iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-089156

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03107979

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000033288.1	ENSOGAT00000030844.1	ENSOGAP00000019836.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-06	27.2	21	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C iCle ++  p++lpC H++++dCl q +      + ++ rCP Cr
   Q: 21   CKICLEQLQM-PKTLPCLHTYCQDCLaQLV------EGGHVRCPECR 60
           99******99.***************6666......**********8 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MVSQGSSPSL LEALSSDFLA CKICLEQLQM PKTLPCLHTY CQDCLAQLVE GGHVRCPECR 60
ETVPVPPTGV AAFKTNFFVN GLLDLVKARG SGDLRMGKPA CALCPLVGGT SAGGPATARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCCC AGGGCTCCTC ACCCTCCCTG CTGGAGGCCC TAAGCAGTGA CTTCCTGGCC 60
TGTAAGATCT GTCTGGAGCA GCTGCAGATG CCCAAGACGC TGCCCTGCCT GCACACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	84.91	0.00e+00	1082.00
IUUC-Aca-004996	Anolis carolinensis	48.63	2.00e-80	293.00
IUUC-Bta-012368	Bos taurus	82.67	0.00e+00	1100.00
IUUC-Cja-019698	Callithrix jacchus	85.71	0.00e+00	1140.00
IUUC-Csa-023090	Chlorocebus sabaeus	86.24	0.00e+00	1080.00
IUUC-Dno-030051	Dasypus novemcinctus	77.08	0.00e+00	978.00
IUUC-Ete-032312	Echinops telfairi	87.10	6.00e-94	336.00
IUUC-Eca-033253	Equus caballus	89.71	9.00e-108	382.00
IUUC-Eeu-034772	Erinaceus europaeus	78.26	1.00e-51	196.00
IUUC-Fca-036198	Felis catus	74.64	0.00e+00	907.00
IUUC-Ggo-045486	Gorilla gorilla	85.58	0.00e+00	1073.00
IUUC-Hsa-046238	Homo sapiens	85.45	0.00e+00	1067.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	82.41	0.00e+00	1023.00
IUUC-Loc-052915	Lepisosteus oculatus	30.37	5.00e-73	269.00
IUUC-Laf-053640	Loxodonta africana	81.60	0.00e+00	1030.00
IUUC-Mcc-055540	Macaca mulatta	85.85	0.00e+00	1088.00
IUUC-Mmr-060840	Microcebus murinus	87.57	0.00e+00	1130.00
IUUC-Mmu-064375	Mus musculus	75.53	0.00e+00	1014.00
IUUC-Mpu-066797	Mustela putorius furo	84.20	0.00e+00	1088.00
IUUC-Mlu-067996	Myotis lucifugus	84.42	0.00e+00	1105.00
IUUC-Nle-069238	Nomascus leucogenys	91.54	1.00e-116	412.00
IUUC-Oar-090056	Ovis aries	79.71	0.00e+00	1008.00
IUUC-Ptr-090837	Pan troglodytes	82.07	0.00e+00	632.00
IUUC-Psi-093493	Pelodiscus sinensis	47.33	2.00e-61	230.00
IUUC-Pab-097607	Pongo abelii	85.45	0.00e+00	1090.00
IUUC-Pva-102758	Pteropus vampyrus	82.01	0.00e+00	1062.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence