iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130849

UUCD1 version

UUC-ViV-00793

Ensembl Protein ID

VIT_04s0008g05880.t01

UniProt Accession

F6H3J1; F6H3J1_VITVI

Genbank Protein ID

CCB46826.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

VIT_04s0008g05880

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g05880	VIT_04s0008g05880.t01	VIT_04s0008g05880.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-08	35.4	52	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C  Cge+g+    l+ Ce C+ ++Hp+Cl ++ + +lp++  w Cp+C 
   Q: 52   DSCQACGESGN----LLSCETCTYAYHPKCLLPPLKAPLPSN--WRCPQCV 96
           57999999998....***************************..******7 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSLVERLRV RSDRRPIYNL DESDDDADLV HGKSGMSQEK FEKIVRSDAK DDSCQACGES 60
GNLLSCETCT YAYHPKCLLP PLKAPLPSNW RCPQCVSPLN DIDKILDCEM RPTVAGDSDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATATGAGT AGTTTGGTTG AGAGACTACG TGTAAGGTCA GATCGAAGGC CAATTTACAA 60
TTTAGATGAA TCAGATGATG ACGCTGATCT TGTGCATGGG AAATCTGGCA TGTCTCAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009057--Homeobox-like
IPR027417--P-loop_NTPase
IPR024934--Rubredoxin-like_dom
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50903--RUBREDOXIN_LIKE
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0005506--F:iron ion binding
GO:0008270--F:zinc ion binding

KEGG

vvi:100261114

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	41.34	0.00e+00	707.00
IUUC-Apl-004175	Anas platyrhynchos	42.47	0.00e+00	712.00
IUUC-Aca-004560	Anolis carolinensis	43.02	0.00e+00	706.00
IUUC-Aly-005645	Arabidopsis lyrata	45.28	3.00e-159	556.00
IUUC-Ath-007406	Arabidopsis thaliana	41.98	1.00e-162	567.00
IUUC-Ame-011098	Astyanax mexicanus	42.91	0.00e+00	697.00
IUUC-Bta-012868	Bos taurus	43.06	0.00e+00	709.00
IUUC-Bol-016073	Brassica oleracea	41.10	1.00e-161	563.00
IUUC-Bra-016724	Brassica rapa	41.10	4.00e-162	565.00
IUUC-Cel-018108	Caenorhabditis elegans	40.68	0.00e+00	705.00
IUUC-Cja-019018	Callithrix jacchus	42.78	0.00e+00	708.00
IUUC-Cfa-021055	Canis familiaris	42.96	0.00e+00	708.00
IUUC-Cpo-021523	Cavia porcellus	43.10	0.00e+00	709.00
IUUC-Csa-024136	Chlorocebus sabaeus	42.78	0.00e+00	704.00
IUUC-Cho-024361	Choloepus hoffmanni	44.41	2.00e-168	586.00
IUUC-Csv-025847	Ciona savignyi	41.43	0.00e+00	682.00
IUUC-Dre-028226	Danio rerio	41.91	0.00e+00	708.00
IUUC-Dno-029656	Dasypus novemcinctus	42.22	0.00e+00	714.00
IUUC-Dor-030167	Dipodomys ordii	42.78	0.00e+00	703.00
IUUC-Dme-032150	Drosophila melanogaster	40.26	0.00e+00	707.00
IUUC-Ete-032757	Echinops telfairi	43.84	2.00e-171	596.00
IUUC-Eca-034112	Equus caballus	42.22	0.00e+00	713.00
IUUC-Eeu-034777	Erinaceus europaeus	43.58	3.00e-97	350.00
IUUC-Fca-036043	Felis catus	43.43	0.00e+00	709.00
IUUC-Fal-037312	Ficedula albicollis	42.42	0.00e+00	712.00
IUUC-Gmo-038957	Gadus morhua	44.17	0.00e+00	649.00
IUUC-Gga-040216	Gallus gallus	42.42	0.00e+00	715.00
IUUC-Gac-042478	Gasterosteus aculeatus	41.99	0.00e+00	709.00
IUUC-Gma-043999	Glycine max	79.22	0.00e+00	2139.00
IUUC-Ggo-045538	Gorilla gorilla	42.78	0.00e+00	703.00
IUUC-Hsa-045916	Homo sapiens	42.78	0.00e+00	705.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	42.68	0.00e+00	702.00
IUUC-Lch-050343	Latimeria chalumnae	40.74	0.00e+00	713.00
IUUC-Loc-052383	Lepisosteus oculatus	42.02	0.00e+00	675.00
IUUC-Laf-053870	Loxodonta africana	42.78	0.00e+00	707.00
IUUC-Mcc-055773	Macaca mulatta	41.34	0.00e+00	706.00
IUUC-Meu-056292	Macropus eugenii	35.85	9.00e-71	262.00
IUUC-Mga-059633	Meleagris gallopavo	42.47	0.00e+00	714.00
IUUC-Mmr-061223	Microcebus murinus	42.71	0.00e+00	703.00
IUUC-Mdo-062971	Monodelphis domestica	42.91	0.00e+00	709.00
IUUC-Mmu-063920	Mus musculus	42.87	0.00e+00	693.00
IUUC-Mpu-065809	Mustela putorius furo	42.96	0.00e+00	708.00
IUUC-Mlu-067355	Myotis lucifugus	42.92	0.00e+00	703.00
IUUC-Nle-069842	Nomascus leucogenys	42.78	0.00e+00	700.00
IUUC-Opr-070960	Ochotona princeps	41.94	0.00e+00	674.00
IUUC-Ont-072418	Oreochromis niloticus	42.38	0.00e+00	697.00
IUUC-Oan-072885	Ornithorhynchus anatinus	43.81	4.00e-151	529.00
IUUC-Ocu-074438	Oryctolagus cuniculus	42.66	0.00e+00	699.00
IUUC-Ola-086880	Oryzias latipes	43.51	0.00e+00	714.00
IUUC-Oga-088374	Otolemur garnettii	42.96	0.00e+00	712.00
IUUC-Oar-089784	Ovis aries	42.78	0.00e+00	705.00
IUUC-Ptr-090799	Pan troglodytes	42.78	0.00e+00	704.00
IUUC-Pan-092441	Papio anubis	42.22	0.00e+00	713.00
IUUC-Psi-093530	Pelodiscus sinensis	42.70	0.00e+00	733.00
IUUC-Ppa-095213	Physcomitrella patens	59.83	0.00e+00	1238.00
IUUC-Pfo-097530	Poecilia formosa	42.70	0.00e+00	700.00
IUUC-Pab-098174	Pongo abelii	42.84	0.00e+00	679.00
IUUC-Pca-100829	Procavia capensis	46.01	0.00e+00	647.00
IUUC-Pva-103186	Pteropus vampyrus	41.25	0.00e+00	699.00
IUUC-Rno-104884	Rattus norvegicus	42.79	0.00e+00	691.00
IUUC-Sha-107233	Sarcophilus harrisii	43.00	0.00e+00	711.00
IUUC-Smo-108946	Selaginella moellendorffii	42.58	1.00e-170	594.00
IUUC-Sly-110976	Solanum lycopersicum	74.48	0.00e+00	1945.00
IUUC-Ssc-115751	Sus scrofa	42.78	0.00e+00	704.00
IUUC-Tgu-117484	Taeniopygia guttata	42.42	0.00e+00	716.00
IUUC-Tru-118745	Takifugu rubripes	42.70	0.00e+00	705.00
IUUC-Tsy-119261	Tarsius syrichta	46.31	1.00e-142	501.00
IUUC-Tni-120039	Tetraodon nigroviridis	42.32	0.00e+00	708.00
IUUC-Tbe-128117	Tupaia belangeri	42.63	5.00e-108	385.00
IUUC-Ttr-128478	Tursiops truncatus	40.61	0.00e+00	683.00
IUUC-Vpa-130209	Vicugna pacos	53.75	2.00e-87	317.00
IUUC-Xtr-132668	Xenopus tropicalis	41.61	0.00e+00	689.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence