iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116820

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01004984

Gene Name

RNF138

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000010755.1	ENSTGUT00000011204.1	ENSTGUP00000011084.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	31.7	8	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C+e fk+++++ +C+Hvf+++C+  ++           +CPlCr
   Q: 8    CPVCQEVFKTPVRTANCQHVFCRKCFlTAI------RESGTHCPLCR 48
           *************************96777......777777****8 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

FSEDDFYCPV CQEVFKTPVR TANCQHVFCR KCFLTAIRES GTHCPLCRGS VTKKERTYPK 60
RALDVENSMK KASGGCRCCE KQVRFSWMRQ HYKTCKKYQD EYGVSSIMPK LQISQDATGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAGCGAGG ATGATTTTTA CTGCCCGGTG TGCCAGGAGG TGTTCAAAAC GCCCGTGAGG 60
ACCGCCAACT GCCAGCACGT GTGGGTATCC CGACCCCCGC CCCTTCCCAA GCCTTTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008598--Di19_Zn_binding_dom
IPR034734--ZF_C2HC_RNF
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51803--ZF_C2HC_RNF
PS50089--ZF_RING_2

Pfam

PF05605--zf-Di19

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:0003697--F:single-stranded DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0000724--P:double-strand break repair via homologous recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001267	Ailuropoda melanoleuca	70.21	2.00e-99	354.00
IUUC-Apl-003941	Anas platyrhynchos	81.74	1.00e-105	375.00
IUUC-Aca-005233	Anolis carolinensis	65.83	7.00e-96	343.00
IUUC-Bta-012999	Bos taurus	71.91	2.00e-101	361.00
IUUC-Cja-019489	Callithrix jacchus	70.64	2.00e-100	357.00
IUUC-Cfa-020567	Canis familiaris	68.18	4.00e-80	290.00
IUUC-Cpo-022165	Cavia porcellus	71.06	1.00e-100	358.00
IUUC-Csa-024096	Chlorocebus sabaeus	71.06	8.00e-101	358.00
IUUC-Cho-024686	Choloepus hoffmanni	62.80	2.00e-73	268.00
IUUC-Dno-029625	Dasypus novemcinctus	71.49	1.00e-101	361.00
IUUC-Dor-030983	Dipodomys ordii	59.40	4.00e-78	283.00
IUUC-Ete-032453	Echinops telfairi	75.00	4.00e-52	197.00
IUUC-Eca-034367	Equus caballus	69.23	1.00e-85	308.00
IUUC-Eeu-034722	Erinaceus europaeus	56.72	6.00e-62	229.00
IUUC-Fca-036590	Felis catus	71.06	1.00e-100	358.00
IUUC-Fal-037287	Ficedula albicollis	88.43	1.00e-123	435.00
IUUC-Fox-037926	Fusarium oxysporum	49.02	5.00e-09	54.30
IUUC-Gga-041055	Gallus gallus	84.39	4.00e-119	419.00
IUUC-Ggo-045324	Gorilla gorilla	70.64	3.00e-100	357.00
IUUC-Hsa-046364	Homo sapiens	70.64	3.00e-100	357.00
IUUC-Itr-048181	Ictidomys tridecemlineatus	70.94	2.00e-100	357.00
IUUC-Loc-052428	Lepisosteus oculatus	36.44	3.00e-43	167.00
IUUC-Laf-054506	Loxodonta africana	70.64	3.00e-100	357.00
IUUC-Mcc-054595	Macaca mulatta	69.23	5.00e-85	306.00
IUUC-Meu-056101	Macropus eugenii	32.44	2.00e-21	95.10
IUUC-Mga-060068	Meleagris gallopavo	82.86	6.00e-118	416.00
IUUC-Mmr-061516	Microcebus murinus	70.46	1.00e-99	355.00
IUUC-Mdo-062243	Monodelphis domestica	72.46	1.00e-102	365.00
IUUC-Mmu-063719	Mus musculus	69.36	2.00e-99	354.00
IUUC-Mpu-065869	Mustela putorius furo	71.06	1.00e-100	358.00
IUUC-Mlu-068157	Myotis lucifugus	68.75	2.00e-85	307.00
IUUC-Nle-069538	Nomascus leucogenys	58.97	5.00e-76	276.00
IUUC-Opr-070640	Ochotona princeps	70.64	4.00e-100	357.00
IUUC-Oan-072919	Ornithorhynchus anatinus	66.83	2.00e-74	271.00
IUUC-Ocu-074897	Oryctolagus cuniculus	70.21	7.00e-100	355.00
IUUC-Oga-088165	Otolemur garnettii	70.64	8.00e-100	355.00
IUUC-Oar-090364	Ovis aries	68.84	2.00e-80	291.00
IUUC-Ptr-090784	Pan troglodytes	70.64	3.00e-100	357.00
IUUC-Pan-091874	Papio anubis	71.06	8.00e-101	358.00
IUUC-Psi-093531	Pelodiscus sinensis	78.57	7.00e-106	375.00
IUUC-Pab-098013	Pongo abelii	70.64	3.00e-100	357.00
IUUC-Pca-100822	Procavia capensis	65.26	6.00e-80	289.00
IUUC-Pva-102936	Pteropus vampyrus	69.36	9.00e-100	355.00
IUUC-Rno-106110	Rattus norvegicus	50.21	3.00e-59	220.00
IUUC-Sha-107403	Sarcophilus harrisii	69.35	4.00e-81	293.00
IUUC-Sar-113678	Sorex araneus	68.67	8.00e-32	129.00
IUUC-Sre-115193	Sporisorium reilianum	38.10	3.00e-07	50.10
IUUC-Ssc-116192	Sus scrofa	71.06	1.00e-100	358.00
IUUC-Tsy-119211	Tarsius syrichta	55.29	1.00e-61	228.00
IUUC-Tbe-127480	Tupaia belangeri	48.51	1.00e-55	209.00
IUUC-Ttr-128859	Tursiops truncatus	70.51	4.00e-100	356.00
IUUC-Uma-129518	Ustilago maydis	38.10	2.00e-07	51.20
IUUC-Vda-129783	Verticillium dahliae	46.94	3.00e-08	52.80
IUUC-Vpa-130682	Vicugna pacos	67.66	3.00e-91	327.00
IUUC-Xtr-131796	Xenopus tropicalis	49.56	1.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence