Aspergillus clavatus	68.55	2.00e-138	484.00
IUUC-Afl-008568	Aspergillus flavus	68.82	3.00e-140	491.00
IUUC-Afu-008789	Aspergillus fumigatus	68.55	2.00e-138	484.00
IUUC-Ani-009213	Aspergillus nidulans	68.82	8.00e-139	486.00
IUUC-Ang-009836	Aspergillus niger	68.53	2.00e-139	488.00
IUUC-Aor-010165	Aspergillus oryzae	68.82	3.00e-140	491.00
IUUC-Ate-010520	Aspergillus terreus	62.38	5.00e-109	387.00
IUUC-Ame-011092	Astyanax mexicanus	98.82	0.00e+00	697.00
IUUC-Bta-012709	Bos taurus	99.41	0.00e+00	665.00
IUUC-Cja-019782	Callithrix jacchus	99.41	0.00e+00	665.00
IUUC-Cfa-020111	Canis familiaris	99.41	0.00e+00	665.00
IUUC-Cpo-022494	Cavia porcellus	99.41	0.00e+00	665.00
IUUC-Csa-023672	Chlorocebus sabaeus	99.41	0.00e+00	665.00
IUUC-Cne-026811	Cryptococcus neoformans	67.57	6.00e-138	483.00
IUUC-Dre-028478	Danio rerio	99.41	0.00e+00	700.00
IUUC-Eca-033359	Equus caballus	99.12	0.00e+00	664.00
IUUC-Fal-037004	Ficedula albicollis	98.53	0.00e+00	661.00
IUUC-Gmo-039709	Gadus morhua	98.82	0.00e+00	697.00
IUUC-Gga-041163	Gallus gallus	98.16	0.00e+00	632.00
IUUC-Gac-041386	Gasterosteus aculeatus	98.24	0.00e+00	695.00
IUUC-Gma-043322	Glycine max	45.50	3.00e-87	315.00
IUUC-Ggo-045261	Gorilla gorilla	99.07	0.00e+00	626.00
IUUC-Hsa-046450	Homo sapiens	99.41	0.00e+00	665.00
IUUC-Itr-049064	Ictidomys tridecemlineatus	99.41	0.00e+00	665.00
IUUC-Kpa-049192	Komagataella pastoris	39.17	5.00e-62	231.00
IUUC-Lch-049422	Latimeria chalumnae	98.24	0.00e+00	661.00
IUUC-Loc-052939	Lepisosteus oculatus	98.53	0.00e+00	696.00
IUUC-Laf-054222	Loxodonta africana	99.41	0.00e+00	665.00
IUUC-Mcc-054970	Macaca mulatta	99.41	0.00e+00	665.00
IUUC-Mtr-058752	Medicago truncatula	45.14	6.00e-86	310.00
IUUC-Mla-059086	Melampsora laricipopulina	72.29	2.00e-149	521.00
IUUC-Mvi-060482	Microbotryum violaceum	72.29	6.00e-149	520.00
IUUC-Mmr-061302	Microcebus murinus	99.12	0.00e+00	664.00
IUUC-Mdo-062044	Monodelphis domestica	100.00	0.00e+00	669.00
IUUC-Mmu-063323	Mus musculus	99.41	0.00e+00	665.00
IUUC-Mlu-067309	Myotis lucifugus	99.41	0.00e+00	665.00
IUUC-Nfi-068332	Neosartorya fischeri	68.55	5.00e-138	483.00
IUUC-Nle-069791	Nomascus leucogenys	99.41	0.00e+00	665.00
IUUC-Ont-071775	Oreochromis niloticus	98.53	0.00e+00	697.00
IUUC-Oan-072780	Ornithorhynchus anatinus	99.41	0.00e+00	668.00
IUUC-Ocu-073769	Oryctolagus cuniculus	99.41	0.00e+00	665.00
IUUC-Ola-087490	Oryzias latipes	97.55	0.00e+00	642.00
IUUC-Oga-087961	Otolemur garnettii	99.41	0.00e+00	665.00
IUUC-Pan-092079	Papio anubis	99.41	0.00e+00	665.00
IUUC-Psi-093225	Pelodiscus sinensis	98.53	0.00e+00	661.00
IUUC-Pfo-097028	Poecilia formosa	97.94	0.00e+00	672.00
IUUC-Pab-098658	Pongo abelii	99.41	0.00e+00	665.00
IUUC-Pca-100313	Procavia capensis	98.82	0.00e+00	655.00
IUUC-Pva-102636	Pteropus vampyrus	99.12	0.00e+00	664.00
IUUC-Pgr-103321	Puccinia graminis	73.49	1.00e-150	525.00
IUUC-Ptt-103728	Puccinia triticina	73.49	1.00e-150	525.00
IUUC-Pyt-104426	Pyrenophora triticirepentis	62.83	2.00e-123	435.00
IUUC-Rno-105112	Rattus norvegicus	99.41	0.00e+00	665.00
IUUC-Sly-111784	Solanum lycopersicum	50.32	3.00e-82	298.00
IUUC-Stu-112400	Solanum tuberosum	50.32	2.00e-82	298.00
IUUC-Sre-115035	Sporisorium reilianum	69.37	4.00e-139	487.00
IUUC-Tgu-116775	Taeniopygia guttata	98.46	0.00e+00	631.00
IUUC-Tru-117828	Takifugu rubripes	98.53	0.00e+00	697.00
IUUC-Tni-120495	Tetraodon nigroviridis	97.35	0.00e+00	664.00
IUUC-Tme-126886	Tuber melanosporum	70.06	7.00e-136	476.00
IUUC-Uma-129589	Ustilago maydis	69.67	1.00e-139	489.00
IUUC-Vvi-131162	Vitis vinifera	50.97	2.00e-85	309.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence