iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049893

Ensembl Protein ID

ENSLACP00000021799.1

UniProt Accession

H3BIS8; H3BIS8_LATCH

Genbank Protein ID

ENSLACP00000021799

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01001000

Gene Name

UBR4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000019157.1	ENSLACT00000021940.1	ENSLACP00000021799.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	81.22	0.00e+00	5000.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

TSARGGRGQC FLWLRKKMAS SGGAAEPDWA SAVRPLLAAS YTAFQDRDLP QLVGSIINSE 60
SQILHHDKLY EPFYSSFVAL SSHYITTVCG QIPRNQLLSV AAACKVLIEF SLLRLENPDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTCAGCAC GCGGTGGGCG TGGCCAATGT TTTCTGTGGT TGAGGAAGAA GATGGCGTCC 60
AGCGGAGGAG CCGCAGAGCC GGACTGGGCC TCCGCGGTCA GGCCGCTCTT GGCAGCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	33.16	0.00e+00	852.00
IUUC-Aml-001346	Ailuropoda melanoleuca	81.11	0.00e+00	4959.00
IUUC-Atr-002587	Amborella trichopoda	32.64	6.00e-128	454.00
IUUC-Apl-003678	Anas platyrhynchos	82.79	0.00e+00	5046.00
IUUC-Aca-004517	Anolis carolinensis	88.94	0.00e+00	789.00
IUUC-Aly-006117	Arabidopsis lyrata	32.54	0.00e+00	770.00
IUUC-Ath-007289	Arabidopsis thaliana	32.42	0.00e+00	766.00
IUUC-Ame-011965	Astyanax mexicanus	80.85	0.00e+00	4549.00
IUUC-Bta-012498	Bos taurus	80.13	0.00e+00	4884.00
IUUC-Bdi-014555	Brachypodium distachyon	31.76	0.00e+00	870.00
IUUC-Bol-015522	Brassica oleracea	32.48	0.00e+00	788.00
IUUC-Bra-017090	Brassica rapa	32.21	0.00e+00	724.00
IUUC-Cel-018504	Caenorhabditis elegans	27.18	2.00e-153	538.00
IUUC-Cja-018983	Callithrix jacchus	81.10	0.00e+00	4964.00
IUUC-Cfa-020612	Canis familiaris	81.04	0.00e+00	4974.00
IUUC-Cpo-021700	Cavia porcellus	83.90	0.00e+00	8323.00
IUUC-Csa-023771	Chlorocebus sabaeus	81.20	0.00e+00	4939.00
IUUC-Cho-024474	Choloepus hoffmanni	83.26	0.00e+00	2135.00
IUUC-Cin-025247	Ciona intestinalis	59.07	0.00e+00	1052.00
IUUC-Csv-026255	Ciona savignyi	58.35	0.00e+00	1066.00
IUUC-Dre-028796	Danio rerio	81.69	0.00e+00	4912.00
IUUC-Dno-030056	Dasypus novemcinctus	80.44	0.00e+00	4923.00
IUUC-Dor-030711	Dipodomys ordii	87.92	0.00e+00	3217.00
IUUC-Dme-032113	Drosophila melanogaster	46.24	0.00e+00	1825.00
IUUC-Ete-032334	Echinops telfairi	88.92	0.00e+00	3263.00
IUUC-Eca-033327	Equus caballus	81.27	0.00e+00	4989.00
IUUC-Eeu-034698	Erinaceus europaeus	81.62	0.00e+00	1160.00
IUUC-Fca-035430	Felis catus	81.14	0.00e+00	4915.00
IUUC-Fal-037566	Ficedula albicollis	82.33	0.00e+00	5011.00
IUUC-Gmo-038674	Gadus morhua	79.24	0.00e+00	4591.00
IUUC-Gga-040641	Gallus gallus	82.40	0.00e+00	5064.00
IUUC-Gac-041870	Gasterosteus aculeatus	79.50	0.00e+00	4841.00
IUUC-Gma-042722	Glycine max	32.56	0.00e+00	796.00
IUUC-Ggo-045360	Gorilla gorilla	81.15	0.00e+00	4963.00
IUUC-Hsa-046955	Homo sapiens	81.12	0.00e+00	4960.00
IUUC-Hvu-047255	Hordeum vulgare	31.85	0.00e+00	899.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	80.24	0.00e+00	3254.00
IUUC-Lpe-050948	Leersia perrieri	32.88	0.00e+00	780.00
IUUC-Loc-052019	Lepisosteus oculatus	82.62	0.00e+00	5009.00
IUUC-Laf-054238	Loxodonta africana	80.03	0.00e+00	4863.00
IUUC-Mcc-054905	Macaca mulatta	81.09	0.00e+00	4965.00
IUUC-Meu-056297	Macropus eugenii	75.91	0.00e+00	4461.00
IUUC-Mtr-058169	Medicago truncatula	25.89	4.00e-62	235.00
IUUC-Mga-059621	Meleagris gallopavo	82.44	0.00e+00	5038.00
IUUC-Mmr-061395	Microcebus murinus	92.75	0.00e+00	2803.00
IUUC-Mdo-063037	Monodelphis domestica	81.03	0.00e+00	4046.00
IUUC-Mmu-063200	Mus musculus	80.40	0.00e+00	4904.00
IUUC-Mac-065267	Musa acuminata	31.80	0.00e+00	736.00
IUUC-Mpu-066639	Mustela putorius furo	81.27	0.00e+00	4971.00
IUUC-Mlu-067172	Myotis lucifugus	81.10	0.00e+00	4983.00
IUUC-Nle-069162	Nomascus leucogenys	80.98	0.00e+00	3922.00
IUUC-Opr-070567	Ochotona princeps	78.94	0.00e+00	1654.00
IUUC-Ont-072364	Oreochromis niloticus	79.40	0.00e+00	4757.00
IUUC-Oan-072804	Ornithorhynchus anatinus	76.95	0.00e+00	1299.00
IUUC-Ocu-074637	Oryctolagus cuniculus	81.06	0.00e+00	4920.00
IUUC-Oba-075215	Oryza barthii	33.39	0.00e+00	780.00
IUUC-Obr-076704	Oryza brachyantha	31.91	0.00e+00	829.00
IUUC-Ogl-077593	Oryza glaberrima	34.67	1.00e-171	599.00
IUUC-Ogu-078732	Oryza glumaepatula	33.29	0.00e+00	783.00
IUUC-Oin-079805	Oryza indica	31.27	0.00e+00	739.00
IUUC-Olo-080261	Oryza longistaminata	33.35	0.00e+00	785.00
IUUC-Ome-081392	Oryza meridionalis	31.56	0.00e+00	822.00
IUUC-Oni-082086	Oryza nivara	33.35	0.00e+00	784.00
IUUC-Opu-083535	Oryza punctata	33.35	0.00e+00	789.00
IUUC-Oru-084735	Oryza rufipogon	33.41	0.00e+00	785.00
IUUC-Ola-086799	Oryzias latipes	81.37	0.00e+00	7952.00
IUUC-Olu-087777	Ostreococcus lucimarinus	27.61	2.00e-86	315.00
IUUC-Oga-088126	Otolemur garnettii	88.75	0.00e+00	1458.00
IUUC-Oar-090428	Ovis aries	78.66	0.00e+00	4719.00
IUUC-Ptr-091407	Pan troglodytes	81.15	0.00e+00	4964.00
IUUC-Pan-091777	Papio anubis	80.86	0.00e+00	4932.00
IUUC-Psi-093587	Pelodiscus sinensis	81.90	0.00e+00	5129.00
IUUC-Ppa-095781	Physcomitrella patens	33.19	0.00e+00	885.00
IUUC-Pfo-097449	Poecilia formosa	79.37	0.00e+00	4794.00
IUUC-Pab-098450	Pongo abelii	79.43	0.00e+00	4833.00
IUUC-Pop-100041	Populus trichocarpa	31.67	0.00e+00	753.00
IUUC-Pca-100663	Procavia capensis	85.14	0.00e+00	2724.00
IUUC-Ppe-101386	Prunus persica	31.57	0.00e+00	773.00
IUUC-Pva-102701	Pteropus vampyrus	79.30	0.00e+00	4748.00
IUUC-Rno-105367	Rattus norvegicus	80.22	0.00e+00	4855.00
IUUC-Sha-107490	Sarcophilus harrisii	81.08	0.00e+00	4960.00
IUUC-Smo-109103	Selaginella moellendorffii	32.51	0.00e+00	856.00
IUUC-Sit-110670	Setaria italica	33.28	0.00e+00	845.00
IUUC-Sly-110952	Solanum lycopersicum	30.09	0.00e+00	811.00
IUUC-Stu-112624	Solanum tuberosum	32.96	1.00e-114	408.00
IUUC-Sar-113180	Sorex araneus	74.26	0.00e+00	3412.00
IUUC-Sbi-114596	Sorghum bicolor	32.01	0.00e+00	858.00
IUUC-Ssc-115377	Sus scrofa	92.61	0.00e+00	2804.00
IUUC-Tgu-117330	Taeniopygia guttata	81.47	0.00e+00	5001.00
IUUC-Tru-117635	Takifugu rubripes	77.96	0.00e+00	4771.00
IUUC-Tsy-119551	Tarsius syrichta	80.64	0.00e+00	3576.00
IUUC-Tni-119727	Tetraodon nigroviridis	77.89	0.00e+00	4762.00
IUUC-Tca-121017	Theobroma cacao	31.88	0.00e+00	801.00
IUUC-Tae-122892	Triticum aestivum	35.37	2.00e-25	110.00
IUUC-Tur-126292	Triticum urartu	33.16	0.00e+00	850.00
IUUC-Ttr-128332	Tursiops truncatus	79.91	0.00e+00	4078.00
IUUC-Vpa-130615	Vicugna pacos	78.03	0.00e+00	2128.00
IUUC-Vvi-131435	Vitis vinifera	32.89	0.00e+00	755.00
IUUC-Xtr-132130	Xenopus tropicalis	81.72	0.00e+00	1885.00
IUUC-Xma-133859	Xiphophorus maculatus	82.12	0.00e+00	8008.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence