iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091602

UUCD1 version

UUC-PaT-00724

Ensembl Protein ID

ENSPTRP00000036236.6

UniProt Accession

H2QXL9; H2QXL9_PANTR

Genbank Protein ID

JAA13681.1; JAA32482.1; JAA35908.1

Protein Name

Ring finger protein 20

Genbank Nucleotide ID

AACZ03069130; GABD01000618; GABE01008831

Gene Name

RNF20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000021203.6	ENSPTRT00000039210.6	ENSPTRP00000036236.6

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.13	2.00e-35	148.00	IUUC-Cel-018659
E3 activity/RING/RING	100.00	0.00e+00	1619.00	IUUC-Hsa-046462
E3 activity/RING/RING	24.34	1.00e-12	70.50	IUUC-Sce-106384
E3 activity/RING/RING	43.08	3.00e-14	75.50	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSGIGNKRAA GEPGTSMPPE KKAAVEDSGT TVETIKLGGV SSTEELDIRT LQTKNRKLAE 60
MLDQRQAIED ELREHIEKLE RRQATDDASL LIVNRYWSQF DENIRIILKR YDLEQGLGDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAATCGCTG CACGGGCCTT GGTGAGTAAC TGCTGCGAGT TCTGTTCCTG CGCGGCGCCA 60
GTTCAAAGAA CTTAGGTTAG ATCACGCTTA GGGCCCAACA GGACTGTGCC GGGCCTCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015422--PyrdxlP-dep_Trfase_sub2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0003730--F:mRNA 3'-UTR binding
GO:0003713--F:transcription coactivator activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0030336--P:negative regulation of cell migration
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination
GO:0031062--P:positive regulation of histone methylation
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ptr:464625

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001976	Ailuropoda melanoleuca	98.26	0.00e+00	1652.00
IUUC-Atr-002836	Amborella trichopoda	29.17	1.00e-23	105.00
IUUC-Apl-003407	Anas platyrhynchos	87.54	0.00e+00	943.00
IUUC-Aca-004246	Anolis carolinensis	87.37	0.00e+00	928.00
IUUC-Ath-006615	Arabidopsis thaliana	45.90	3.00e-14	73.90
IUUC-Ago-007988	Ashbya gossypii	31.69	5.00e-15	76.30
IUUC-Acl-008319	Aspergillus clavatus	25.85	3.00e-14	73.90
IUUC-Ang-009601	Aspergillus niger	26.14	1.00e-15	78.20
IUUC-Aor-010142	Aspergillus oryzae	28.62	1.00e-15	78.20
IUUC-Ate-010547	Aspergillus terreus	26.15	2.00e-14	74.30
IUUC-Ame-011916	Astyanax mexicanus	77.93	1.00e-143	503.00
IUUC-Bgr-012245	Blumeria graminis	41.51	5.00e-10	59.70
IUUC-Bta-012357	Bos taurus	98.05	0.00e+00	1615.00
IUUC-Bci-013926	Botrytis cinerea	44.19	4.00e-08	53.50
IUUC-Bdi-015006	Brachypodium distachyon	26.46	5.00e-24	106.00
IUUC-Bol-016588	Brassica oleracea	30.69	3.00e-24	107.00
IUUC-Bra-017335	Brassica rapa	30.69	1.00e-24	108.00
IUUC-Cel-018659	Caenorhabditis elegans	34.41	7.00e-40	159.00
IUUC-Cja-019244	Callithrix jacchus	98.88	0.00e+00	1028.00
IUUC-Cfa-020320	Canis familiaris	98.46	0.00e+00	1649.00
IUUC-Cpo-021617	Cavia porcellus	95.29	0.00e+00	1664.00
IUUC-Csa-023509	Chlorocebus sabaeus	100.00	0.00e+00	1619.00
IUUC-Cho-024616	Choloepus hoffmanni	81.49	0.00e+00	971.00
IUUC-Cin-025174	Ciona intestinalis	58.68	6.00e-104	372.00
IUUC-Csv-025830	Ciona savignyi	53.42	3.00e-91	330.00
IUUC-Cne-026878	Cryptococcus neoformans	25.08	4.00e-14	73.60
IUUC-Cme-027134	Cyanidioschyzon merolae	39.06	1.00e-13	71.60
IUUC-Dno-029537	Dasypus novemcinctus	97.61	0.00e+00	1021.00
IUUC-Dor-030250	Dipodomys ordii	95.90	0.00e+00	1541.00
IUUC-Dse-031300	Dothistroma septosporum	38.46	2.00e-15	77.80
IUUC-Ete-033164	Echinops telfairi	94.26	0.00e+00	1214.00
IUUC-Eca-033347	Equus caballus	98.26	0.00e+00	1612.00
IUUC-Eeu-034801	Erinaceus europaeus	93.61	0.00e+00	635.00
IUUC-Fca-036024	Felis catus	98.56	0.00e+00	1677.00
IUUC-Fal-037622	Ficedula albicollis	88.43	0.00e+00	949.00
IUUC-Fox-038017	Fusarium oxysporum	24.66	3.00e-10	60.50
IUUC-Gmo-039446	Gadus morhua	77.55	3.00e-132	466.00
IUUC-Ggr-040117	Gaeumannomyces graminis	45.28	2.00e-11	64.30
IUUC-Gga-040412	Gallus gallus	89.48	0.00e+00	902.00
IUUC-Gac-042205	Gasterosteus aculeatus	60.68	5.00e-142	498.00
IUUC-Gma-043027	Glycine max	28.39	3.00e-33	137.00
IUUC-Ggo-044703	Gorilla gorilla	99.90	0.00e+00	1619.00
IUUC-Hsa-046462	Homo sapiens	100.00	0.00e+00	1619.00
IUUC-Hvu-047689	Hordeum vulgare	27.00	3.00e-27	117.00
IUUC-Itr-048298	Ictidomys tridecemlineatus	98.54	0.00e+00	1597.00
IUUC-Kpa-049345	Komagataella pastoris	33.87	4.00e-10	60.10
IUUC-Lch-049505	Latimeria chalumnae	74.86	0.00e+00	705.00
IUUC-Lpe-051253	Leersia perrieri	29.67	4.00e-31	129.00
IUUC-Loc-051951	Lepisosteus oculatus	63.47	6.00e-112	398.00
IUUC-Laf-054122	Loxodonta africana	96.93	0.00e+00	1602.00
IUUC-Mcc-054647	Macaca mulatta	100.00	0.00e+00	1619.00
IUUC-Meu-056559	Macropus eugenii	92.02	0.00e+00	1454.00
IUUC-Mpo-057568	Magnaporthe poae	45.28	2.00e-11	64.30
IUUC-Mtr-058247	Medicago truncatula	27.95	3.00e-26	114.00
IUUC-Mla-059072	Melampsora laricipopulina	25.62	6.00e-25	109.00
IUUC-Mga-059731	Meleagris gallopavo	95.18	2.00e-173	603.00
IUUC-Mvi-060341	Microbotryum violaceum	27.12	1.00e-20	95.50
IUUC-Mmr-061495	Microcebus murinus	98.77	0.00e+00	1664.00
IUUC-Mdo-062599	Monodelphis domestica	93.59	0.00e+00	973.00
IUUC-Mmu-063278	Mus musculus	97.42	0.00e+00	1020.00
IUUC-Mac-065103	Musa acuminata	28.65	1.00e-37	152.00
IUUC-Mpu-065910	Mustela putorius furo	98.15	0.00e+00	1654.00
IUUC-Mlu-067040	Myotis lucifugus	97.54	0.00e+00	1590.00
IUUC-Ncr-068695	Neurospora crassa	27.31	3.00e-12	67.00
IUUC-Nle-069058	Nomascus leucogenys	99.81	0.00e+00	1036.00
IUUC-Opr-071149	Ochotona princeps	96.61	0.00e+00	1006.00
IUUC-Ont-072543	Oreochromis niloticus	75.00	1.00e-133	470.00
IUUC-Oan-072996	Ornithorhynchus anatinus	96.97	0.00e+00	646.00
IUUC-Ocu-074773	Oryctolagus cuniculus	98.36	0.00e+00	1592.00
IUUC-Oba-075000	Oryza barthii	28.76	2.00e-27	117.00
IUUC-Obr-076532	Oryza brachyantha	27.55	2.00e-27	117.00
IUUC-Ogl-077200	Oryza glaberrima	29.20	2.00e-28	121.00
IUUC-Ogu-078279	Oryza glumaepatula	28.76	1.00e-27	118.00
IUUC-Oin-079097	Oryza indica	29.20	2.00e-28	121.00
IUUC-Olo-080612	Oryza longistaminata	48.33	4.00e-14	73.90
IUUC-Ome-081304	Oryza meridionalis	28.77	2.00e-27	117.00
IUUC-Oni-082162	Oryza nivara	28.76	2.00e-27	117.00
IUUC-Opu-083683	Oryza punctata	45.45	3.00e-15	77.40
IUUC-Oru-084382	Oryza rufipogon	28.76	2.00e-27	117.00
IUUC-Osa-085839	Oryza sativa	45.45	3.00e-15	77.40
IUUC-Ola-087287	Oryzias latipes	63.20	0.00e+00	887.00
IUUC-Olu-087683	Ostreococcus lucimarinus	36.36	9.00e-14	68.60
IUUC-Oga-088961	Otolemur garnettii	98.67	0.00e+00	1637.00
IUUC-Oar-089755	Ovis aries	97.95	0.00e+00	1607.00
IUUC-Pan-092263	Papio anubis	100.00	0.00e+00	1619.00
IUUC-Psi-093554	Pelodiscus sinensis	89.25	0.00e+00	947.00
IUUC-Pno-095079	Phaeosphaeria nodorum	33.33	5.00e-13	69.70
IUUC-Ppa-095735	Physcomitrella patens	31.79	2.00e-39	157.00
IUUC-Pab-098598	Pongo abelii	99.79	0.00e+00	1617.00
IUUC-Pop-099376	Populus trichocarpa	26.47	6.00e-30	126.00
IUUC-Pca-100157	Procavia capensis	96.15	0.00e+00	996.00
IUUC-Ppe-102065	Prunus persica	27.09	7.00e-26	112.00
IUUC-Pva-102720	Pteropus vampyrus	97.64	0.00e+00	1578.00
IUUC-Pgr-103536	Puccinia graminis	24.23	1.00e-20	95.10
IUUC-Rno-104996	Rattus norvegicus	97.05	0.00e+00	1015.00
IUUC-Sce-106384	Saccharomyces cerevisiae	23.97	6.00e-15	76.30
IUUC-Sha-107000	Sarcophilus harrisii	94.83	0.00e+00	964.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	45.00	1.00e-12	68.20
IUUC-Spo-108304	Schizosaccharomyces pombe	43.08	7.00e-15	75.90
IUUC-Smo-109550	Selaginella moellendorffii	29.63	5.00e-38	153.00
IUUC-Sly-111490	Solanum lycopersicum	29.92	2.00e-35	144.00
IUUC-Sar-113349	Sorex araneus	97.07	0.00e+00	941.00
IUUC-Sbi-114734	Sorghum bicolor	29.13	1.00e-23	102.00
IUUC-Sre-115087	Sporisorium reilianum	35.29	8.00e-16	79.30
IUUC-Ssc-115723	Sus scrofa	98.26	0.00e+00	1615.00
IUUC-Tgu-116549	Taeniopygia guttata	88.07	0.00e+00	876.00
IUUC-Tsy-118808	Tarsius syrichta	96.08	0.00e+00	1180.00
IUUC-Tae-124308	Triticum aestivum	29.89	5.00e-28	119.00
IUUC-Tur-126160	Triticum urartu	47.76	8.00e-16	79.30
IUUC-Tme-127177	Tuber melanosporum	24.51	8.00e-11	62.40
IUUC-Ttr-128266	Tursiops truncatus	97.85	0.00e+00	1599.00
IUUC-Uma-129488	Ustilago maydis	24.49	4.00e-18	86.70
IUUC-Vpa-130237	Vicugna pacos	98.16	0.00e+00	1654.00
IUUC-Vvi-131316	Vitis vinifera	28.91	3.00e-30	127.00
IUUC-Xtr-132589	Xenopus tropicalis	76.33	0.00e+00	710.00
IUUC-Yli-134445	Yarrowia lipolytica	39.06	8.00e-13	68.90
IUUC-Zma-135805	Zea mays	27.42	4.00e-27	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence