iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086486

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04057104

Gene Name

RAB40C (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000013043.1	ENSORLT00000016345.1	ENSORLP00000016344.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	6.70e-16	58.2	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC+++I++c++ + +   dkLPLP  +k++L+++++
   Q: 180  MEKFW-RPNRVFSLQDLCCRSIVSCTPVHLI---DKLPLPHTIKSHLKSFSM 227
           67899.**********************888...***************976 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MGAQSSPVKS YDYLLKFLLV GDSDVGKGEI LDSVQDGSAE SPYAYSSGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNSW SFDGIDRWIR EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAACCCGG GCCTCGACCC CTCGACCGAT CCGGTATTTC TAAAGTGTTG TGCATGGTTA 60
TTCTGGCAAT TTTTACACCG GATGCCCTTC CTGACGCAAC CCTCTCTATT TATCCGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	87.18	1.00e-135	475.00
IUUC-Apl-003799	Anas platyrhynchos	82.80	1.00e-122	431.00
IUUC-Aca-005004	Anolis carolinensis	76.36	3.00e-127	447.00
IUUC-Ame-011203	Astyanax mexicanus	88.81	7.00e-153	532.00
IUUC-Bta-013490	Bos taurus	86.71	2.00e-139	487.00
IUUC-Cja-019990	Callithrix jacchus	86.76	5.00e-138	483.00
IUUC-Cfa-020527	Canis familiaris	72.94	2.00e-97	348.00
IUUC-Cpo-022437	Cavia porcellus	87.32	6.00e-135	473.00
IUUC-Csa-024147	Chlorocebus sabaeus	86.71	2.00e-139	488.00
IUUC-Cho-024716	Choloepus hoffmanni	69.77	6.00e-70	255.00
IUUC-Dre-027427	Danio rerio	89.16	3.00e-153	533.00
IUUC-Dno-029998	Dasypus novemcinctus	85.83	1.00e-109	391.00
IUUC-Dor-030584	Dipodomys ordii	77.31	2.00e-100	357.00
IUUC-Dme-031810	Drosophila melanogaster	64.75	3.00e-94	337.00
IUUC-Ete-033080	Echinops telfairi	92.83	4.00e-135	473.00
IUUC-Eca-033423	Equus caballus	86.25	9.00e-118	415.00
IUUC-Eeu-034590	Erinaceus europaeus	81.51	7.00e-105	372.00
IUUC-Fca-035697	Felis catus	86.19	8.00e-114	402.00
IUUC-Fal-037070	Ficedula albicollis	85.66	7.00e-139	486.00
IUUC-Gmo-039605	Gadus morhua	87.76	7.00e-151	526.00
IUUC-Gga-040343	Gallus gallus	85.66	7.00e-139	486.00
IUUC-Gac-041833	Gasterosteus aculeatus	91.67	1.00e-150	525.00
IUUC-Ggo-045131	Gorilla gorilla	79.37	8.00e-122	429.00
IUUC-Hsa-046237	Homo sapiens	86.71	2.00e-139	488.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	86.36	2.00e-139	487.00
IUUC-Lch-050193	Latimeria chalumnae	87.41	1.00e-150	525.00
IUUC-Loc-052243	Lepisosteus oculatus	89.16	3.00e-153	533.00
IUUC-Laf-054435	Loxodonta africana	84.97	2.00e-138	484.00
IUUC-Mcc-055337	Macaca mulatta	86.36	2.00e-138	484.00
IUUC-Meu-056731	Macropus eugenii	81.40	1.00e-71	262.00
IUUC-Mga-059204	Meleagris gallopavo	76.57	1.00e-133	468.00
IUUC-Mmr-061380	Microcebus murinus	86.27	3.00e-138	484.00
IUUC-Mdo-062438	Monodelphis domestica	85.31	2.00e-138	484.00
IUUC-Mmu-064046	Mus musculus	86.71	2.00e-139	487.00
IUUC-Mpu-066029	Mustela putorius furo	83.54	2.00e-116	411.00
IUUC-Mlu-067741	Myotis lucifugus	86.71	5.00e-139	486.00
IUUC-Nle-070096	Nomascus leucogenys	75.52	7.00e-132	462.00
IUUC-Opr-070662	Ochotona princeps	72.03	1.00e-124	438.00
IUUC-Ont-071248	Oreochromis niloticus	89.16	6.00e-153	532.00
IUUC-Oan-073432	Ornithorhynchus anatinus	85.00	3.00e-113	400.00
IUUC-Ocu-074559	Oryctolagus cuniculus	72.38	1.00e-122	432.00
IUUC-Olo-080270	Oryza longistaminata	34.41	3.00e-12	65.90
IUUC-Oga-088293	Otolemur garnettii	86.36	2.00e-139	487.00
IUUC-Oar-089702	Ovis aries	71.85	8.00e-105	372.00
IUUC-Ptr-090720	Pan troglodytes	86.71	2.00e-139	488.00
IUUC-Pan-091732	Papio anubis	86.71	2.00e-139	488.00
IUUC-Psi-093627	Pelodiscus sinensis	92.41	1.00e-134	471.00
IUUC-Pma-094401	Petromyzon marinus	73.44	2.00e-107	381.00
IUUC-Pfo-096187	Poecilia formosa	89.49	5.00e-155	539.00
IUUC-Pab-098054	Pongo abelii	86.71	2.00e-139	488.00
IUUC-Pca-100775	Procavia capensis	93.29	4.00e-84	303.00
IUUC-Pva-102658	Pteropus vampyrus	86.36	2.00e-138	484.00
IUUC-Rno-105303	Rattus norvegicus	86.71	2.00e-139	487.00
IUUC-Sha-106536	Sarcophilus harrisii	85.31	2.00e-138	484.00
IUUC-Sar-113518	Sorex araneus	72.24	2.00e-109	387.00
IUUC-Ssc-115719	Sus scrofa	73.09	8.00e-126	442.00
IUUC-Tgu-116858	Taeniopygia guttata	92.23	2.00e-108	384.00
IUUC-Tru-117605	Takifugu rubripes	88.80	4.00e-135	473.00
IUUC-Tsy-119011	Tarsius syrichta	72.22	1.00e-86	311.00
IUUC-Tni-120559	Tetraodon nigroviridis	94.01	2.00e-140	491.00
IUUC-Tbe-127818	Tupaia belangeri	27.12	4.00e-10	58.20
IUUC-Ttr-129236	Tursiops truncatus	87.76	7.00e-141	492.00
IUUC-Xtr-132079	Xenopus tropicalis	76.92	5.00e-134	469.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence