iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088023

Ensembl Protein ID

ENSOGAP00000012736.2

UniProt Accession

H0XAS1; H0XAS1_OTOGA

Genbank Protein ID

ENSOGAP00000012736

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03034015

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000014216.2	ENSOGAT00000014216.2	ENSOGAP00000012736.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.60e-19	69.3	190	227
ULD/UDP/UBQ/UBQ_PIM	2.30e-27	94.8	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 190  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 227
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++++++++tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MQVTLKTLQQ QTFKIDIDPE ETVKALKEKI ESEKGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKAV STPAPAAAAA QQSNPVTTTP VTSSTATTVA QAPTPAPAPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGATGATGG CGGCTACCAT CCTGTGGTGA GCTAGCGGAT TCTTTCCTTG CCTCGCAACG 60
TCCCTCGCTC CTCCTGCAGA TTCAGTGGCC GGCACCCGGC GCGAGAAGCA GCACGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	34.52	2.00e-32	133.00
IUUC-Aml-001195	Ailuropoda melanoleuca	88.58	4.00e-93	334.00
IUUC-Apl-003371	Anas platyrhynchos	73.37	3.00e-120	424.00
IUUC-Aca-004599	Anolis carolinensis	84.38	4.00e-94	338.00
IUUC-Aly-006159	Arabidopsis lyrata	34.05	1.00e-53	203.00
IUUC-Ath-006674	Arabidopsis thaliana	36.54	3.00e-39	155.00
IUUC-Afu-008877	Aspergillus fumigatus	45.26	2.00e-18	87.00
IUUC-Ate-010458	Aspergillus terreus	40.87	5.00e-30	125.00
IUUC-Ame-011107	Astyanax mexicanus	65.98	3.00e-55	209.00
IUUC-Bta-012922	Bos taurus	92.96	1.00e-95	343.00
IUUC-Bol-016493	Brassica oleracea	35.32	4.00e-36	145.00
IUUC-Bra-017582	Brassica rapa	36.51	9.00e-36	144.00
IUUC-Cja-018772	Callithrix jacchus	88.62	3.00e-138	484.00
IUUC-Cfa-020683	Canis familiaris	89.63	6.00e-102	364.00
IUUC-Cpo-022145	Cavia porcellus	85.71	3.00e-137	481.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.20	2.00e-29	123.00
IUUC-Csa-023714	Chlorocebus sabaeus	89.35	6.00e-156	543.00
IUUC-Cho-024814	Choloepus hoffmanni	71.28	3.00e-81	295.00
IUUC-Cin-025741	Ciona intestinalis	40.54	6.00e-37	147.00
IUUC-Csv-025823	Ciona savignyi	39.17	3.00e-42	165.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	52.00	1.00e-16	80.50
IUUC-Cne-027056	Cryptococcus neoformans	47.44	2.00e-15	76.60
IUUC-Dre-028369	Danio rerio	71.88	1.00e-82	300.00
IUUC-Dno-029543	Dasypus novemcinctus	94.44	2.00e-102	365.00
IUUC-Dse-031336	Dothistroma septosporum	46.38	3.00e-17	82.80
IUUC-Ete-032583	Echinops telfairi	79.08	3.00e-64	238.00
IUUC-Eca-034243	Equus caballus	91.63	2.00e-93	335.00
IUUC-Eeu-034721	Erinaceus europaeus	86.88	3.00e-73	268.00
IUUC-Fca-035679	Felis catus	92.59	7.00e-97	347.00
IUUC-Fal-037148	Ficedula albicollis	80.72	1.00e-91	330.00
IUUC-Fox-037960	Fusarium oxysporum	42.34	2.00e-15	76.60
IUUC-Fso-038107	Fusarium solani	52.63	1.00e-16	80.50
IUUC-Gmo-039080	Gadus morhua	62.55	3.00e-59	221.00
IUUC-Ggr-040116	Gaeumannomyces graminis	45.26	9.00e-16	77.80
IUUC-Gga-040544	Gallus gallus	71.32	8.00e-124	436.00
IUUC-Gma-043835	Glycine max	35.45	5.00e-40	158.00
IUUC-Ggo-045125	Gorilla gorilla	94.88	6.00e-101	360.00
IUUC-Hsa-046519	Homo sapiens	94.88	6.00e-101	360.00
IUUC-Hvu-047832	Hordeum vulgare	36.08	5.00e-33	135.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	86.44	4.00e-126	444.00
IUUC-Kpa-049314	Komagataella pastoris	36.97	6.00e-30	124.00
IUUC-Lch-050553	Latimeria chalumnae	66.09	5.00e-100	357.00
IUUC-Lpe-050801	Leersia perrieri	36.33	1.00e-34	140.00
IUUC-Loc-051748	Lepisosteus oculatus	69.49	6.00e-76	277.00
IUUC-Lma-053328	Leptosphaeria maculans	48.68	1.00e-13	67.00
IUUC-Laf-054293	Loxodonta africana	94.07	2.00e-98	352.00
IUUC-Mcc-055600	Macaca mulatta	93.33	2.00e-109	388.00
IUUC-Meu-056082	Macropus eugenii	66.19	1.00e-68	253.00
IUUC-Mor-057287	Magnaporthe oryzae	50.00	3.00e-16	79.30
IUUC-Mpo-057609	Magnaporthe poae	45.45	3.00e-15	75.50
IUUC-Mtr-058148	Medicago truncatula	37.79	9.00e-41	160.00
IUUC-Mla-058961	Melampsora laricipopulina	47.79	5.00e-25	108.00
IUUC-Mga-060060	Meleagris gallopavo	45.36	1.00e-16	80.10
IUUC-Mvi-060220	Microbotryum violaceum	44.36	1.00e-22	101.00
IUUC-Mmr-061159	Microcebus murinus	95.10	3.00e-96	345.00
IUUC-Mdo-061967	Monodelphis domestica	91.01	8.00e-88	317.00
IUUC-Mmu-063258	Mus musculus	91.94	2.00e-113	402.00
IUUC-Mpu-066389	Mustela putorius furo	87.40	2.00e-93	335.00
IUUC-Mlu-067999	Myotis lucifugus	92.22	2.00e-98	352.00
IUUC-Nfi-068390	Neosartorya fischeri	45.26	1.00e-18	87.00
IUUC-Ncr-068685	Neurospora crassa	43.80	6.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	88.62	1.00e-148	519.00
IUUC-Opr-070234	Ochotona princeps	77.78	4.00e-29	122.00
IUUC-Oan-073258	Ornithorhynchus anatinus	88.17	3.00e-51	194.00
IUUC-Ocu-074831	Oryctolagus cuniculus	94.07	2.00e-98	352.00
IUUC-Obr-076909	Oryza brachyantha	37.40	1.00e-37	150.00
IUUC-Ogu-078101	Oryza glumaepatula	35.09	2.00e-35	142.00
IUUC-Oin-079203	Oryza indica	32.55	5.00e-51	194.00
IUUC-Ome-081652	Oryza meridionalis	35.09	2.00e-35	142.00
IUUC-Opu-083789	Oryza punctata	35.06	9.00e-36	144.00
IUUC-Osa-085951	Oryza sativa	32.55	5.00e-51	194.00
IUUC-Ola-086540	Oryzias latipes	64.11	4.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	40.97	1.00e-38	154.00
IUUC-Oar-089964	Ovis aries	90.37	8.00e-94	337.00
IUUC-Ptr-091165	Pan troglodytes	92.52	1.00e-100	359.00
IUUC-Pan-092009	Papio anubis	88.46	2.00e-148	518.00
IUUC-Psi-093477	Pelodiscus sinensis	86.86	6.00e-90	324.00
IUUC-Ppa-095964	Physcomitrella patens	42.65	2.00e-27	116.00
IUUC-Pfo-097385	Poecilia formosa	63.03	3.00e-72	265.00
IUUC-Pab-097868	Pongo abelii	92.91	4.00e-100	357.00
IUUC-Pop-099416	Populus trichocarpa	34.39	9.00e-40	157.00
IUUC-Pca-100652	Procavia capensis	89.66	2.00e-68	252.00
IUUC-Pva-102137	Pteropus vampyrus	94.33	1.00e-98	353.00
IUUC-Ptt-103717	Puccinia triticina	44.20	5.00e-25	108.00
IUUC-Pte-104303	Pyrenophora teres	48.57	1.00e-19	90.90
IUUC-Pyt-104580	Pyrenophora triticirepentis	48.57	2.00e-19	90.10
IUUC-Rno-104844	Rattus norvegicus	86.57	6.00e-154	536.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.04	2.00e-13	70.10
IUUC-Sha-107073	Sarcophilus harrisii	95.40	1.00e-88	319.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.13	3.00e-38	152.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	42.61	1.00e-16	80.90
IUUC-Sar-112925	Sorex araneus	84.50	3.00e-88	318.00
IUUC-Ssc-116329	Sus scrofa	94.07	1.00e-100	360.00
IUUC-Tgu-116918	Taeniopygia guttata	79.61	6.00e-93	334.00
IUUC-Tru-118651	Takifugu rubripes	60.15	3.00e-74	271.00
IUUC-Tsy-118836	Tarsius syrichta	95.68	2.00e-47	182.00
IUUC-Tre-121911	Trichoderma reesei	45.45	4.00e-16	78.60
IUUC-Tvi-122617	Trichoderma virens	52.56	2.00e-18	86.30
IUUC-Tae-125620	Triticum aestivum	34.27	2.00e-36	146.00
IUUC-Tur-126610	Triticum urartu	34.52	4.00e-33	135.00
IUUC-Tme-127092	Tuber melanosporum	35.50	1.00e-26	114.00
IUUC-Tbe-127493	Tupaia belangeri	81.39	3.00e-69	255.00
IUUC-Ttr-128464	Tursiops truncatus	93.70	1.00e-100	359.00
IUUC-Uma-129484	Ustilago maydis	47.54	9.00e-12	64.70
IUUC-Vpa-130357	Vicugna pacos	88.41	3.00e-64	238.00
IUUC-Vvi-130842	Vitis vinifera	35.55	2.00e-38	153.00
IUUC-Xtr-132679	Xenopus tropicalis	79.38	3.00e-69	255.00
IUUC-Yli-134615	Yarrowia lipolytica	41.36	1.00e-36	146.00
IUUC-Zma-135929	Zea mays	30.66	6.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence