iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000008562.1	ENSORLT00000010749.1	ENSORLP00000010748.1
ENSORLG00000008562.1	ENSORLT00000010751.1	ENSORLP00000010750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.60e-14	52.3	624	689

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggede......k....slveCekCrewfHpaClkls.....veeelpnsekwiCpkCrsk 54
           +vCl+Cge+g+++      +    +l+eC++C+e++Hp+Clk +     v++elpn+  w+CpkC+++
   Q: 624  AVCLICGEAGKEDtvedeeEkfnlMLMECSICNEIVHPHCLKVKdsnglVNDELPNC--WECPKCNHA 689
           79*********9977766516889*********************************..*******85 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MAQTAGTCAE SGRRLRSICR RMYDENEDFS DVEEIENVRG FSVEEKLASD RYTADFVHLM 60
EGKDFTYEYV QKEALRTPLI FKEKAELGIR MPDPEFTVSE IKGLVGSRRS VDVMDVSTQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTGAATC TGTTACGCGT GCTAAGTGCT CCTGTAACTT TACCCACGCG CGAGGATGCT 60
TGCCTCGATC TGAGTGGAGT GACTGCAAAC AAACAAACCA GAGAGGATGA TGGCGCAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR003347--JmjC_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF02373--JmjC
PF16866--PHD_4
PF02008--zf-CXXC

SMART

SM00558--JmjC
SM00367--LRR_CC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001358	Ailuropoda melanoleuca	63.23	0.00e+00	977.00
IUUC-Apl-003787	Anas platyrhynchos	63.22	0.00e+00	1471.00
IUUC-Aca-004247	Anolis carolinensis	60.71	0.00e+00	1417.00
IUUC-Ame-011463	Astyanax mexicanus	82.90	0.00e+00	635.00
IUUC-Bta-013531	Bos taurus	64.71	0.00e+00	1568.00
IUUC-Cel-018303	Caenorhabditis elegans	44.26	4.00e-80	293.00
IUUC-Cja-018876	Callithrix jacchus	62.98	0.00e+00	937.00
IUUC-Cfa-020857	Canis familiaris	64.73	0.00e+00	1566.00
IUUC-Cpo-021967	Cavia porcellus	65.72	0.00e+00	1042.00
IUUC-Csa-023210	Chlorocebus sabaeus	69.24	0.00e+00	1053.00
IUUC-Dre-028272	Danio rerio	68.64	0.00e+00	1636.00
IUUC-Dno-030034	Dasypus novemcinctus	62.57	0.00e+00	1514.00
IUUC-Dor-030736	Dipodomys ordii	54.42	9.00e-172	597.00
IUUC-Eca-034255	Equus caballus	63.54	0.00e+00	1489.00
IUUC-Eeu-035038	Erinaceus europaeus	62.34	0.00e+00	758.00
IUUC-Fca-035786	Felis catus	64.50	0.00e+00	1505.00
IUUC-Fal-037589	Ficedula albicollis	64.32	0.00e+00	1560.00
IUUC-Gmo-038781	Gadus morhua	70.63	0.00e+00	734.00
IUUC-Gga-041103	Gallus gallus	67.90	0.00e+00	892.00
IUUC-Gac-041304	Gasterosteus aculeatus	76.29	0.00e+00	1878.00
IUUC-Ggo-044522	Gorilla gorilla	59.75	0.00e+00	1087.00
IUUC-Hsa-045877	Homo sapiens	63.46	0.00e+00	1540.00
IUUC-Itr-049003	Ictidomys tridecemlineatus	64.52	0.00e+00	875.00
IUUC-Lch-049950	Latimeria chalumnae	63.95	0.00e+00	1587.00
IUUC-Loc-051972	Lepisosteus oculatus	71.39	0.00e+00	1064.00
IUUC-Laf-053623	Loxodonta africana	67.70	0.00e+00	1033.00
IUUC-Mcc-054943	Macaca mulatta	69.13	0.00e+00	1042.00
IUUC-Meu-056259	Macropus eugenii	63.11	0.00e+00	1531.00
IUUC-Mla-058890	Melampsora laricipopulina	47.39	2.00e-74	272.00
IUUC-Mga-059671	Meleagris gallopavo	64.18	0.00e+00	1504.00
IUUC-Mmr-061003	Microcebus murinus	64.30	0.00e+00	1562.00
IUUC-Mmu-063584	Mus musculus	63.39	0.00e+00	1566.00
IUUC-Mpu-066056	Mustela putorius furo	63.33	0.00e+00	980.00
IUUC-Mlu-067850	Myotis lucifugus	64.39	0.00e+00	1546.00
IUUC-Nle-069837	Nomascus leucogenys	63.78	0.00e+00	1387.00
IUUC-Opr-070943	Ochotona princeps	63.89	0.00e+00	969.00
IUUC-Ont-071663	Oreochromis niloticus	81.32	0.00e+00	2023.00
IUUC-Oan-072934	Ornithorhynchus anatinus	57.73	0.00e+00	861.00
IUUC-Ocu-074706	Oryctolagus cuniculus	64.30	0.00e+00	1560.00
IUUC-Oga-088671	Otolemur garnettii	64.32	0.00e+00	773.00
IUUC-Oar-089560	Ovis aries	61.14	0.00e+00	1516.00
IUUC-Ptr-090875	Pan troglodytes	63.68	0.00e+00	1545.00
IUUC-Pan-091788	Papio anubis	67.81	0.00e+00	1004.00
IUUC-Psi-093382	Pelodiscus sinensis	63.25	0.00e+00	1536.00
IUUC-Pma-094687	Petromyzon marinus	50.13	8.00e-90	324.00
IUUC-Ppa-095609	Physcomitrella patens	43.83	7.00e-59	220.00
IUUC-Pfo-096272	Poecilia formosa	80.94	0.00e+00	1971.00
IUUC-Pab-097907	Pongo abelii	59.47	0.00e+00	1400.00
IUUC-Pca-100628	Procavia capensis	56.91	0.00e+00	795.00
IUUC-Pva-102956	Pteropus vampyrus	64.12	0.00e+00	677.00
IUUC-Rno-105722	Rattus norvegicus	61.71	0.00e+00	1194.00
IUUC-Sha-106626	Sarcophilus harrisii	59.10	0.00e+00	1340.00
IUUC-Sre-115112	Sporisorium reilianum	43.41	7.00e-62	231.00
IUUC-Ssc-115918	Sus scrofa	61.36	0.00e+00	1145.00
IUUC-Tgu-117229	Taeniopygia guttata	65.59	0.00e+00	920.00
IUUC-Tru-118638	Takifugu rubripes	73.76	0.00e+00	1758.00
IUUC-Tbe-127654	Tupaia belangeri	54.85	0.00e+00	1143.00
IUUC-Ttr-128821	Tursiops truncatus	58.80	0.00e+00	1372.00
IUUC-Uma-129458	Ustilago maydis	41.47	7.00e-61	228.00
IUUC-Xtr-131823	Xenopus tropicalis	60.70	0.00e+00	1450.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence