iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tme-127043

Ensembl Protein ID

CAZ81011

UniProt Accession

D5G918; D5G918_TUBMM

Genbank Protein ID

CAZ81011.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

FN430053

Gene Name

GSTUM_00004946001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSTUM_00004946001	CAZ81011	CAZ81011

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	38.87	2.00e-46	184.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Tuber melanosporum

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MADKDSYIHL ARPLPVVSVP PAQATTSPLS VVISAQALFS ILDHSLRRNT DQERVIGTLL 60
GVRNEDGAEV EIRNCFAVGH NESQEQVEVD MDYHKTMLGL HLKANPKEVL IGWYATSPEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACA AAGATTCTTA CATCCATCTT GCTCGACCGC TTCCTGTCGT TAGCGTTCCG 60
CCAGCTCAGG CCACCACCTC GCCGTTAAGT GTTGTTATTA GTGCCCAGGC TCTCTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

tml:GSTUM_00004946001

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	33.56	1.00e-36	144.00
IUUC-Aml-001527	Ailuropoda melanoleuca	38.58	2.00e-48	184.00
IUUC-Atr-002686	Amborella trichopoda	38.43	3.00e-37	146.00
IUUC-Apl-003977	Anas platyrhynchos	35.65	1.00e-40	157.00
IUUC-Aca-004335	Anolis carolinensis	37.36	2.00e-48	184.00
IUUC-Aly-005945	Arabidopsis lyrata	37.31	1.00e-38	151.00
IUUC-Ath-007045	Arabidopsis thaliana	36.19	6.00e-38	149.00
IUUC-Acl-008365	Aspergillus clavatus	69.28	1.00e-126	443.00
IUUC-Afl-008742	Aspergillus flavus	68.30	3.00e-120	422.00
IUUC-Afu-009030	Aspergillus fumigatus	68.95	2.00e-126	443.00
IUUC-Ani-009212	Aspergillus nidulans	67.75	2.00e-124	436.00
IUUC-Ang-009712	Aspergillus niger	68.30	2.00e-124	437.00
IUUC-Aor-009885	Aspergillus oryzae	68.30	2.00e-125	439.00
IUUC-Ate-010315	Aspergillus terreus	68.30	7.00e-119	418.00
IUUC-Ame-010801	Astyanax mexicanus	29.86	3.00e-25	106.00
IUUC-Bgr-011982	Blumeria graminis	59.16	8.00e-109	384.00
IUUC-Bta-012804	Bos taurus	38.58	2.00e-48	184.00
IUUC-Bci-013891	Botrytis cinerea	62.50	9.00e-108	381.00
IUUC-Bdi-014328	Brachypodium distachyon	33.69	4.00e-36	142.00
IUUC-Bol-015446	Brassica oleracea	37.32	9.00e-41	158.00
IUUC-Bra-016862	Brassica rapa	37.32	1.00e-40	157.00
IUUC-Cel-018171	Caenorhabditis elegans	27.70	7.00e-29	119.00
IUUC-Cja-019335	Callithrix jacchus	38.58	2.00e-48	184.00
IUUC-Cfa-020138	Canis familiaris	38.58	2.00e-48	184.00
IUUC-Cpo-022109	Cavia porcellus	37.59	6.00e-42	162.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	36.84	9.00e-49	184.00
IUUC-Csa-023994	Chlorocebus sabaeus	38.58	3.00e-48	183.00
IUUC-Cho-024351	Choloepus hoffmanni	28.84	2.00e-23	100.00
IUUC-Cin-025801	Ciona intestinalis	35.79	2.00e-45	174.00
IUUC-Csv-025805	Ciona savignyi	35.53	4.00e-43	166.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	55.02	6.00e-98	348.00
IUUC-Cne-026868	Cryptococcus neoformans	34.46	5.00e-39	152.00
IUUC-Cme-027328	Cyanidioschyzon merolae	25.77	2.00e-16	77.40
IUUC-Dre-028085	Danio rerio	39.71	2.00e-50	190.00
IUUC-Dno-030099	Dasypus novemcinctus	38.58	4.00e-48	183.00
IUUC-Dor-030324	Dipodomys ordii	34.08	4.00e-37	146.00
IUUC-Dse-031314	Dothistroma septosporum	66.67	1.00e-120	423.00
IUUC-Dme-031926	Drosophila melanogaster	30.94	4.00e-37	146.00
IUUC-Ete-032569	Echinops telfairi	36.70	1.00e-43	167.00
IUUC-Eca-033502	Equus caballus	35.96	4.00e-44	169.00
IUUC-Eeu-034883	Erinaceus europaeus	27.23	2.00e-15	73.20
IUUC-Fca-035873	Felis catus	38.58	3.00e-48	183.00
IUUC-Fal-036921	Ficedula albicollis	38.20	2.00e-49	186.00
IUUC-Fox-037765	Fusarium oxysporum	56.17	3.00e-95	339.00
IUUC-Fso-038240	Fusarium solani	56.49	2.00e-96	343.00
IUUC-Gmo-038864	Gadus morhua	37.36	5.00e-47	179.00
IUUC-Ggr-039862	Gaeumannomyces graminis	55.19	6.00e-92	328.00
IUUC-Gga-040952	Gallus gallus	38.20	3.00e-49	186.00
IUUC-Gac-041677	Gasterosteus aculeatus	37.87	1.00e-47	181.00
IUUC-Gma-043061	Glycine max	34.66	3.00e-33	133.00
IUUC-Ggo-045591	Gorilla gorilla	38.58	2.00e-48	184.00
IUUC-Hsa-046860	Homo sapiens	38.58	3.00e-48	183.00
IUUC-Hvu-047410	Hordeum vulgare	32.43	2.00e-20	89.40
IUUC-Itr-048211	Ictidomys tridecemlineatus	38.58	3.00e-48	183.00
IUUC-Lch-049410	Latimeria chalumnae	35.38	1.00e-25	107.00
IUUC-Lpe-051102	Leersia perrieri	35.21	1.00e-37	147.00
IUUC-Loc-052016	Lepisosteus oculatus	34.91	4.00e-36	142.00
IUUC-Lma-053157	Leptosphaeria maculans	68.30	2.00e-125	440.00
IUUC-Laf-054568	Loxodonta africana	38.58	5.00e-48	182.00
IUUC-Mcc-054613	Macaca mulatta	38.58	2.00e-48	184.00
IUUC-Meu-056832	Macropus eugenii	34.38	4.00e-20	89.40
IUUC-Mor-057104	Magnaporthe oryzae	54.55	1.00e-95	341.00
IUUC-Mtr-058445	Medicago truncatula	35.07	2.00e-43	167.00
IUUC-Mla-059038	Melampsora laricipopulina	39.47	2.00e-52	197.00
IUUC-Mga-059548	Meleagris gallopavo	36.40	6.00e-44	168.00
IUUC-Mvi-060520	Microbotryum violaceum	36.33	3.00e-40	157.00
IUUC-Mdo-062376	Monodelphis domestica	37.83	1.00e-48	184.00
IUUC-Mmu-063254	Mus musculus	38.58	3.00e-48	183.00
IUUC-Mac-065635	Musa acuminata	35.86	2.00e-39	153.00
IUUC-Mpu-066314	Mustela putorius furo	38.58	2.00e-48	184.00
IUUC-Mlu-067512	Myotis lucifugus	37.45	6.00e-48	182.00
IUUC-Nfi-068262	Neosartorya fischeri	68.95	2.00e-126	443.00
IUUC-Ncr-068872	Neurospora crassa	55.05	7.00e-89	318.00
IUUC-Nle-070118	Nomascus leucogenys	38.58	2.00e-48	184.00
IUUC-Opr-071228	Ochotona princeps	36.82	3.00e-43	166.00
IUUC-Ont-072600	Oreochromis niloticus	37.50	2.00e-48	183.00
IUUC-Oan-073584	Ornithorhynchus anatinus	36.82	4.00e-44	169.00
IUUC-Ocu-074542	Oryctolagus cuniculus	38.58	1.00e-48	184.00
IUUC-Oba-075923	Oryza barthii	34.71	1.00e-39	154.00
IUUC-Obr-076313	Oryza brachyantha	35.58	1.00e-39	154.00
IUUC-Ogl-076932	Oryza glaberrima	34.71	1.00e-39	154.00
IUUC-Ogu-078152	Oryza glumaepatula	34.71	1.00e-39	154.00
IUUC-Oin-079528	Oryza indica	34.71	1.00e-39	154.00
IUUC-Olo-080401	Oryza longistaminata	34.71	1.00e-39	154.00
IUUC-Ome-081553	Oryza meridionalis	34.71	7.00e-40	155.00
IUUC-Oni-082090	Oryza nivara	34.71	4.00e-40	156.00
IUUC-Opu-083583	Oryza punctata	35.21	3.00e-38	150.00
IUUC-Oru-084492	Oryza rufipogon	34.71	1.00e-39	154.00
IUUC-Osa-085383	Oryza sativa	34.71	1.00e-39	154.00
IUUC-Ola-086835	Oryzias latipes	34.55	2.00e-47	180.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.67	1.00e-23	100.00
IUUC-Oga-088886	Otolemur garnettii	38.58	9.00e-49	185.00
IUUC-Oar-090079	Ovis aries	38.58	2.00e-48	184.00
IUUC-Ptr-091457	Pan troglodytes	38.58	3.00e-48	183.00
IUUC-Pan-092317	Papio anubis	33.51	9.00e-26	107.00
IUUC-Psi-093129	Pelodiscus sinensis	35.98	9.00e-43	165.00
IUUC-Pma-094488	Petromyzon marinus	35.42	1.00e-51	194.00
IUUC-Pno-095049	Phaeosphaeria nodorum	68.95	3.00e-127	445.00
IUUC-Ppa-095341	Physcomitrella patens	37.45	2.00e-49	187.00
IUUC-Pfo-096286	Poecilia formosa	35.37	3.00e-47	179.00
IUUC-Pab-097765	Pongo abelii	38.58	3.00e-48	183.00
IUUC-Pop-099131	Populus trichocarpa	36.97	2.00e-43	166.00
IUUC-Pca-100524	Procavia capensis	29.05	1.00e-25	107.00
IUUC-Ppe-101934	Prunus persica	36.57	4.00e-44	169.00
IUUC-Pva-102577	Pteropus vampyrus	38.20	4.00e-48	183.00
IUUC-Pgr-103521	Puccinia graminis	36.02	3.00e-49	186.00
IUUC-Pte-104304	Pyrenophora teres	68.95	4.00e-126	442.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	69.28	8.00e-127	444.00
IUUC-Rno-105717	Rattus norvegicus	38.58	3.00e-48	183.00
IUUC-Sha-107190	Sarcophilus harrisii	37.83	7.00e-49	185.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	52.82	1.00e-91	327.00
IUUC-Spo-108355	Schizosaccharomyces pombe	52.00	2.00e-92	330.00
IUUC-Smo-109374	Selaginella moellendorffii	39.72	3.00e-54	202.00
IUUC-Sit-110119	Setaria italica	34.43	1.00e-38	151.00
IUUC-Sly-111570	Solanum lycopersicum	34.26	5.00e-33	132.00
IUUC-Stu-112308	Solanum tuberosum	34.65	2.00e-39	153.00
IUUC-Sar-113515	Sorex araneus	33.68	3.00e-07	46.20
IUUC-Sbi-114605	Sorghum bicolor	35.16	3.00e-39	153.00
IUUC-Sre-114906	Sporisorium reilianum	49.63	5.00e-68	249.00
IUUC-Tgu-117087	Taeniopygia guttata	36.60	6.00e-43	165.00
IUUC-Tru-117700	Takifugu rubripes	37.13	2.00e-48	183.00
IUUC-Tni-120470	Tetraodon nigroviridis	36.40	8.00e-48	181.00
IUUC-Tca-121109	Theobroma cacao	37.01	5.00e-36	142.00
IUUC-Tre-122095	Trichoderma reesei	54.05	4.00e-93	332.00
IUUC-Tvi-122580	Trichoderma virens	54.05	5.00e-93	332.00
IUUC-Tae-125129	Triticum aestivum	36.26	1.00e-40	157.00
IUUC-Tur-126658	Triticum urartu	32.27	2.00e-33	133.00
IUUC-Tbe-127927	Tupaia belangeri	38.58	3.00e-48	183.00
IUUC-Ttr-129231	Tursiops truncatus	38.58	2.00e-48	184.00
IUUC-Uma-129578	Ustilago maydis	48.90	1.00e-66	244.00
IUUC-Vda-129730	Verticillium dahliae	53.75	2.00e-97	347.00
IUUC-Vvi-130968	Vitis vinifera	35.59	2.00e-40	157.00
IUUC-Xtr-132203	Xenopus tropicalis	38.87	6.00e-49	185.00
IUUC-Xma-133972	Xiphophorus maculatus	37.13	1.00e-47	181.00
IUUC-Yli-134553	Yarrowia lipolytica	50.53	2.00e-77	280.00
IUUC-Zma-134941	Zea mays	34.07	6.00e-35	139.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence