iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135600

Ensembl Protein ID

Zm00001d008293_T003

UniProt Accession

K7USZ5; K7USZ5_MAIZE

Genbank Protein ID

AQK89403.1; AQK89404.1; AQK89405.1; AQK89406.1; AQK89407.1; AQK89408.1

Protein Name

Putative splicing factor 3A subunit 1

Genbank Nucleotide ID

CM000784; CM000784; CM000784; CM000784; CM000784; CM000784

Gene Name

ZEAMMB73_Zm00001d008293

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d008293	Zm00001d008293_T007	Zm00001d008293_T007
Zm00001d008293	Zm00001d008293_T003	Zm00001d008293_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.20e-12	48.1	745	803

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 18   npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           + sdtV+ LKe+i ++l +p+++q+L ++   L+d+ tLa+y++ +g +i l+++++gg
   Q: 745  SLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNVGPGVVINLTLRERGG 803
           7799**************************************************99875 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAAAMGNPIL TLPAPEGNGT GGGDADQQLQ QAPPKPPPPG AKTDPPATVA THTRTIGIIH 60
PPPDIRVIIE KTATFVAKNG PEFERRIISL NQGNAKFNFL QPSDPYHAYY QHRVSEIAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGG GGAACAGCTG AAATTTCTCC AAAAATACCA ATCCGCCTTC CATGTTCTCG 60
TCGCTGCCTC CGTCTGACGG CTCGAAGCTC CCTCCAGTTC CGATCTAAAC CCGCCGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0003723--F:RNA binding
GO:0006396--P:RNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002416	Ailuropoda melanoleuca	45.18	3.00e-33	136.00
IUUC-Afu-008786	Aspergillus fumigatus	34.39	9.00e-34	137.00
IUUC-Ate-010515	Aspergillus terreus	44.92	2.00e-30	126.00
IUUC-Ame-011842	Astyanax mexicanus	41.61	7.00e-53	201.00
IUUC-Bgr-012204	Blumeria graminis	33.33	6.00e-39	154.00
IUUC-Bta-013525	Bos taurus	45.18	3.00e-33	136.00
IUUC-Bol-015903	Brassica oleracea	67.26	3.00e-166	578.00
IUUC-Cja-018989	Callithrix jacchus	45.18	4.00e-33	136.00
IUUC-Cfa-020629	Canis familiaris	45.18	3.00e-33	136.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	46.48	6.00e-26	111.00
IUUC-Csa-023750	Chlorocebus sabaeus	45.18	3.00e-33	136.00
IUUC-Cho-024581	Choloepus hoffmanni	46.76	5.00e-30	125.00
IUUC-Dor-031081	Dipodomys ordii	46.71	2.00e-32	134.00
IUUC-Eca-033670	Equus caballus	45.18	3.00e-33	136.00
IUUC-Eeu-035100	Erinaceus europaeus	41.57	2.00e-26	113.00
IUUC-Fca-036176	Felis catus	45.18	3.00e-33	136.00
IUUC-Ggr-039932	Gaeumannomyces graminis	36.14	6.00e-22	98.60
IUUC-Gac-042118	Gasterosteus aculeatus	40.33	2.00e-47	183.00
IUUC-Ggo-045641	Gorilla gorilla	45.18	3.00e-33	136.00
IUUC-Hsa-045751	Homo sapiens	45.18	3.00e-33	136.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	46.39	2.00e-33	137.00
IUUC-Laf-053643	Loxodonta africana	47.37	8.00e-33	135.00
IUUC-Mcc-055091	Macaca mulatta	45.18	3.00e-33	136.00
IUUC-Meu-056036	Macropus eugenii	41.57	2.00e-26	113.00
IUUC-Mpo-057385	Magnaporthe poae	32.43	6.00e-08	50.80
IUUC-Mmr-061602	Microcebus murinus	45.18	5.00e-33	135.00
IUUC-Mdo-062047	Monodelphis domestica	45.18	5.00e-33	135.00
IUUC-Mmu-063377	Mus musculus	46.71	7.00e-33	135.00
IUUC-Mpu-066047	Mustela putorius furo	45.18	3.00e-33	136.00
IUUC-Nfi-068434	Neosartorya fischeri	46.71	2.00e-28	120.00
IUUC-Nle-069540	Nomascus leucogenys	45.18	3.00e-33	136.00
IUUC-Opr-071157	Ochotona princeps	45.18	3.00e-33	136.00
IUUC-Oan-073616	Ornithorhynchus anatinus	51.92	4.00e-09	54.30
IUUC-Ocu-074002	Oryctolagus cuniculus	45.18	3.00e-33	136.00
IUUC-Olu-087794	Ostreococcus lucimarinus	44.92	3.00e-89	322.00
IUUC-Oga-088896	Otolemur garnettii	45.18	3.00e-33	136.00
IUUC-Oar-090155	Ovis aries	45.18	4.00e-33	136.00
IUUC-Ptr-090754	Pan troglodytes	45.18	3.00e-33	136.00
IUUC-Pan-092464	Papio anubis	45.18	3.00e-33	136.00
IUUC-Pma-094280	Petromyzon marinus	45.33	7.00e-31	128.00
IUUC-Ppa-095459	Physcomitrella patens	59.88	1.00e-149	523.00
IUUC-Pfo-096212	Poecilia formosa	47.37	2.00e-27	117.00
IUUC-Pab-098482	Pongo abelii	45.18	3.00e-33	136.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	43.11	2.00e-29	123.00
IUUC-Smo-108952	Selaginella moellendorffii	60.39	1.00e-103	370.00
IUUC-Sly-111621	Solanum lycopersicum	67.91	2.00e-166	578.00
IUUC-Stu-112579	Solanum tuberosum	66.54	3.00e-172	598.00
IUUC-Tsy-119219	Tarsius syrichta	41.57	1.00e-26	114.00
IUUC-Tbe-127271	Tupaia belangeri	42.76	3.00e-26	113.00
IUUC-Ttr-128433	Tursiops truncatus	40.20	2.00e-53	203.00
IUUC-Vda-130010	Verticillium dahliae	40.96	9.00e-24	104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence