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Tag Content
iUUCD ID IUUC-Dre-028715
Ensembl Protein ID ENSDARP00000030883.4
UniProt Accession F1RDB0; F1RDB0_DANRE
Genbank Protein ID ENSDARP00000030883
Protein Name Tudor domain-containing protein 3
Genbank Nucleotide ID CU459094
Gene Name tdrd3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000025421.8 ENSDART00000156080.2 ENSDARP00000129169.1
ENSDARG00000025421.8 ENSDART00000028955.4 ENSDARP00000030883.4
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/UBA 3.40e-12 47.0 292 329
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA
   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l+ ++eMGF+re+a+qaL+++nnnle+A+++Ll+
   Q: 292  DERALRDIMEMGFNREAARQALLDNNNNLEVALNLLLT 329
           7899********************************97 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MCDLSSALIK EGWYLTDEGI EECKSSSEKE KTSPTDIIQV ALNNDLRPIG KSFLPADINS 60
GRIEKLEGPC VLQVQKIRNV AASKDHEESQ AAPRMLRVQM TDGHTACTGL EFKQLSKISL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028715|UBD,UBA|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCGAGTAACA CACAATGGTG TCTTAGTGAG ATTTTAGACA GCGATTGCGT ACAAACTCTG 60
CAGCGTGTGT GAAGATGTGC GATTTAAGCT CGGCGCTTAT TAAAGAGGGC TGGTGAGTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028715|UBD,UBA|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like
PROSITE

PS50304--TUDOR
PS50030--UBA
Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA
SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0006397--P:mRNA processing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000323 Aegilops tauschii 32.35 4.00e-15 75.90
IUUC-Aml-001751 Ailuropoda melanoleuca 49.54 4.00e-171 595.00
IUUC-Atr-002788 Amborella trichopoda 31.31 6.00e-22 98.60
IUUC-Apl-004055 Anas platyrhynchos 49.93 1.00e-152 533.00
IUUC-Aca-004367 Anolis carolinensis 48.09 0.00e+00 630.00
IUUC-Aly-006072 Arabidopsis lyrata 35.37 1.00e-20 94.40
IUUC-Ath-007491 Arabidopsis thaliana 34.69 3.00e-20 93.20
IUUC-Ame-011439 Astyanax mexicanus 66.20 0.00e+00 836.00
IUUC-Bta-012894 Bos taurus 48.81 4.00e-165 575.00
IUUC-Bdi-014462 Brachypodium distachyon 29.38 2.00e-18 87.40
IUUC-Bol-015343 Brassica oleracea 35.53 3.00e-20 93.20
IUUC-Bra-016787 Brassica rapa 34.90 2.00e-19 90.50
IUUC-Cel-018154 Caenorhabditis elegans 32.79 2.00e-28 121.00
IUUC-Cja-019364 Callithrix jacchus 48.52 2.00e-141 496.00
IUUC-Cfa-021166 Canis familiaris 49.93 2.00e-169 589.00
IUUC-Cpo-021678 Cavia porcellus 41.05 6.00e-102 365.00
IUUC-Csa-023299 Chlorocebus sabaeus 51.25 0.00e+00 651.00
IUUC-Cho-024694 Choloepus hoffmanni 62.29 1.00e-87 317.00
IUUC-Cin-025191 Ciona intestinalis 39.66 5.00e-39 154.00
IUUC-Csv-026348 Ciona savignyi 51.92 7.00e-12 62.00
IUUC-Dno-030091 Dasypus novemcinctus 50.07 5.00e-172 598.00
IUUC-Dor-030807 Dipodomys ordii 41.55 4.00e-110 392.00
IUUC-Dme-031770 Drosophila melanogaster 31.96 2.00e-42 167.00
IUUC-Ete-032507 Echinops telfairi 33.68 1.00e-52 201.00
IUUC-Eca-033406 Equus caballus 47.18 3.00e-117 416.00
IUUC-Eeu-034600 Erinaceus europaeus 43.99 2.00e-106 380.00
IUUC-Fca-035916 Felis catus 50.74 2.00e-173 602.00
IUUC-Fal-036658 Ficedula albicollis 49.68 1.00e-171 597.00
IUUC-Gmo-038974 Gadus morhua 56.72 3.00e-116 412.00
IUUC-Gga-040195 Gallus gallus 50.26 3.00e-180 625.00
IUUC-Gac-042537 Gasterosteus aculeatus 56.92 0.00e+00 726.00
IUUC-Gma-044234 Glycine max 32.82 5.00e-22 99.00
IUUC-Ggo-044715 Gorilla gorilla 48.81 5.00e-150 525.00
IUUC-Hsa-045814 Homo sapiens 51.58 0.00e+00 649.00
IUUC-Hvu-047365 Hordeum vulgare 29.90 2.00e-14 73.60
IUUC-Itr-047866 Ictidomys tridecemlineatus 51.47 6.00e-176 611.00
IUUC-Lch-050393 Latimeria chalumnae 50.72 0.00e+00 637.00
IUUC-Lpe-050691 Leersia perrieri 33.16 2.00e-19 90.50
IUUC-Loc-052859 Lepisosteus oculatus 57.20 0.00e+00 708.00
IUUC-Laf-053953 Loxodonta africana 41.97 2.00e-69 256.00
IUUC-Mcc-055846 Macaca mulatta 50.93 0.00e+00 635.00
IUUC-Meu-056790 Macropus eugenii 56.56 3.00e-66 246.00
IUUC-Mtr-058749 Medicago truncatula 30.41 4.00e-18 85.90
IUUC-Mla-058959 Melampsora laricipopulina 36.76 1.00e-05 43.90
IUUC-Mga-059656 Meleagris gallopavo 50.00 3.00e-167 582.00
IUUC-Mmr-061089 Microcebus murinus 50.00 3.00e-163 568.00
IUUC-Mdo-063043 Monodelphis domestica 44.64 3.00e-105 375.00
IUUC-Mmu-063654 Mus musculus 49.87 6.00e-171 594.00
IUUC-Mac-064947 Musa acuminata 33.16 4.00e-18 85.90
IUUC-Mpu-066115 Mustela putorius furo 45.58 7.00e-118 418.00
IUUC-Mlu-066974 Myotis lucifugus 46.29 6.00e-143 501.00
IUUC-Nle-069184 Nomascus leucogenys 51.45 0.00e+00 648.00
IUUC-Opr-070770 Ochotona princeps 42.90 1.00e-108 387.00
IUUC-Ont-072040 Oreochromis niloticus 58.47 0.00e+00 767.00
IUUC-Oan-073448 Ornithorhynchus anatinus 56.19 6.00e-35 140.00
IUUC-Ocu-074405 Oryctolagus cuniculus 50.07 6.00e-178 617.00
IUUC-Oba-075977 Oryza barthii 30.00 9.00e-13 67.80
IUUC-Obr-076298 Oryza brachyantha 30.16 5.00e-16 79.00
IUUC-Ogl-077706 Oryza glaberrima 31.47 5.00e-13 69.30
IUUC-Ogu-078381 Oryza glumaepatula 28.76 2.00e-13 70.10
IUUC-Oin-080150 Oryza indica 29.20 3.00e-13 69.70
IUUC-Ome-081153 Oryza meridionalis 30.85 3.00e-12 66.20
IUUC-Oni-083115 Oryza nivara 29.57 2.00e-13 69.70
IUUC-Opu-083860 Oryza punctata 30.10 3.00e-17 83.20
IUUC-Oru-084859 Oryza rufipogon 30.50 3.00e-13 69.70
IUUC-Osa-085567 Oryza sativa 30.50 4.00e-12 65.90
IUUC-Ola-087049 Oryzias latipes 55.46 0.00e+00 736.00
IUUC-Oga-088455 Otolemur garnettii 51.51 6.00e-178 617.00
IUUC-Oar-090096 Ovis aries 50.20 2.00e-174 605.00
IUUC-Ptr-090974 Pan troglodytes 48.44 2.00e-149 522.00
IUUC-Pan-092657 Papio anubis 51.04 0.00e+00 644.00
IUUC-Psi-093113 Pelodiscus sinensis 47.36 2.00e-144 506.00
IUUC-Ppa-095466 Physcomitrella patens 38.62 2.00e-23 103.00
IUUC-Pfo-096631 Poecilia formosa 57.90 0.00e+00 756.00
IUUC-Pab-098070 Pongo abelii 51.32 0.00e+00 647.00
IUUC-Pop-099235 Populus trichocarpa 32.00 1.00e-17 85.10
IUUC-Pca-101032 Procavia capensis 65.29 6.00e-83 301.00
IUUC-Ppe-101793 Prunus persica 31.33 3.00e-18 86.70
IUUC-Pva-102290 Pteropus vampyrus 47.85 6.00e-139 488.00
IUUC-Rno-105080 Rattus norvegicus 45.31 1.00e-123 436.00
IUUC-Sha-107598 Sarcophilus harrisii 46.76 7.00e-152 531.00
IUUC-Sit-110735 Setaria italica 30.21 4.00e-17 82.80
IUUC-Sly-111126 Solanum lycopersicum 33.77 3.00e-17 83.20
IUUC-Stu-112780 Solanum tuberosum 30.50 6.00e-21 95.50
IUUC-Sar-113418 Sorex araneus 46.96 3.00e-130 459.00
IUUC-Sbi-113925 Sorghum bicolor 30.93 2.00e-18 87.00
IUUC-Sre-114917 Sporisorium reilianum 34.94 5.00e-06 45.80
IUUC-Ssc-115712 Sus scrofa 50.52 0.00e+00 634.00
IUUC-Tgu-117148 Taeniopygia guttata 51.03 0.00e+00 637.00
IUUC-Tru-117831 Takifugu rubripes 57.18 0.00e+00 714.00
IUUC-Tsy-118917 Tarsius syrichta 47.92 3.00e-128 452.00
IUUC-Tni-120783 Tetraodon nigroviridis 56.92 0.00e+00 723.00
IUUC-Tca-121430 Theobroma cacao 34.09 1.00e-05 44.70
IUUC-Tae-123752 Triticum aestivum 33.82 3.00e-15 76.60
IUUC-Tur-126238 Triticum urartu 32.58 2.00e-14 73.20
IUUC-Ttr-128615 Tursiops truncatus 42.63 1.00e-112 400.00
IUUC-Vpa-130531 Vicugna pacos 47.47 6.00e-139 488.00
IUUC-Vvi-131607 Vitis vinifera 31.77 3.00e-15 76.60
IUUC-Xtr-132787 Xenopus tropicalis 45.81 7.00e-148 518.00
IUUC-Xma-133815 Xiphophorus maculatus 57.11 0.00e+00 734.00
Created Date 25-Jun-2017

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