iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067238

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02031269

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000012176.2	ENSMLUT00000012181.2	ENSMLUP00000011097.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-35	118.9	286	319
UBD/Beta-Prp	2.50e-50	171.4	75	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH++sv++++f  d  +lvsG+ D+t+ +WD+ +
   Q: 286  GHEGSVSSCQFaRDtSFLVSGGFDKTVAIWDVGE 319
           8***********77699**************865 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           ++++l+gh++ v s++f+ ++ kl+sGs d t+++wd   g+ ++++++g ++ v   +v  d++ + ++++D+t+r Wdl+tgkll +
   Q: 75   TFQILTGHQQLVSSCHFCVNDTKLLSGSFDYTVKLWDAMDGSIIRDFDDGPKAPVLECSVTADSRRITAAAYDKTLRTWDLETGKLLWK 163
           68999**********************************************************************************99 PP
   S: 175  ltgghtdsvyslsfdsngkelvsg.sldgtvklwdlqtgec.vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
            +  h++ ++s +f+++gk++vsg + d  + + d ++  +   +   h++ v+   f+p+++ ++s+s D+s++iWd++s+ +l t++
   Q: 164  IR--HEGFITSCNFSPDGKYVVSGlDVDHGICITDARNAMTvTPSADHHKRSVTGCCFDPDSQKVASVSLDKSVKIWDITSQATLLTIN 250
           96..9******************9677**********6655166777899*************************************** PP
   S: 262  lhnssvisvavlsfgdnvlvlgse 285
             +++ +s++++ f+ +++ +g++
   Q: 251  TAHDNAVSSCCFTFSIWNVHTGEF 274
           ***********9999888888876 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

PPLVPGAEGA LGRRRLPWMT LIRAVGRFQR LISEVRQSQT LSSLNPLAME LNVPQKHPIP 60
EKEFWGDQEP LSKITFQILT GHQQLVSSCH FCVNDTKLLS GSFDYTVKLW DAMDGSIIRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCCCCTGG TCCCAGGCGC AGAGGGCGCA CTGGGACGCA GAAGGCTGCC TTGGATGACC 60
TTGATCAGGG CTGTTGGCCG CTTCCAGAGG CTGATCTCGG AGGTTCGGCA GAGTCAAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	76.43	4.00e-142	497.00
IUUC-Apl-003571	Anas platyrhynchos	53.48	3.00e-112	398.00
IUUC-Aca-005232	Anolis carolinensis	45.28	4.00e-66	244.00
IUUC-Ame-011833	Astyanax mexicanus	43.52	9.00e-42	162.00
IUUC-Bta-013562	Bos taurus	69.08	1.00e-161	562.00
IUUC-Cja-019202	Callithrix jacchus	66.74	9.00e-169	586.00
IUUC-Cfa-021095	Canis familiaris	65.22	7.00e-166	577.00
IUUC-Cpo-022170	Cavia porcellus	66.51	4.00e-162	564.00
IUUC-Csa-024218	Chlorocebus sabaeus	69.40	3.00e-172	597.00
IUUC-Cho-024561	Choloepus hoffmanni	67.35	4.00e-110	390.00
IUUC-Dno-029722	Dasypus novemcinctus	68.47	2.00e-138	484.00
IUUC-Dor-030464	Dipodomys ordii	57.76	7.00e-112	396.00
IUUC-Ete-032931	Echinops telfairi	56.23	6.00e-98	350.00
IUUC-Eca-034428	Equus caballus	75.28	3.00e-160	557.00
IUUC-Eeu-034568	Erinaceus europaeus	52.07	3.00e-99	355.00
IUUC-Fca-035707	Felis catus	72.57	1.00e-176	612.00
IUUC-Gmo-039646	Gadus morhua	40.84	6.00e-63	234.00
IUUC-Gga-040710	Gallus gallus	52.29	8.00e-105	373.00
IUUC-Ggo-044611	Gorilla gorilla	46.63	2.00e-96	345.00
IUUC-Hsa-046138	Homo sapiens	67.13	3.00e-172	597.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	61.54	3.00e-149	521.00
IUUC-Lch-050329	Latimeria chalumnae	44.73	9.00e-92	330.00
IUUC-Loc-052876	Lepisosteus oculatus	41.94	5.00e-33	133.00
IUUC-Laf-053777	Loxodonta africana	71.05	3.00e-175	607.00
IUUC-Mcc-055771	Macaca mulatta	68.92	1.00e-171	595.00
IUUC-Meu-056584	Macropus eugenii	43.77	2.00e-72	265.00
IUUC-Mga-059818	Meleagris gallopavo	51.44	2.00e-111	395.00
IUUC-Mmr-060639	Microcebus murinus	68.71	1.00e-141	496.00
IUUC-Mdo-062321	Monodelphis domestica	53.49	1.00e-121	429.00
IUUC-Mpu-066849	Mustela putorius furo	69.56	7.00e-167	580.00
IUUC-Ont-071230	Oreochromis niloticus	38.32	5.00e-68	251.00
IUUC-Oan-072698	Ornithorhynchus anatinus	55.78	1.00e-126	446.00
IUUC-Ocu-074219	Oryctolagus cuniculus	68.36	1.00e-150	526.00
IUUC-Oga-087913	Otolemur garnettii	64.49	4.00e-159	554.00
IUUC-Oar-089977	Ovis aries	69.40	2.00e-162	565.00
IUUC-Ptr-090876	Pan troglodytes	67.60	8.00e-174	603.00
IUUC-Pan-091936	Papio anubis	72.93	2.00e-97	348.00
IUUC-Psi-093015	Pelodiscus sinensis	48.80	7.00e-68	249.00
IUUC-Pma-094552	Petromyzon marinus	35.03	7.00e-33	133.00
IUUC-Pfo-096240	Poecilia formosa	37.03	3.00e-62	234.00
IUUC-Pab-097983	Pongo abelii	60.37	5.00e-147	513.00
IUUC-Pca-100752	Procavia capensis	56.20	1.00e-125	443.00
IUUC-Pva-102199	Pteropus vampyrus	67.56	7.00e-166	576.00
IUUC-Rno-106062	Rattus norvegicus	61.84	1.00e-153	535.00
IUUC-Sar-113167	Sorex araneus	47.86	6.00e-34	137.00
IUUC-Ssc-116089	Sus scrofa	72.30	4.00e-174	603.00
IUUC-Tbe-127860	Tupaia belangeri	57.28	3.00e-139	488.00
IUUC-Ttr-129152	Tursiops truncatus	68.80	2.00e-160	558.00
IUUC-Vpa-130745	Vicugna pacos	63.12	2.00e-150	525.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence