iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-035697

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02117218

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000030517.1	ENSFCAT00000029329.1	ENSFCAP00000025007.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.40e-16	60.1	144	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 144  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 191
           67899.**********************888...***************986 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MQTIWSPKLL IGIDYKTTTI LLDGRRVKLE LWDTSGQGRF CTIFRSYSRG AQGILLVYDI 60
TNRWSFDGID RWIKEIDEHA PGVPRILVGN RLHLAFKRQV PTEQARAYAE KNGMTFFEVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAACGCG GGGAGGGCGG CTCCCGAGAG CACAGTTCCA GGGGGGCTCT CTGCCCTCTC 60
TGAGGTCTCT GCGGGAGTAG CGACCGCAAC TTGTTAGAGG CTTAAGTCCT CCGGGACCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	99.11	2.00e-116	411.00
IUUC-Apl-003799	Anas platyrhynchos	90.57	3.00e-127	447.00
IUUC-Ame-011203	Astyanax mexicanus	94.44	2.00e-126	445.00
IUUC-Bta-013490	Bos taurus	99.15	1.00e-121	428.00
IUUC-Cja-019990	Callithrix jacchus	98.71	9.00e-121	426.00
IUUC-Cpo-022437	Cavia porcellus	99.10	8.00e-114	403.00
IUUC-Csa-024147	Chlorocebus sabaeus	99.15	2.00e-121	428.00
IUUC-Dre-027427	Danio rerio	94.02	2.00e-126	444.00
IUUC-Dno-029998	Dasypus novemcinctus	92.34	8.00e-116	412.00
IUUC-Dor-030584	Dipodomys ordii	89.27	5.00e-107	379.00
IUUC-Dme-031810	Drosophila melanogaster	71.67	7.00e-80	289.00
IUUC-Ete-033080	Echinops telfairi	96.15	2.00e-113	401.00
IUUC-Eca-033423	Equus caballus	98.29	3.00e-124	437.00
IUUC-Eeu-034590	Erinaceus europaeus	89.27	5.00e-110	389.00
IUUC-Fal-037070	Ficedula albicollis	97.86	5.00e-121	426.00
IUUC-Gmo-039605	Gadus morhua	92.31	1.00e-124	439.00
IUUC-Gga-040343	Gallus gallus	97.86	5.00e-121	426.00
IUUC-Gac-041833	Gasterosteus aculeatus	86.61	3.00e-118	417.00
IUUC-Hsa-046237	Homo sapiens	99.15	2.00e-121	428.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	99.15	1.00e-121	428.00
IUUC-Lch-050193	Latimeria chalumnae	94.87	2.00e-126	444.00
IUUC-Loc-052243	Lepisosteus oculatus	94.02	2.00e-126	444.00
IUUC-Laf-054435	Loxodonta africana	97.01	4.00e-121	427.00
IUUC-Mcc-055337	Macaca mulatta	99.15	2.00e-121	428.00
IUUC-Meu-056731	Macropus eugenii	96.41	6.00e-79	286.00
IUUC-Mga-060027	Meleagris gallopavo	97.45	5.00e-121	426.00
IUUC-Mmr-061380	Microcebus murinus	99.57	9.00e-122	429.00
IUUC-Mdo-062438	Monodelphis domestica	97.86	5.00e-121	426.00
IUUC-Mmu-064046	Mus musculus	98.72	1.00e-121	428.00
IUUC-Mpu-066029	Mustela putorius furo	94.51	2.00e-123	434.00
IUUC-Mlu-067741	Myotis lucifugus	98.72	4.00e-121	427.00
IUUC-Ont-071248	Oreochromis niloticus	94.44	2.00e-126	444.00
IUUC-Oan-073432	Ornithorhynchus anatinus	97.42	4.00e-120	423.00
IUUC-Olo-080270	Oryza longistaminata	35.11	1.00e-12	67.40
IUUC-Ola-086486	Oryzias latipes	85.77	3.00e-113	401.00
IUUC-Oga-088293	Otolemur garnettii	99.57	1.00e-121	428.00
IUUC-Ptr-090720	Pan troglodytes	99.15	2.00e-121	428.00
IUUC-Pan-091732	Papio anubis	99.15	2.00e-121	428.00
IUUC-Psi-093627	Pelodiscus sinensis	96.15	3.00e-113	400.00
IUUC-Pma-094679	Petromyzon marinus	77.02	1.00e-108	385.00
IUUC-Pfo-097105	Poecilia formosa	93.16	8.00e-126	442.00
IUUC-Pab-098054	Pongo abelii	99.15	2.00e-121	428.00
IUUC-Pca-100775	Procavia capensis	96.89	4.00e-88	316.00
IUUC-Pva-102658	Pteropus vampyrus	98.29	2.00e-120	424.00
IUUC-Rno-105303	Rattus norvegicus	98.72	1.00e-121	428.00
IUUC-Sha-106536	Sarcophilus harrisii	97.86	5.00e-121	426.00
IUUC-Tgu-116858	Taeniopygia guttata	99.32	4.00e-85	306.00
IUUC-Tru-118264	Takifugu rubripes	93.59	3.00e-125	441.00
IUUC-Tni-120350	Tetraodon nigroviridis	93.16	4.00e-125	440.00
IUUC-Ttr-129236	Tursiops truncatus	98.72	4.00e-123	433.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence