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Tag Content
UUCD2 ID IUUC-Gga-041175
UUCD1 version UUC-GaG-00205
Ensembl Protein ID ENSGALP00000025437.4
UniProt Accession E1C231; LTN1_CHICK
Protein Name E3 ubiquitin-protein ligase listerin; RING finger protein 160; RING-type E3 ubiquitin transferase listerin
Genbank Nucleotide ID AC147443
Gene Name LTN1; RNF160
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000015804.5 ENSGALT00000025483.5 ENSGALP00000025437.4
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 67.27 0.00e+00 2229.00 IUUC-Hsa-047016
E3 activity/RING/RING 64.78 0.00e+00 2149.00 IUUC-Mmu-064389
E3 activity/RING/RING 37.56 3.00e-39 159.00 IUUC-Sce-106305
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Gallus gallus
Functional Description
(View)

Functional Description


     E3 ubiquitin-protein ligase. Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation. Ubiquitination leads to VCP/p97 recruitment for extraction and degradation of the incomplete translation product.
 E3 ubiquitin-protein ligase. Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation. Ubiquitination leads to VCP/p97 recruitment for extraction and degradation of the incomplete translation product.
Protein Sequence
(Fasta)
MGGKNKQRTK GNVRPSSSGR AAELLAKERG TVPGFIGFGT SQSDLGYVPA VQGAEEIDSL 60
VDADFRMVLR KLSKRDIITK LKAMQEFGTM CKEREAEVVK GVLPYWPRIY CKISLDHDRR 120
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Protein Fasta Sequence


>IUUC-Gga-041175|E3,RING|Gallus gallus
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Nucleotide Sequence
(Fasta)
CGCTGCCGTA GCCATGGGGG GCAAGAACAA GCAGCGGACC AAGGGCAACG TGCGGGTGAG 60
CGCAGCCGCC TTCCCGTCCT GCACCCCTCC GTGGGGCCGT CGCGCCGTCT TGCCCAGCCT 120
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Nucleotide Fasta Sequence


>IUUC-Gga-041175|E3,RING|Gallus gallus
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00744--RINGv
Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000717 Aegilops tauschii 41.35 5.00e-49 190.00
IUUC-Aml-002311 Ailuropoda melanoleuca 67.21 0.00e+00 2246.00
IUUC-Atr-002905 Amborella trichopoda 40.38 2.00e-49 192.00
IUUC-Apl-003323 Anas platyrhynchos 91.58 0.00e+00 3032.00
IUUC-Aca-004616 Anolis carolinensis 72.32 0.00e+00 2419.00
IUUC-Aly-006145 Arabidopsis lyrata 40.28 6.00e-47 183.00
IUUC-Ath-006844 Arabidopsis thaliana 41.71 1.00e-49 192.00
IUUC-Ago-007750 Ashbya gossypii 30.92 5.00e-44 173.00
IUUC-Acl-008369 Aspergillus clavatus 29.32 3.00e-39 157.00
IUUC-Afl-008540 Aspergillus flavus 32.78 3.00e-39 157.00
IUUC-Afu-009089 Aspergillus fumigatus 32.23 4.00e-39 157.00
IUUC-Ani-009292 Aspergillus nidulans 31.77 1.00e-38 155.00
IUUC-Ang-009715 Aspergillus niger 32.43 3.00e-35 144.00
IUUC-Aor-009887 Aspergillus oryzae 32.78 3.00e-39 157.00
IUUC-Ate-010308 Aspergillus terreus 26.89 7.00e-30 127.00
IUUC-Ame-011345 Astyanax mexicanus 56.69 0.00e+00 1817.00
IUUC-Bgr-012196 Blumeria graminis 23.47 5.00e-16 80.90
IUUC-Bta-012535 Bos taurus 66.55 0.00e+00 2243.00
IUUC-Bci-013630 Botrytis cinerea 31.48 3.00e-43 171.00
IUUC-Bdi-014142 Brachypodium distachyon 43.75 4.00e-52 200.00
IUUC-Bol-015333 Brassica oleracea 34.67 2.00e-47 185.00
IUUC-Cel-018254 Caenorhabditis elegans 43.75 5.00e-45 176.00
IUUC-Cja-019469 Callithrix jacchus 67.08 0.00e+00 2281.00
IUUC-Cfa-020640 Canis familiaris 67.00 0.00e+00 2270.00
IUUC-Cpo-021322 Cavia porcellus 62.09 0.00e+00 1825.00
IUUC-Cre-022677 Chlamydomonas reinhardtii 48.76 1.00e-34 141.00
IUUC-Csa-024234 Chlorocebus sabaeus 67.49 0.00e+00 2235.00
IUUC-Cho-024709 Choloepus hoffmanni 57.89 0.00e+00 1452.00
IUUC-Csv-026100 Ciona savignyi 33.21 1.00e-68 255.00
IUUC-Cgl-026598 Colletotrichum gloeosporioides 52.78 4.00e-21 92.00
IUUC-Cne-026789 Cryptococcus neoformans 32.36 7.00e-38 153.00
IUUC-Cme-027135 Cyanidioschyzon merolae 33.78 3.00e-12 68.90
IUUC-Dre-027405 Danio rerio 55.69 0.00e+00 1760.00
IUUC-Dno-029874 Dasypus novemcinctus 63.78 0.00e+00 1714.00
IUUC-Dor-030589 Dipodomys ordii 71.18 0.00e+00 1026.00
IUUC-Dse-031427 Dothistroma septosporum 33.22 1.00e-41 166.00
IUUC-Dme-031827 Drosophila melanogaster 30.63 2.00e-67 251.00
IUUC-Ete-032459 Echinops telfairi 48.62 0.00e+00 787.00
IUUC-Eca-033218 Equus caballus 67.21 0.00e+00 2254.00
IUUC-Eeu-035299 Erinaceus europaeus 53.91 0.00e+00 1321.00
IUUC-Fca-036081 Felis catus 67.10 0.00e+00 2258.00
IUUC-Fal-037561 Ficedula albicollis 89.24 0.00e+00 2951.00
IUUC-Fox-037930 Fusarium oxysporum 31.37 5.00e-42 167.00
IUUC-Fso-038413 Fusarium solani 30.03 8.00e-38 152.00
IUUC-Gmo-039359 Gadus morhua 52.18 0.00e+00 1652.00
IUUC-Ggr-039744 Gaeumannomyces graminis 30.90 1.00e-39 159.00
IUUC-Gac-041943 Gasterosteus aculeatus 51.73 0.00e+00 1665.00
IUUC-Gma-043888 Glycine max 40.67 3.00e-50 194.00
IUUC-Ggo-044912 Gorilla gorilla 62.86 0.00e+00 1274.00
IUUC-Hsa-047016 Homo sapiens 67.27 0.00e+00 2265.00
IUUC-Hvu-047059 Hordeum vulgare 42.31 3.00e-50 194.00
IUUC-Itr-048789 Ictidomys tridecemlineatus 69.67 0.00e+00 1072.00
IUUC-Kpa-049133 Komagataella pastoris 31.05 1.00e-39 159.00
IUUC-Lch-049879 Latimeria chalumnae 56.94 0.00e+00 1743.00
IUUC-Lpe-051455 Leersia perrieri 42.79 4.00e-51 197.00
IUUC-Loc-052799 Lepisosteus oculatus 59.50 0.00e+00 2013.00
IUUC-Lma-052972 Leptosphaeria maculans 32.33 2.00e-40 161.00
IUUC-Laf-053479 Loxodonta africana 65.64 0.00e+00 2220.00
IUUC-Mcc-055120 Macaca mulatta 67.36 0.00e+00 2274.00
IUUC-Meu-055932 Macropus eugenii 74.12 0.00e+00 760.00
IUUC-Mor-057209 Magnaporthe oryzae 33.66 7.00e-42 166.00
IUUC-Mpo-057581 Magnaporthe poae 30.23 9.00e-35 142.00
IUUC-Mtr-058499 Medicago truncatula 41.90 1.00e-51 199.00
IUUC-Mla-059169 Melampsora laricipopulina 47.76 2.00e-37 147.00
IUUC-Mga-059800 Meleagris gallopavo 96.89 0.00e+00 3244.00
IUUC-Mvi-060350 Microbotryum violaceum 35.83 1.00e-54 209.00
IUUC-Mmr-061548 Microcebus murinus 66.85 0.00e+00 2307.00
IUUC-Mdo-062405 Monodelphis domestica 67.79 0.00e+00 2219.00
IUUC-Mmu-064389 Mus musculus 64.72 0.00e+00 2148.00
IUUC-Mac-064596 Musa acuminata 39.66 1.00e-50 195.00
IUUC-Mpu-065687 Mustela putorius furo 67.04 0.00e+00 2283.00
IUUC-Mlu-067591 Myotis lucifugus 64.93 0.00e+00 2132.00
IUUC-Nfi-068298 Neosartorya fischeri 28.95 5.00e-39 157.00
IUUC-Ncr-068876 Neurospora crassa 31.08 1.00e-42 169.00
IUUC-Nle-069799 Nomascus leucogenys 67.64 0.00e+00 2262.00
IUUC-Opr-071155 Ochotona princeps 47.97 0.00e+00 756.00
IUUC-Ont-071290 Oreochromis niloticus 52.97 0.00e+00 1757.00
IUUC-Ocu-074947 Oryctolagus cuniculus 66.80 0.00e+00 2269.00
IUUC-Oba-075986 Oryza barthii 42.79 3.00e-51 197.00
IUUC-Obr-076304 Oryza brachyantha 42.86 2.00e-51 198.00
IUUC-Ogl-077600 Oryza glaberrima 42.79 4.00e-51 197.00
IUUC-Ogu-078079 Oryza glumaepatula 42.79 3.00e-51 197.00
IUUC-Oin-079935 Oryza indica 42.79 4.00e-51 197.00
IUUC-Olo-080897 Oryza longistaminata 42.79 4.00e-51 197.00
IUUC-Ome-081777 Oryza meridionalis 42.79 3.00e-51 197.00
IUUC-Oni-082298 Oryza nivara 42.79 3.00e-51 197.00
IUUC-Opu-083156 Oryza punctata 42.79 5.00e-51 197.00
IUUC-Oru-085243 Oryza rufipogon 42.79 3.00e-51 197.00
IUUC-Osa-086219 Oryza sativa 42.79 4.00e-51 197.00
IUUC-Ola-087202 Oryzias latipes 51.37 0.00e+00 1655.00
IUUC-Olu-087800 Ostreococcus lucimarinus 33.90 1.00e-42 169.00
IUUC-Oga-088962 Otolemur garnettii 66.91 0.00e+00 2302.00
IUUC-Oar-089858 Ovis aries 66.50 0.00e+00 2256.00
IUUC-Ptr-090958 Pan troglodytes 67.60 0.00e+00 2281.00
IUUC-Pan-092712 Papio anubis 67.42 0.00e+00 2299.00
IUUC-Psi-093557 Pelodiscus sinensis 79.79 0.00e+00 2801.00
IUUC-Pma-094131 Petromyzon marinus 58.47 3.00e-138 484.00
IUUC-Pno-094947 Phaeosphaeria nodorum 32.65 9.00e-39 156.00
IUUC-Ppa-095258 Physcomitrella patens 42.65 6.00e-53 203.00
IUUC-Pfo-097035 Poecilia formosa 52.28 0.00e+00 1649.00
IUUC-Pab-097897 Pongo abelii 66.59 0.00e+00 2137.00
IUUC-Pop-099487 Populus trichocarpa 40.87 8.00e-49 189.00
IUUC-Pca-100688 Procavia capensis 49.96 0.00e+00 965.00
IUUC-Ppe-101821 Prunus persica 39.90 4.00e-50 194.00
IUUC-Pva-102632 Pteropus vampyrus 64.60 0.00e+00 1456.00
IUUC-Pgr-103311 Puccinia graminis 34.08 1.00e-50 196.00
IUUC-Ptt-103825 Puccinia triticina 32.86 9.00e-44 172.00
IUUC-Pte-104036 Pyrenophora teres 31.67 8.00e-41 163.00
IUUC-Pyt-104460 Pyrenophora triticirepentis 32.14 6.00e-41 163.00
IUUC-Rno-104852 Rattus norvegicus 65.37 0.00e+00 2223.00
IUUC-Sce-106305 Saccharomyces cerevisiae 31.35 2.00e-46 181.00
IUUC-Sja-107896 Schizosaccharomyces japonicus 38.97 1.00e-43 172.00
IUUC-Spo-108267 Schizosaccharomyces pombe 34.92 9.00e-46 179.00
IUUC-Smo-109180 Selaginella moellendorffii 36.59 1.00e-50 196.00
IUUC-Sit-110615 Setaria italica 41.12 2.00e-50 194.00
IUUC-Sly-111861 Solanum lycopersicum 42.31 4.00e-51 197.00
IUUC-Stu-112373 Solanum tuberosum 42.31 3.00e-51 197.00
IUUC-Sar-113666 Sorex araneus 61.14 0.00e+00 1646.00
IUUC-Sbi-114597 Sorghum bicolor 42.79 3.00e-51 198.00
IUUC-Sre-114965 Sporisorium reilianum 33.90 7.00e-48 186.00
IUUC-Ssc-115866 Sus scrofa 66.87 0.00e+00 2297.00
IUUC-Tgu-117521 Taeniopygia guttata 87.57 0.00e+00 2957.00
IUUC-Tru-117803 Takifugu rubripes 50.48 0.00e+00 1619.00
IUUC-Tsy-119135 Tarsius syrichta 61.29 0.00e+00 1595.00
IUUC-Tni-119807 Tetraodon nigroviridis 50.11 0.00e+00 1553.00
IUUC-Tca-121036 Theobroma cacao 41.67 2.00e-50 194.00
IUUC-Tre-121942 Trichoderma reesei 30.98 2.00e-41 164.00
IUUC-Tvi-122453 Trichoderma virens 30.56 6.00e-40 160.00
IUUC-Tae-123061 Triticum aestivum 41.35 5.00e-49 190.00
IUUC-Tur-126021 Triticum urartu 41.35 5.00e-49 190.00
IUUC-Tme-126889 Tuber melanosporum 32.12 9.00e-46 179.00
IUUC-Tbe-127297 Tupaia belangeri 50.68 0.00e+00 750.00
IUUC-Ttr-128745 Tursiops truncatus 66.76 0.00e+00 2263.00
IUUC-Uma-129552 Ustilago maydis 32.63 4.00e-49 191.00
IUUC-Vda-129838 Verticillium dahliae 30.33 3.00e-42 167.00
IUUC-Vpa-130567 Vicugna pacos 65.75 0.00e+00 1172.00
IUUC-Vvi-131418 Vitis vinifera 41.35 5.00e-52 200.00
IUUC-Xtr-132926 Xenopus tropicalis 63.21 0.00e+00 2164.00
IUUC-Xma-134278 Xiphophorus maculatus 52.38 0.00e+00 1658.00
IUUC-Yli-134476 Yarrowia lipolytica 36.52 3.00e-49 191.00
IUUC-Zma-135611 Zea mays 42.79 3.00e-51 197.00
Created Date 25-Jun-2017

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