iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000007083.1	ENSSHAT00000008240.1	ENSSHAP00000008173.1
ENSSHAG00000007083.1	ENSSHAT00000008241.1	ENSSHAP00000008174.1
ENSSHAG00000007083.1	ENSSHAT00000008242.1	ENSSHAP00000008175.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	2.30e-17	62.8	214	267
UBD/Alpha-Helix/VHS	1.30e-55	187.1	16	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 3    kekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFve 60
            +kv++lyd+ea++d+eLt+k+G+++ v+  ++ d++W+kg  e +   GlfP+nFv 
   Q: 214  SKKVRALYDFEAVEDNELTFKSGEIIIVL--DDSDANWWKG--ENHRGVGLFPSNFVS 267
           589*************************9..99********..99999********96 PP

UBD/Alpha-Helix/VHS

   S: 1    atselvtsedwelileicdliqetkegakdalralrkrinnknphvalraLtlLdscvsnCgkkfhvevaskdlleelrellknenepk 89
           at+e++tsedw li++icd++++t +ga+d+l+a++kr+n+k phval+aLtlL++cvsnCgk+fh+ev+s+d+++e+r+++kn+++pk
   Q: 16   ATNEYNTSEDWGLIMDICDKVGSTPNGARDCLKAIMKRVNHKVPHVALQALTLLGACVSNCGKIFHLEVCSRDFATEVRGVIKNKAHPK 104
           799************************************************************************************** PP
   S: 90   vieKlkalivsWadelknepalslivaliktlkeeGlefp 129
           v+eKlk+l+v+W++e++++p++sli+a+ik++keeG++fp
   Q: 105  VCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFP 144
           ***************************************8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

SPLLPYSPLL MFAEKATNEY NTSEDWGLIM DICDKVGSTP NGARDCLKAI MKRVNHKVPH 60
VALQALTLLG ACVSNCGKIF HLEVCSRDFA TEVRGVIKNK AHPKVCEKLK SLMVEWSEEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCTTGT TCACGCCCAA TCCTTTTGAG CAGGATGTTG GTGAGTCACG GGGGCAGGCC 60
CTGGGCTATG GGAGCTATTC TCCTGGAGAC GGGGCCGGGG TGAGAAGGGG CGGCGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008942--ENTH_VHS
IPR001452--SH3_domain
IPR002014--VHS_dom

PROSITE

PS50002--SH3
PS50179--VHS

Pfam

PF00018--SH3_1
PF00790--VHS

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00288--VHS

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002079	Ailuropoda melanoleuca	83.49	0.00e+00	893.00
IUUC-Apl-003548	Anas platyrhynchos	77.06	0.00e+00	772.00
IUUC-Aca-004991	Anolis carolinensis	74.58	0.00e+00	699.00
IUUC-Ago-007874	Ashbya gossypii	24.23	3.00e-27	115.00
IUUC-Acl-008046	Aspergillus clavatus	24.89	2.00e-33	137.00
IUUC-Afl-008621	Aspergillus flavus	26.41	9.00e-37	148.00
IUUC-Ate-010532	Aspergillus terreus	25.94	3.00e-33	136.00
IUUC-Ame-011913	Astyanax mexicanus	57.06	5.00e-163	567.00
IUUC-Bgr-012113	Blumeria graminis	26.59	3.00e-35	143.00
IUUC-Bta-013115	Bos taurus	83.95	9.00e-179	619.00
IUUC-Cja-018846	Callithrix jacchus	83.77	0.00e+00	919.00
IUUC-Cfa-020589	Canis familiaris	84.53	0.00e+00	895.00
IUUC-Cpo-021460	Cavia porcellus	80.61	0.00e+00	854.00
IUUC-Csa-023912	Chlorocebus sabaeus	85.21	0.00e+00	939.00
IUUC-Cho-024297	Choloepus hoffmanni	85.60	0.00e+00	899.00
IUUC-Cne-027007	Cryptococcus neoformans	34.27	7.00e-18	85.50
IUUC-Dre-027454	Danio rerio	57.83	2.00e-159	555.00
IUUC-Dno-029182	Dasypus novemcinctus	83.90	0.00e+00	914.00
IUUC-Dor-030949	Dipodomys ordii	75.11	0.00e+00	674.00
IUUC-Eca-033544	Equus caballus	86.96	0.00e+00	876.00
IUUC-Eeu-035224	Erinaceus europaeus	75.05	0.00e+00	746.00
IUUC-Fca-035958	Felis catus	84.99	0.00e+00	912.00
IUUC-Fal-037193	Ficedula albicollis	69.16	0.00e+00	670.00
IUUC-Ggr-040048	Gaeumannomyces graminis	26.37	2.00e-33	137.00
IUUC-Gga-041158	Gallus gallus	74.57	0.00e+00	773.00
IUUC-Ggo-044661	Gorilla gorilla	83.49	0.00e+00	909.00
IUUC-Hsa-046959	Homo sapiens	85.02	0.00e+00	937.00
IUUC-Itr-048399	Ictidomys tridecemlineatus	87.69	0.00e+00	703.00
IUUC-Kpa-049200	Komagataella pastoris	27.54	2.00e-26	113.00
IUUC-Lch-050505	Latimeria chalumnae	70.79	0.00e+00	748.00
IUUC-Loc-051737	Lepisosteus oculatus	61.80	0.00e+00	642.00
IUUC-Laf-053943	Loxodonta africana	83.52	0.00e+00	915.00
IUUC-Mcc-055609	Macaca mulatta	85.21	0.00e+00	939.00
IUUC-Meu-056575	Macropus eugenii	74.75	0.00e+00	737.00
IUUC-Mga-059462	Meleagris gallopavo	74.90	0.00e+00	755.00
IUUC-Mvi-060560	Microbotryum violaceum	33.33	2.00e-19	91.30
IUUC-Mmr-061756	Microcebus murinus	72.06	0.00e+00	691.00
IUUC-Mdo-062314	Monodelphis domestica	92.70	0.00e+00	1021.00
IUUC-Mmu-064020	Mus musculus	77.53	0.00e+00	831.00
IUUC-Mpu-066320	Mustela putorius furo	86.39	0.00e+00	872.00
IUUC-Mlu-067472	Myotis lucifugus	84.11	0.00e+00	904.00
IUUC-Nle-070035	Nomascus leucogenys	84.64	0.00e+00	933.00
IUUC-Opr-070584	Ochotona princeps	64.61	0.00e+00	670.00
IUUC-Ont-072419	Oreochromis niloticus	57.23	2.00e-153	535.00
IUUC-Oan-072727	Ornithorhynchus anatinus	81.01	3.00e-150	524.00
IUUC-Ocu-074576	Oryctolagus cuniculus	76.67	0.00e+00	835.00
IUUC-Oga-089079	Otolemur garnettii	69.14	0.00e+00	687.00
IUUC-Oar-089306	Ovis aries	83.96	0.00e+00	889.00
IUUC-Ptr-090536	Pan troglodytes	85.02	0.00e+00	938.00
IUUC-Pan-092172	Papio anubis	84.86	0.00e+00	932.00
IUUC-Psi-094026	Pelodiscus sinensis	74.90	0.00e+00	723.00
IUUC-Pfo-096200	Poecilia formosa	56.89	4.00e-153	534.00
IUUC-Pab-098151	Pongo abelii	84.44	0.00e+00	897.00
IUUC-Pca-100361	Procavia capensis	83.79	9.00e-146	509.00
IUUC-Pva-103093	Pteropus vampyrus	83.71	0.00e+00	888.00
IUUC-Rno-105275	Rattus norvegicus	75.28	0.00e+00	792.00
IUUC-Spo-108333	Schizosaccharomyces pombe	28.02	6.00e-31	127.00
IUUC-Sar-113125	Sorex araneus	70.71	0.00e+00	728.00
IUUC-Sre-115010	Sporisorium reilianum	39.37	3.00e-19	90.10
IUUC-Ssc-116366	Sus scrofa	84.77	0.00e+00	858.00
IUUC-Tgu-117414	Taeniopygia guttata	74.84	0.00e+00	669.00
IUUC-Tsy-119199	Tarsius syrichta	84.83	0.00e+00	930.00
IUUC-Tni-120765	Tetraodon nigroviridis	63.78	1.00e-140	493.00
IUUC-Tre-122061	Trichoderma reesei	26.82	2.00e-35	143.00
IUUC-Tbe-127343	Tupaia belangeri	81.62	0.00e+00	690.00
IUUC-Ttr-128960	Tursiops truncatus	82.95	0.00e+00	852.00
IUUC-Uma-129613	Ustilago maydis	39.37	1.00e-19	90.90
IUUC-Vpa-130600	Vicugna pacos	79.85	0.00e+00	845.00
IUUC-Xtr-132472	Xenopus tropicalis	67.61	0.00e+00	696.00
IUUC-Xma-133716	Xiphophorus maculatus	55.71	3.00e-148	518.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence