iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114560

UUCD1 version

UUC-SoB-01331

Ensembl Protein ID

Sb09g030800.1

UniProt Accession

C5YX28; C5YX28_SORBI

Genbank Protein ID

EES18812.1; KXG22717.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768; CM000768

Gene Name

SORBI_009G258500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g030800	Sb09g030800.1	Sb09g030800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-62	203.3	154	191
UBD/Beta-Prp	2.70e-76	257.4	106	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v c+a+ +d + lvsGs  g + +WD++tg++l
   Q: 154  GHKNWVLCIAWsPDgKQLVSGSKSGELILWDPKTGNQL 191
           8***********999********************987 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           + +++ gh+++v av+fspdgk l++gs D +++ wdlst +++ t kgh++ vl++++sp+g+ lvsGs+   + +wd +tg  l ++l gh+++
   Q: 106  CSATIAGHTEAVIAVSFSPDGKSLASGSGDTNVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGKQLVSGSKSGELILWDPKTGNQLGTPLMGHRKW 201
           57899******************************************************************************************* PP
   S: 140  vncvvvhp...dg..nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           ++ v++ p   ++  + +vs+s+D+  r+Wd+ t k++  ltg ht+sv+++++  +g  + +gs+d  +k+w+ ++g+ v+tl+gh  +v+s+++
   Q: 202  ITAVSWEPvhlQSpcRRFVSASKDGDARIWDVTTRKCIISLTG-HTSSVTCVKWGGDG-LIYTGSQDCLIKVWETSQGKLVKTLKGHGHWVNSLAL 295
           ***99876222222389*************************9.************98.9************************************ PP
   S: 231  spnderlv.sgssD 243
           s  +e+++ +g+ D
   Q: 296  S--TEYVLrTGAYD 307
           *..55544044455 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDTQPVLAPA IDASASVMCQ LLSPEGDPLG AALYLPQNVG TPQLQEIVNQ LLHNEEKLPY 60
AFYVGDEELS VQLGAYMRQK NANVEVTLRI VCQPQALFRI RPVNRCSATI AGHTEAVIAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGGGTTCA TCAGCACAAG CTGCTTGCTT GTCTGGTGGT CTCAGGCGCC GCCGCCGCCG 60
CCGTCCTCCT CCTCTACTGG TACTGCAGGA TATCCATGCT CTCTCACTTG CATCGGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0009553--P:embryo sac development
GO:0000027--P:ribosomal large subunit assembly

KEGG

sbi:SORBI_09g030800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	90.04	0.00e+00	880.00
IUUC-Aml-001793	Ailuropoda melanoleuca	58.67	2.00e-169	588.00
IUUC-Atr-002507	Amborella trichopoda	76.01	0.00e+00	780.00
IUUC-Apl-003964	Anas platyrhynchos	59.47	3.00e-164	570.00
IUUC-Aly-006396	Arabidopsis lyrata	73.39	0.00e+00	738.00
IUUC-Ath-007278	Arabidopsis thaliana	73.82	0.00e+00	739.00
IUUC-Ago-007951	Ashbya gossypii	48.74	9.00e-136	476.00
IUUC-Acl-008298	Aspergillus clavatus	48.56	6.00e-125	440.00
IUUC-Afl-008581	Aspergillus flavus	56.34	3.00e-117	414.00
IUUC-Afu-008906	Aspergillus fumigatus	47.42	2.00e-122	432.00
IUUC-Ani-009189	Aspergillus nidulans	47.34	9.00e-123	432.00
IUUC-Ang-009630	Aspergillus niger	51.32	2.00e-132	464.00
IUUC-Aor-010038	Aspergillus oryzae	49.28	1.00e-134	472.00
IUUC-Ate-010278	Aspergillus terreus	52.12	6.00e-127	446.00
IUUC-Ame-011890	Astyanax mexicanus	58.03	1.00e-164	571.00
IUUC-Bgr-012011	Blumeria graminis	54.50	2.00e-132	464.00
IUUC-Bta-012964	Bos taurus	58.24	7.00e-170	589.00
IUUC-Bci-013592	Botrytis cinerea	51.74	4.00e-123	434.00
IUUC-Bdi-015035	Brachypodium distachyon	90.11	0.00e+00	885.00
IUUC-Bol-015501	Brassica oleracea	73.81	0.00e+00	734.00
IUUC-Bra-017642	Brassica rapa	74.03	0.00e+00	738.00
IUUC-Cel-018430	Caenorhabditis elegans	50.98	4.00e-143	500.00
IUUC-Cja-019125	Callithrix jacchus	58.03	2.00e-168	584.00
IUUC-Cfa-021013	Canis familiaris	59.18	2.00e-164	571.00
IUUC-Cpo-021743	Cavia porcellus	58.46	8.00e-171	592.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	50.54	3.00e-136	477.00
IUUC-Csa-024270	Chlorocebus sabaeus	58.24	8.00e-169	585.00
IUUC-Cin-025795	Ciona intestinalis	55.98	2.00e-164	570.00
IUUC-Csv-025953	Ciona savignyi	55.77	2.00e-162	564.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	52.53	3.00e-109	387.00
IUUC-Cne-026901	Cryptococcus neoformans	48.61	4.00e-139	487.00
IUUC-Cme-027281	Cyanidioschyzon merolae	48.44	8.00e-115	406.00
IUUC-Dre-028515	Danio rerio	58.24	2.00e-162	564.00
IUUC-Dno-029596	Dasypus novemcinctus	58.02	2.00e-169	588.00
IUUC-Dor-030494	Dipodomys ordii	57.82	1.00e-166	578.00
IUUC-Dse-031538	Dothistroma septosporum	50.00	3.00e-129	454.00
IUUC-Dme-031974	Drosophila melanogaster	53.10	3.00e-152	530.00
IUUC-Ete-032948	Echinops telfairi	64.73	9.00e-80	290.00
IUUC-Eca-033399	Equus caballus	58.24	8.00e-169	585.00
IUUC-Eeu-035013	Erinaceus europaeus	64.25	1.00e-78	286.00
IUUC-Fca-035860	Felis catus	57.82	5.00e-169	586.00
IUUC-Fal-037069	Ficedula albicollis	62.75	4.00e-93	333.00
IUUC-Fox-038059	Fusarium oxysporum	46.34	5.00e-125	440.00
IUUC-Fso-038445	Fusarium solani	45.93	1.00e-123	435.00
IUUC-Gmo-039319	Gadus morhua	57.54	4.00e-154	536.00
IUUC-Ggr-040095	Gaeumannomyces graminis	45.89	2.00e-120	425.00
IUUC-Gga-040303	Gallus gallus	62.75	2.00e-92	331.00
IUUC-Gac-042267	Gasterosteus aculeatus	58.24	2.00e-160	557.00
IUUC-Gma-043974	Glycine max	77.97	0.00e+00	786.00
IUUC-Ggo-044637	Gorilla gorilla	58.03	1.00e-167	582.00
IUUC-Hsa-046128	Homo sapiens	58.24	2.00e-169	587.00
IUUC-Hvu-047373	Hordeum vulgare	88.65	0.00e+00	874.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	56.79	9.00e-170	588.00
IUUC-Kpa-049274	Komagataella pastoris	46.54	3.00e-130	457.00
IUUC-Lch-049907	Latimeria chalumnae	54.41	3.00e-153	534.00
IUUC-Lpe-050778	Leersia perrieri	86.30	0.00e+00	833.00
IUUC-Loc-051889	Lepisosteus oculatus	56.75	9.00e-163	565.00
IUUC-Lma-053041	Leptosphaeria maculans	51.53	7.00e-124	436.00
IUUC-Laf-053598	Loxodonta africana	58.46	1.00e-169	588.00
IUUC-Mcc-055660	Macaca mulatta	58.24	7.00e-169	585.00
IUUC-Meu-056197	Macropus eugenii	51.83	2.00e-142	497.00
IUUC-Mor-056949	Magnaporthe oryzae	46.93	9.00e-121	426.00
IUUC-Mpo-057571	Magnaporthe poae	53.49	8.00e-62	230.00
IUUC-Mtr-058530	Medicago truncatula	77.97	0.00e+00	749.00
IUUC-Mla-059133	Melampsora laricipopulina	53.13	9.00e-126	442.00
IUUC-Mga-059252	Meleagris gallopavo	62.81	8.00e-139	485.00
IUUC-Mvi-060522	Microbotryum violaceum	47.11	3.00e-134	471.00
IUUC-Mmr-061117	Microcebus murinus	58.12	2.00e-168	584.00
IUUC-Mdo-062892	Monodelphis domestica	57.82	2.00e-166	578.00
IUUC-Mmu-064108	Mus musculus	58.46	3.00e-164	570.00
IUUC-Mac-064430	Musa acuminata	81.45	0.00e+00	826.00
IUUC-Mpu-065882	Mustela putorius furo	58.03	3.00e-168	583.00
IUUC-Mlu-068123	Myotis lucifugus	58.24	3.00e-169	587.00
IUUC-Nfi-068484	Neosartorya fischeri	47.63	2.00e-123	434.00
IUUC-Ncr-068649	Neurospora crassa	45.07	4.00e-118	417.00
IUUC-Nle-069140	Nomascus leucogenys	58.03	1.00e-168	585.00
IUUC-Opr-070220	Ochotona princeps	55.15	5.00e-145	506.00
IUUC-Ont-072643	Oreochromis niloticus	59.62	7.00e-167	579.00
IUUC-Ocu-074007	Oryctolagus cuniculus	59.31	2.00e-166	578.00
IUUC-Oba-075904	Oryza barthii	93.09	0.00e+00	909.00
IUUC-Obr-076618	Oryza brachyantha	92.90	0.00e+00	906.00
IUUC-Ogl-077425	Oryza glaberrima	93.09	0.00e+00	908.00
IUUC-Ogu-078586	Oryza glumaepatula	92.51	0.00e+00	910.00
IUUC-Oin-079489	Oryza indica	90.71	0.00e+00	878.00
IUUC-Olo-080766	Oryza longistaminata	92.86	0.00e+00	908.00
IUUC-Ome-081905	Oryza meridionalis	93.30	0.00e+00	910.00
IUUC-Oni-083022	Oryza nivara	92.87	0.00e+00	908.00
IUUC-Opu-083615	Oryza punctata	93.30	0.00e+00	910.00
IUUC-Oru-085076	Oryza rufipogon	92.87	0.00e+00	908.00
IUUC-Osa-085516	Oryza sativa	92.87	0.00e+00	908.00
IUUC-Ola-087290	Oryzias latipes	58.12	7.00e-164	569.00
IUUC-Olu-087898	Ostreococcus lucimarinus	57.17	3.00e-163	567.00
IUUC-Oga-088980	Otolemur garnettii	58.03	4.00e-169	587.00
IUUC-Oar-089580	Ovis aries	56.05	3.00e-139	487.00
IUUC-Ptr-090845	Pan troglodytes	57.39	6.00e-166	576.00
IUUC-Pan-092836	Papio anubis	58.24	2.00e-169	587.00
IUUC-Pno-095052	Phaeosphaeria nodorum	49.56	1.00e-126	446.00
IUUC-Ppa-095432	Physcomitrella patens	70.77	0.00e+00	731.00
IUUC-Pfo-096963	Poecilia formosa	52.56	2.00e-139	488.00
IUUC-Pab-097716	Pongo abelii	55.46	3.00e-157	547.00
IUUC-Pop-099224	Populus trichocarpa	79.23	0.00e+00	795.00
IUUC-Pca-100682	Procavia capensis	61.13	2.00e-132	464.00
IUUC-Ppe-101819	Prunus persica	78.62	0.00e+00	778.00
IUUC-Pva-102338	Pteropus vampyrus	53.54	8.00e-115	405.00
IUUC-Pgr-103583	Puccinia graminis	54.98	1.00e-131	462.00
IUUC-Ptt-103737	Puccinia triticina	38.24	7.00e-95	340.00
IUUC-Pte-104150	Pyrenophora teres	50.11	4.00e-124	437.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	50.11	1.00e-124	439.00
IUUC-Rno-105987	Rattus norvegicus	58.46	1.00e-169	588.00
IUUC-Sce-106315	Saccharomyces cerevisiae	50.84	4.00e-139	487.00
IUUC-Sha-107273	Sarcophilus harrisii	58.03	2.00e-168	584.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	45.99	1.00e-119	422.00
IUUC-Spo-108092	Schizosaccharomyces pombe	47.45	3.00e-121	427.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	45.57	3.00e-120	424.00
IUUC-Smo-108855	Selaginella moellendorffii	67.36	0.00e+00	692.00
IUUC-Sit-110329	Setaria italica	92.95	0.00e+00	919.00
IUUC-Sly-111830	Solanum lycopersicum	79.70	0.00e+00	795.00
IUUC-Stu-112603	Solanum tuberosum	79.70	0.00e+00	794.00
IUUC-Sar-113504	Sorex araneus	45.21	2.00e-34	139.00
IUUC-Sre-115133	Sporisorium reilianum	41.52	3.00e-124	437.00
IUUC-Ssc-115903	Sus scrofa	58.24	1.00e-168	585.00
IUUC-Tgu-116798	Taeniopygia guttata	57.39	3.00e-165	573.00
IUUC-Tru-118361	Takifugu rubripes	58.12	2.00e-166	578.00
IUUC-Tsy-118849	Tarsius syrichta	58.06	2.00e-167	581.00
IUUC-Tni-120094	Tetraodon nigroviridis	58.55	9.00e-168	582.00
IUUC-Tca-121634	Theobroma cacao	78.21	0.00e+00	777.00
IUUC-Tre-122051	Trichoderma reesei	45.44	3.00e-119	421.00
IUUC-Tvi-122322	Trichoderma virens	46.56	6.00e-123	433.00
IUUC-Tae-123133	Triticum aestivum	90.15	0.00e+00	889.00
IUUC-Tur-126766	Triticum urartu	80.00	0.00e+00	855.00
IUUC-Tme-127175	Tuber melanosporum	51.17	3.00e-132	464.00
IUUC-Tbe-127779	Tupaia belangeri	60.66	6.00e-159	552.00
IUUC-Ttr-128224	Tursiops truncatus	59.21	2.00e-156	544.00
IUUC-Uma-129537	Ustilago maydis	40.34	1.00e-123	436.00
IUUC-Vda-129927	Verticillium dahliae	44.62	2.00e-110	391.00
IUUC-Vpa-130658	Vicugna pacos	54.47	1.00e-84	306.00
IUUC-Vvi-131659	Vitis vinifera	77.94	0.00e+00	788.00
IUUC-Xtr-132918	Xenopus tropicalis	53.63	5.00e-155	540.00
IUUC-Xma-133700	Xiphophorus maculatus	58.55	1.00e-164	572.00
IUUC-Yli-134478	Yarrowia lipolytica	49.79	3.00e-137	480.00
IUUC-Zma-135835	Zea mays	93.13	0.00e+00	942.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence