iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115719

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP085448

Gene Name

RAB40B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000017129.2	ENSSSCT00000018647.2	ENSSSCP00000018146.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	5.30e-13	48.9	216	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           lw ++s++ SLq+LC++a+++c++ + +   d+LPLP +L+ +L+++++
   Q: 216  LW-RPSKVLSLQDLCCRAVVSCTPVHLV---DRLPLPVALRGHLKSFSM 260
           67.99********************888...***************976 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

SGDFGARAAL ACRATATAPF HWAGYGHGRR RDTMSAGASP VRAYDFLLKF LLVGDSDVGK 60
GEILASLQDG AAESPYGHPA GIDYETTTIL LDGRRVKLQL WDTSGQGRFC TIFRSYSRGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGGGGGACT TTGGGGCCCG AGCGGCCCTG GCGTGCCGGG CCACCGCCAC TGCACCGTTC 60
CACTGGGCCG GGTATGGGCA CGGGCGACGG CGCGACACGA TGAGTGCCGG GGCCAGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	75.28	2.00e-118	418.00
IUUC-Apl-003206	Anas platyrhynchos	86.10	3.00e-117	413.00
IUUC-Aca-005004	Anolis carolinensis	83.64	3.00e-130	457.00
IUUC-Ame-011456	Astyanax mexicanus	79.78	3.00e-133	467.00
IUUC-Bta-012683	Bos taurus	88.85	9.00e-141	492.00
IUUC-Cja-018870	Callithrix jacchus	81.72	2.00e-127	447.00
IUUC-Cfa-020527	Canis familiaris	90.55	7.00e-107	379.00
IUUC-Cpo-021644	Cavia porcellus	87.73	1.00e-142	498.00
IUUC-Csa-023150	Chlorocebus sabaeus	91.04	1.00e-145	508.00
IUUC-Cho-024716	Choloepus hoffmanni	90.26	7.00e-80	288.00
IUUC-Dre-028614	Danio rerio	80.52	1.00e-129	455.00
IUUC-Dno-029998	Dasypus novemcinctus	72.89	3.00e-90	326.00
IUUC-Dor-030584	Dipodomys ordii	63.68	2.00e-82	297.00
IUUC-Dme-031810	Drosophila melanogaster	64.13	6.00e-88	316.00
IUUC-Ete-033080	Echinops telfairi	78.06	2.00e-117	414.00
IUUC-Eca-033492	Equus caballus	89.69	6.00e-120	422.00
IUUC-Eeu-034590	Erinaceus europaeus	67.12	1.00e-85	308.00
IUUC-Fca-035705	Felis catus	90.54	7.00e-120	422.00
IUUC-Fal-037070	Ficedula albicollis	73.80	9.00e-118	415.00
IUUC-Gmo-039605	Gadus morhua	76.58	2.00e-128	451.00
IUUC-Gga-040925	Gallus gallus	85.07	8.00e-138	482.00
IUUC-Gac-041833	Gasterosteus aculeatus	72.26	2.00e-122	431.00
IUUC-Ggo-045012	Gorilla gorilla	81.72	2.00e-128	451.00
IUUC-Hsa-046747	Homo sapiens	90.67	1.00e-144	504.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	74.17	4.00e-118	416.00
IUUC-Lch-050193	Latimeria chalumnae	76.01	3.00e-129	453.00
IUUC-Loc-052325	Lepisosteus oculatus	84.01	8.00e-137	479.00
IUUC-Laf-053340	Loxodonta africana	88.81	8.00e-140	489.00
IUUC-Mcc-054711	Macaca mulatta	88.56	2.00e-141	494.00
IUUC-Mga-059204	Meleagris gallopavo	85.45	3.00e-138	483.00
IUUC-Mmr-061380	Microcebus murinus	75.19	7.00e-118	416.00
IUUC-Mdo-062438	Monodelphis domestica	72.99	1.00e-117	415.00
IUUC-Mmu-064144	Mus musculus	89.55	2.00e-142	497.00
IUUC-Mpu-066352	Mustela putorius furo	90.09	8.00e-120	422.00
IUUC-Mlu-067741	Myotis lucifugus	74.54	1.00e-118	418.00
IUUC-Nle-070096	Nomascus leucogenys	89.93	4.00e-143	499.00
IUUC-Opr-070662	Ochotona princeps	86.19	4.00e-135	473.00
IUUC-Ont-072397	Oreochromis niloticus	80.66	6.00e-130	456.00
IUUC-Oan-073432	Ornithorhynchus anatinus	73.78	5.00e-97	346.00
IUUC-Ocu-074559	Oryctolagus cuniculus	88.43	2.00e-133	467.00
IUUC-Olo-080270	Oryza longistaminata	36.56	2.00e-12	66.20
IUUC-Ola-086486	Oryzias latipes	72.76	8.00e-122	429.00
IUUC-Oga-088133	Otolemur garnettii	89.22	3.00e-143	500.00
IUUC-Oar-089702	Ovis aries	88.24	1.00e-114	404.00
IUUC-Ptr-090544	Pan troglodytes	89.34	7.00e-143	499.00
IUUC-Pan-092812	Papio anubis	91.04	1.00e-145	508.00
IUUC-Psi-093120	Pelodiscus sinensis	86.57	6.00e-141	492.00
IUUC-Pma-094679	Petromyzon marinus	72.77	8.00e-99	352.00
IUUC-Pfo-097105	Poecilia formosa	76.21	1.00e-127	448.00
IUUC-Pab-098735	Pongo abelii	91.04	1.00e-145	508.00
IUUC-Pca-100775	Procavia capensis	75.84	8.00e-72	262.00
IUUC-Pva-102361	Pteropus vampyrus	89.20	3.00e-132	464.00
IUUC-Rno-105063	Rattus norvegicus	89.55	2.00e-143	501.00
IUUC-Sha-106536	Sarcophilus harrisii	72.99	1.00e-117	415.00
IUUC-Sar-113518	Sorex araneus	82.42	2.00e-121	427.00
IUUC-Tgu-116858	Taeniopygia guttata	78.24	5.00e-93	332.00
IUUC-Tru-118264	Takifugu rubripes	63.27	4.00e-117	414.00
IUUC-Tsy-119011	Tarsius syrichta	87.22	7.00e-94	335.00
IUUC-Tni-120350	Tetraodon nigroviridis	76.21	5.00e-128	449.00
IUUC-Tbe-127818	Tupaia belangeri	29.27	7.00e-11	60.50
IUUC-Ttr-129236	Tursiops truncatus	74.54	2.00e-119	421.00
IUUC-Xtr-132079	Xenopus tropicalis	84.33	1.00e-137	482.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence