iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090544

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03111904

Gene Name

RAB40B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000009808.4	ENSPTRT00000018015.4	ENSPTRP00000016690.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.60e-13	50.3	217	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++a+++c++ + +   dkLPLP +L+++L+++++
   Q: 217  LW-RPSKVLSLQDLCCRAVVSCTPVHLV---DKLPLPIALRSHLKSFSM 261
           67.99********************888...***************976 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

EQGLGARAAP LGAGPPPLRS APQAGHGWGS RAVTMSALGS PVRAYDFLLK FLLVGDSDVG 60
KGEILASLQD GAAESPYGHP AGIDYKTTTI LLDGRRVKLQ LWDTSGQGRF CTIFRSYSRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGGCGGG GCGGGGCCGG AGGCGAGCAA GGACTCGGGG CCCGCGCGGC GCCTCTCGGG 60
GCCGGGCCGC CGCCTCTGCG CTCAGCCCCG CAGGCCGGGC ATGGGTGGGG AAGCCGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005635--C:nuclear envelope
GO:0048471--C:perinuclear region of cytoplasm
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:1990967--P:multi-organism toxin transport
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003206	Anas platyrhynchos	90.58	2.00e-123	434.00
IUUC-Aca-005004	Anolis carolinensis	88.48	2.00e-137	481.00
IUUC-Ame-011456	Astyanax mexicanus	84.50	1.00e-139	488.00
IUUC-Bta-012683	Bos taurus	89.93	3.00e-142	497.00
IUUC-Cja-019849	Callithrix jacchus	85.81	4.00e-146	510.00
IUUC-Cfa-020527	Canis familiaris	94.50	5.00e-111	393.00
IUUC-Cpo-021644	Cavia porcellus	93.12	1.00e-150	525.00
IUUC-Csa-023150	Chlorocebus sabaeus	98.88	8.00e-157	545.00
IUUC-Cho-024716	Choloepus hoffmanni	90.26	8.00e-80	288.00
IUUC-Dre-028614	Danio rerio	84.01	2.00e-136	477.00
IUUC-Eca-033492	Equus caballus	95.05	3.00e-126	443.00
IUUC-Fca-035705	Felis catus	95.48	6.00e-125	439.00
IUUC-Gga-040925	Gallus gallus	89.18	1.00e-144	505.00
IUUC-Hsa-046747	Homo sapiens	99.25	1.00e-157	548.00
IUUC-Loc-052325	Lepisosteus oculatus	88.10	2.00e-144	504.00
IUUC-Laf-053340	Loxodonta africana	92.16	9.00e-147	512.00
IUUC-Mcc-054711	Macaca mulatta	96.31	2.00e-152	531.00
IUUC-Mga-059204	Meleagris gallopavo	89.55	1.00e-144	504.00
IUUC-Mmu-064144	Mus musculus	92.16	5.00e-149	520.00
IUUC-Mpu-066352	Mustela putorius furo	93.67	1.00e-122	431.00
IUUC-Nle-070096	Nomascus leucogenys	98.13	4.00e-155	540.00
IUUC-Opr-070662	Ochotona princeps	90.67	5.00e-143	499.00
IUUC-Ont-072397	Oreochromis niloticus	85.04	6.00e-137	479.00
IUUC-Ocu-074559	Oryctolagus cuniculus	93.28	2.00e-139	488.00
IUUC-Olo-080270	Oryza longistaminata	34.41	5.00e-12	65.50
IUUC-Oga-088133	Otolemur garnettii	94.05	7.00e-151	525.00
IUUC-Oar-089702	Ovis aries	89.55	2.00e-115	407.00
IUUC-Pan-092812	Papio anubis	98.88	8.00e-157	545.00
IUUC-Psi-093120	Pelodiscus sinensis	89.93	7.00e-147	512.00
IUUC-Pfo-096238	Poecilia formosa	91.18	5.00e-132	463.00
IUUC-Pab-098735	Pongo abelii	98.88	8.00e-157	545.00
IUUC-Pva-102361	Pteropus vampyrus	93.20	4.00e-140	489.00
IUUC-Rno-105063	Rattus norvegicus	93.66	4.00e-151	526.00
IUUC-Sar-113518	Sorex araneus	87.11	2.00e-129	454.00
IUUC-Ssc-115719	Sus scrofa	88.53	5.00e-145	506.00
IUUC-Tsy-119011	Tarsius syrichta	96.11	2.00e-101	361.00
IUUC-Xtr-132079	Xenopus tropicalis	87.31	5.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence