iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000009196.7	ENSRNOT00000078718.1	ENSRNOP00000075040.1
ENSRNOG00000009196.7	ENSRNOT00000012354.6	ENSRNOP00000012354.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	95.63	0.00e+00	2219.00	IUUC-Hsa-046662

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPVQAAQWTE FLSCPICYNE FDENVHKPIS LGCSHTVCKT CLNKLHRKAC PFDQTAINTD 60
IDVLPVNFAL LQLVGAQVPD HQSIKLSNLG ENKHYEVAKK CVEDLALYLK PLSGGKGVAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGATTTTAAC AGTTAAGTGA ATGACTAATA ACTATATTGT TAAATCTTGC TTTTGTCCAT 60
TTGCAGCTTA AAAAACACTA CACAGCAAAA TAATGATCTG CTAGTCTGCT AACCCGAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032670--RC3H2
IPR027370--Znf-RING_LisH
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0009986--C:cell surface
GO:0016020--C:membrane
GO:0003677--F:DNA binding
GO:0003729--F:mRNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0001782--P:B cell homeostasis
GO:0060173--P:limb development
GO:0048286--P:lung alveolus development
GO:0048535--P:lymph node development
GO:0035264--P:multicellular organism growth
GO:1901224--P:positive regulation of NIK/NF-kappaB signaling
GO:0009791--P:post-embryonic development
GO:0010608--P:posttranscriptional regulation of gene expression
GO:0000209--P:protein polyubiquitination
GO:0048536--P:spleen development
GO:0043029--P:T cell homeostasis
GO:0042098--P:T cell proliferation
GO:0061470--P:T follicular helper cell differentiation

KEGG

rno:311909

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002394	Ailuropoda melanoleuca	95.80	0.00e+00	2207.00
IUUC-Apl-004222	Anas platyrhynchos	89.27	0.00e+00	2029.00
IUUC-Aca-004905	Anolis carolinensis	51.64	0.00e+00	919.00
IUUC-Ame-011475	Astyanax mexicanus	49.87	0.00e+00	840.00
IUUC-Bta-012366	Bos taurus	94.96	0.00e+00	2164.00
IUUC-Cel-018474	Caenorhabditis elegans	48.72	2.00e-08	55.50
IUUC-Cja-019462	Callithrix jacchus	95.72	0.00e+00	2165.00
IUUC-Cfa-020679	Canis familiaris	53.09	0.00e+00	919.00
IUUC-Cpo-021406	Cavia porcellus	95.88	0.00e+00	2188.00
IUUC-Csa-023857	Chlorocebus sabaeus	95.48	0.00e+00	1896.00
IUUC-Cho-024281	Choloepus hoffmanni	84.65	0.00e+00	696.00
IUUC-Dre-028035	Danio rerio	54.66	0.00e+00	1044.00
IUUC-Dno-029311	Dasypus novemcinctus	94.53	0.00e+00	2183.00
IUUC-Dor-030104	Dipodomys ordii	91.43	0.00e+00	1748.00
IUUC-Dme-031708	Drosophila melanogaster	65.38	4.00e-160	558.00
IUUC-Ete-032926	Echinops telfairi	85.60	0.00e+00	1387.00
IUUC-Eca-034318	Equus caballus	95.96	0.00e+00	2211.00
IUUC-Eeu-035091	Erinaceus europaeus	59.03	6.00e-171	594.00
IUUC-Fca-035557	Felis catus	95.63	0.00e+00	2202.00
IUUC-Fal-037375	Ficedula albicollis	90.11	0.00e+00	2061.00
IUUC-Gmo-039303	Gadus morhua	81.84	0.00e+00	751.00
IUUC-Gga-040314	Gallus gallus	89.27	0.00e+00	1992.00
IUUC-Ggo-045647	Gorilla gorilla	95.80	0.00e+00	2170.00
IUUC-Hsa-046662	Homo sapiens	95.63	0.00e+00	2165.00
IUUC-Itr-047974	Ictidomys tridecemlineatus	94.06	0.00e+00	1379.00
IUUC-Lch-050667	Latimeria chalumnae	50.48	0.00e+00	898.00
IUUC-Loc-052585	Lepisosteus oculatus	61.68	0.00e+00	1245.00
IUUC-Laf-054151	Loxodonta africana	94.37	0.00e+00	2165.00
IUUC-Mcc-055136	Macaca mulatta	95.97	0.00e+00	2172.00
IUUC-Meu-056747	Macropus eugenii	99.21	4.00e-143	502.00
IUUC-Mga-060133	Meleagris gallopavo	89.21	0.00e+00	1989.00
IUUC-Mmr-061559	Microcebus murinus	95.46	0.00e+00	2200.00
IUUC-Mdo-061870	Monodelphis domestica	92.42	0.00e+00	1991.00
IUUC-Mmu-063500	Mus musculus	98.48	0.00e+00	2282.00
IUUC-Mpu-066281	Mustela putorius furo	95.46	0.00e+00	2198.00
IUUC-Mlu-067576	Myotis lucifugus	93.61	0.00e+00	2204.00
IUUC-Nle-069921	Nomascus leucogenys	95.47	0.00e+00	2236.00
IUUC-Opr-070470	Ochotona princeps	90.87	0.00e+00	1377.00
IUUC-Ont-071268	Oreochromis niloticus	59.02	0.00e+00	1150.00
IUUC-Oan-073576	Ornithorhynchus anatinus	92.04	0.00e+00	1907.00
IUUC-Ocu-073971	Oryctolagus cuniculus	95.88	0.00e+00	2183.00
IUUC-Ola-086665	Oryzias latipes	34.38	1.00e-27	119.00
IUUC-Oga-088315	Otolemur garnettii	95.13	0.00e+00	2198.00
IUUC-Oar-090393	Ovis aries	95.05	0.00e+00	2189.00
IUUC-Ptr-091666	Pan troglodytes	95.72	0.00e+00	2167.00
IUUC-Pan-092630	Papio anubis	94.37	0.00e+00	2115.00
IUUC-Psi-093944	Pelodiscus sinensis	88.94	0.00e+00	2061.00
IUUC-Pfo-097469	Poecilia formosa	54.16	0.00e+00	1005.00
IUUC-Pab-098468	Pongo abelii	91.94	0.00e+00	2042.00
IUUC-Pca-100792	Procavia capensis	86.23	0.00e+00	1266.00
IUUC-Pva-103070	Pteropus vampyrus	93.87	0.00e+00	2166.00
IUUC-Sha-106725	Sarcophilus harrisii	91.64	0.00e+00	2108.00
IUUC-Sar-112923	Sorex araneus	94.04	0.00e+00	2194.00
IUUC-Ssc-115411	Sus scrofa	95.47	0.00e+00	2199.00
IUUC-Tgu-116794	Taeniopygia guttata	89.27	0.00e+00	2031.00
IUUC-Tru-118270	Takifugu rubripes	57.04	0.00e+00	951.00
IUUC-Tsy-119636	Tarsius syrichta	93.53	0.00e+00	2136.00
IUUC-Tni-120659	Tetraodon nigroviridis	59.30	0.00e+00	1031.00
IUUC-Tbe-127317	Tupaia belangeri	94.13	0.00e+00	1441.00
IUUC-Ttr-129141	Tursiops truncatus	96.67	0.00e+00	1357.00
IUUC-Vpa-130204	Vicugna pacos	95.13	0.00e+00	2245.00
IUUC-Xtr-132274	Xenopus tropicalis	51.33	0.00e+00	865.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence