iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048895

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01073593

Gene Name

TMF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000028312.1	ENSSTOT00000021920.1	ENSSTOP00000023728.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	83.82	0.00e+00	1377.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MSWFNAAQLS SFAKQALSQA QKSIDRVLDI QEEPHAWAEA APYGEPGISP AVSGGWDTST 60
WGLKSNIEPQ SPPTASPKAI TKPVRRTVVD ESENFFSAFL SPTDVQGIQK SPVVSKPPAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGGAGGG AGGGTCGTGT CCCGGCGGGG CCGCTGGGCC ATGGCCGCCC ACTGACCAAC 60
CCCCAGCGCA GAGGGCGAGG CTGCCCACTC GACCTGGCGG CCTGAGGCGT CCGCGGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0001675--P:acrosome assembly
GO:0071407--P:cellular response to organic cyclic compound
GO:0042742--P:defense response to bacterium
GO:0030317--P:flagellated sperm motility
GO:0033327--P:Leydig cell differentiation
GO:0032275--P:luteinizing hormone secretion
GO:0043066--P:negative regulation of apoptotic process
GO:0010629--P:negative regulation of gene expression
GO:0001819--P:positive regulation of cytokine production
GO:2000845--P:positive regulation of testosterone secretion
GO:0061136--P:regulation of proteasomal protein catabolic process
GO:0007289--P:spermatid nucleus differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	31.93	2.00e-16	81.30
IUUC-Aml-001448	Ailuropoda melanoleuca	82.57	0.00e+00	1457.00
IUUC-Atr-003092	Amborella trichopoda	32.64	4.00e-38	153.00
IUUC-Apl-003546	Anas platyrhynchos	69.55	0.00e+00	1142.00
IUUC-Aca-004234	Anolis carolinensis	67.68	0.00e+00	1168.00
IUUC-Ath-007364	Arabidopsis thaliana	30.74	7.00e-38	152.00
IUUC-Acl-008271	Aspergillus clavatus	31.08	4.00e-13	70.10
IUUC-Afl-008405	Aspergillus flavus	28.24	1.00e-07	51.60
IUUC-Afu-009059	Aspergillus fumigatus	30.15	2.00e-12	67.40
IUUC-Ani-009416	Aspergillus nidulans	26.24	1.00e-13	71.60
IUUC-Ang-009857	Aspergillus niger	29.22	5.00e-12	66.20
IUUC-Aor-009910	Aspergillus oryzae	28.24	1.00e-07	51.60
IUUC-Ate-010427	Aspergillus terreus	35.40	1.00e-09	58.20
IUUC-Ame-011270	Astyanax mexicanus	64.96	0.00e+00	845.00
IUUC-Bgr-012100	Blumeria graminis	24.50	6.00e-12	66.20
IUUC-Bta-012337	Bos taurus	82.76	0.00e+00	1423.00
IUUC-Bci-013775	Botrytis cinerea	25.67	5.00e-12	66.60
IUUC-Bdi-014582	Brachypodium distachyon	34.73	3.00e-23	103.00
IUUC-Cja-019803	Callithrix jacchus	84.19	0.00e+00	1481.00
IUUC-Cfa-020451	Canis familiaris	82.00	0.00e+00	1420.00
IUUC-Cpo-021327	Cavia porcellus	82.22	0.00e+00	1372.00
IUUC-Csa-023803	Chlorocebus sabaeus	84.28	0.00e+00	1474.00
IUUC-Cho-024293	Choloepus hoffmanni	74.61	1.00e-167	583.00
IUUC-Cin-025461	Ciona intestinalis	41.77	1.00e-40	159.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	27.78	2.00e-09	58.20
IUUC-Cme-027311	Cyanidioschyzon merolae	33.96	1.00e-03	38.10
IUUC-Dre-028098	Danio rerio	58.81	0.00e+00	926.00
IUUC-Dno-029535	Dasypus novemcinctus	82.43	0.00e+00	1413.00
IUUC-Dor-031120	Dipodomys ordii	80.46	0.00e+00	1432.00
IUUC-Dse-031548	Dothistroma septosporum	30.50	3.00e-06	47.00
IUUC-Dme-031658	Drosophila melanogaster	31.46	4.00e-21	96.70
IUUC-Ete-032764	Echinops telfairi	74.23	0.00e+00	893.00
IUUC-Eca-034312	Equus caballus	82.92	0.00e+00	1423.00
IUUC-Eeu-034967	Erinaceus europaeus	77.49	0.00e+00	851.00
IUUC-Fca-036312	Felis catus	82.91	0.00e+00	1448.00
IUUC-Fal-036979	Ficedula albicollis	69.18	0.00e+00	1084.00
IUUC-Fox-037833	Fusarium oxysporum	45.45	7.00e-07	49.30
IUUC-Gmo-039175	Gadus morhua	65.83	0.00e+00	668.00
IUUC-Ggr-039752	Gaeumannomyces graminis	31.25	5.00e-11	63.20
IUUC-Gga-041252	Gallus gallus	69.46	0.00e+00	1151.00
IUUC-Gac-042186	Gasterosteus aculeatus	67.24	0.00e+00	648.00
IUUC-Gma-042878	Glycine max	28.93	5.00e-27	116.00
IUUC-Ggo-045127	Gorilla gorilla	83.36	0.00e+00	1455.00
IUUC-Hsa-046889	Homo sapiens	83.82	0.00e+00	1467.00
IUUC-Hvu-047231	Hordeum vulgare	34.17	4.00e-23	103.00
IUUC-Kpa-049375	Komagataella pastoris	33.65	4.00e-09	56.60
IUUC-Lch-049701	Latimeria chalumnae	65.46	0.00e+00	1108.00
IUUC-Lpe-051071	Leersia perrieri	31.93	2.00e-15	77.80
IUUC-Loc-052900	Lepisosteus oculatus	61.02	0.00e+00	1020.00
IUUC-Lma-053189	Leptosphaeria maculans	25.36	1.00e-14	75.10
IUUC-Laf-054583	Loxodonta africana	82.27	0.00e+00	1358.00
IUUC-Meu-056215	Macropus eugenii	64.96	4.00e-103	369.00
IUUC-Mor-057227	Magnaporthe oryzae	28.24	7.00e-08	52.80
IUUC-Mpo-057315	Magnaporthe poae	42.31	2.00e-07	50.80
IUUC-Mtr-058276	Medicago truncatula	28.46	2.00e-25	111.00
IUUC-Mga-059916	Meleagris gallopavo	69.71	0.00e+00	1111.00
IUUC-Mmr-061789	Microcebus murinus	77.57	0.00e+00	1031.00
IUUC-Mdo-062174	Monodelphis domestica	74.30	0.00e+00	1286.00
IUUC-Mmu-063422	Mus musculus	79.43	0.00e+00	1308.00
IUUC-Mac-065498	Musa acuminata	31.60	4.00e-28	119.00
IUUC-Mpu-065744	Mustela putorius furo	81.72	0.00e+00	1476.00
IUUC-Mlu-066925	Myotis lucifugus	80.06	0.00e+00	1312.00
IUUC-Nfi-068254	Neosartorya fischeri	30.15	2.00e-12	68.20
IUUC-Ncr-068887	Neurospora crassa	24.76	5.00e-11	63.20
IUUC-Nle-070100	Nomascus leucogenys	83.91	0.00e+00	1468.00
IUUC-Opr-071131	Ochotona princeps	78.65	0.00e+00	1019.00
IUUC-Ont-071378	Oreochromis niloticus	60.11	0.00e+00	903.00
IUUC-Oan-073705	Ornithorhynchus anatinus	74.35	0.00e+00	1323.00
IUUC-Ocu-074158	Oryctolagus cuniculus	82.42	0.00e+00	1486.00
IUUC-Oba-075498	Oryza barthii	32.21	3.00e-16	80.90
IUUC-Obr-076136	Oryza brachyantha	31.01	8.00e-33	135.00
IUUC-Ogl-077020	Oryza glaberrima	35.29	2.00e-24	107.00
IUUC-Ogu-078875	Oryza glumaepatula	32.21	4.00e-19	90.10
IUUC-Oin-079223	Oryza indica	35.29	3.00e-24	107.00
IUUC-Olo-080859	Oryza longistaminata	34.11	3.00e-17	84.00
IUUC-Ome-081621	Oryza meridionalis	32.49	8.00e-17	82.80
IUUC-Oni-082628	Oryza nivara	32.21	6.00e-16	79.70
IUUC-Opu-083825	Oryza punctata	32.21	6.00e-19	89.70
IUUC-Oru-084959	Oryza rufipogon	31.93	2.00e-15	78.20
IUUC-Osa-086104	Oryza sativa	35.29	2.00e-24	107.00
IUUC-Ola-087148	Oryzias latipes	56.89	0.00e+00	926.00
IUUC-Olu-087856	Ostreococcus lucimarinus	32.66	4.00e-15	76.60
IUUC-Oga-088598	Otolemur garnettii	81.81	0.00e+00	1422.00
IUUC-Oar-090450	Ovis aries	81.88	0.00e+00	1406.00
IUUC-Ptr-091659	Pan troglodytes	83.64	0.00e+00	1459.00
IUUC-Pan-091964	Papio anubis	70.57	0.00e+00	1160.00
IUUC-Psi-093585	Pelodiscus sinensis	75.43	0.00e+00	892.00
IUUC-Pma-094379	Petromyzon marinus	49.82	0.00e+00	696.00
IUUC-Pno-095032	Phaeosphaeria nodorum	27.74	2.00e-10	60.80
IUUC-Ppa-095425	Physcomitrella patens	32.26	3.00e-53	203.00
IUUC-Pfo-096386	Poecilia formosa	64.92	0.00e+00	825.00
IUUC-Pab-098042	Pongo abelii	78.29	0.00e+00	723.00
IUUC-Pop-099005	Populus trichocarpa	37.18	3.00e-14	72.80
IUUC-Pca-100308	Procavia capensis	82.45	0.00e+00	998.00
IUUC-Ppe-101449	Prunus persica	28.50	1.00e-27	119.00
IUUC-Pva-103119	Pteropus vampyrus	77.90	0.00e+00	993.00
IUUC-Pte-104335	Pyrenophora teres	29.30	1.00e-09	58.50
IUUC-Pyt-104547	Pyrenophora triticirepentis	29.94	2.00e-10	61.20
IUUC-Rno-105578	Rattus norvegicus	80.29	0.00e+00	1304.00
IUUC-Sha-106612	Sarcophilus harrisii	74.15	0.00e+00	1237.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	35.71	4.00e-04	39.30
IUUC-Spo-108059	Schizosaccharomyces pombe	29.46	1.00e-07	50.80
IUUC-Ssl-108390	Sclerotinia sclerotiorum	25.67	7.00e-12	65.90
IUUC-Smo-108781	Selaginella moellendorffii	29.53	3.00e-16	79.30
IUUC-Sit-109754	Setaria italica	35.01	7.00e-24	106.00
IUUC-Sly-111573	Solanum lycopersicum	30.16	2.00e-33	137.00
IUUC-Sar-113118	Sorex araneus	76.93	0.00e+00	1290.00
IUUC-Sbi-114519	Sorghum bicolor	32.96	3.00e-23	103.00
IUUC-Ssc-115826	Sus scrofa	77.97	0.00e+00	1330.00
IUUC-Tgu-116702	Taeniopygia guttata	70.13	0.00e+00	1103.00
IUUC-Tru-117915	Takifugu rubripes	63.91	0.00e+00	784.00
IUUC-Tsy-119224	Tarsius syrichta	83.27	0.00e+00	1444.00
IUUC-Tni-120157	Tetraodon nigroviridis	57.75	0.00e+00	865.00
IUUC-Tca-121361	Theobroma cacao	29.29	1.00e-19	91.30
IUUC-Tre-122066	Trichoderma reesei	37.50	1.00e-08	55.10
IUUC-Tvi-122562	Trichoderma virens	33.33	5.00e-09	56.20
IUUC-Tae-123602	Triticum aestivum	33.89	4.00e-20	93.60
IUUC-Tme-126895	Tuber melanosporum	26.52	5.00e-10	59.70
IUUC-Tbe-128074	Tupaia belangeri	76.63	0.00e+00	1057.00
IUUC-Ttr-128190	Tursiops truncatus	82.91	0.00e+00	1445.00
IUUC-Vda-129710	Verticillium dahliae	32.74	1.00e-10	62.00
IUUC-Vpa-130072	Vicugna pacos	83.08	0.00e+00	1326.00
IUUC-Vvi-130853	Vitis vinifera	35.29	2.00e-09	57.80
IUUC-Xtr-131969	Xenopus tropicalis	63.73	0.00e+00	1040.00
IUUC-Xma-133623	Xiphophorus maculatus	64.16	0.00e+00	852.00
IUUC-Yli-134550	Yarrowia lipolytica	23.89	3.00e-13	70.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence