iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131643

UUCD1 version

UUC-ViV-00351

Ensembl Protein ID

VIT_13s0074g00030.t01

UniProt Accession

D7UBS0; D7UBS0_VITVI

Genbank Protein ID

CBI40185.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596753

Gene Name

VIT_13s0074g00030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0074g00030	VIT_13s0074g00030.t01	VIT_13s0074g00030.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-09	35.8	279	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H +++++laf ++ +l+++++ D++ik+WDlr++ +l++
   Q: 279  HHGPISALAFhPNgHLMATAGMDKKIKLWDLRKFEVLQT 317
           8899*******777999****************999875 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGVEQENGTP TEMVPASEQD ISDELDVKVK KYLRGEGANL EALQDKKLKG QLVIREELYG 60
KSAKAAAKAE KWLMPSEGGY LEAEGIEKTW RIKQESIARE VDILSSKNQY DIVLPELGPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGTTGCAG CACGGGAAGG CGCCAGCTTT GTTTACAAAC GCAAGCATTC AATCATTTGT 60
TCTCCCAACG CTGCGTTTCC ATCGATTTTG GGTTTTCAAT CGACCGAGTT CTAGGTTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

vvi:100241077

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	62.62	0.00e+00	636.00
IUUC-Atr-002528	Amborella trichopoda	66.21	0.00e+00	628.00
IUUC-Aly-005663	Arabidopsis lyrata	71.48	0.00e+00	725.00
IUUC-Ath-007405	Arabidopsis thaliana	71.11	0.00e+00	722.00
IUUC-Ang-009764	Aspergillus niger	39.67	2.00e-87	315.00
IUUC-Ame-011572	Astyanax mexicanus	41.97	6.00e-88	317.00
IUUC-Bdi-014915	Brachypodium distachyon	63.60	0.00e+00	632.00
IUUC-Bol-015965	Brassica oleracea	71.37	0.00e+00	712.00
IUUC-Bra-016837	Brassica rapa	70.68	0.00e+00	684.00
IUUC-Cel-018465	Caenorhabditis elegans	40.56	1.00e-82	299.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	45.93	3.00e-128	451.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	38.72	4.00e-97	347.00
IUUC-Cne-026784	Cryptococcus neoformans	35.38	4.00e-68	251.00
IUUC-Dre-028533	Danio rerio	40.71	3.00e-83	301.00
IUUC-Dse-031280	Dothistroma septosporum	37.20	2.00e-87	315.00
IUUC-Eeu-034982	Erinaceus europaeus	40.60	1.00e-49	189.00
IUUC-Fox-037980	Fusarium oxysporum	36.80	5.00e-91	327.00
IUUC-Fso-038154	Fusarium solani	37.87	1.00e-93	336.00
IUUC-Gmo-039548	Gadus morhua	43.01	2.00e-87	315.00
IUUC-Ggr-039976	Gaeumannomyces graminis	37.29	7.00e-92	330.00
IUUC-Gac-042249	Gasterosteus aculeatus	41.35	3.00e-89	322.00
IUUC-Gma-043274	Glycine max	78.96	0.00e+00	842.00
IUUC-Hvu-047436	Hordeum vulgare	66.49	1.00e-134	472.00
IUUC-Kpa-049329	Komagataella pastoris	40.11	6.00e-87	313.00
IUUC-Lpe-051501	Leersia perrieri	66.15	4.00e-175	610.00
IUUC-Loc-051736	Lepisosteus oculatus	43.75	1.00e-87	316.00
IUUC-Meu-056419	Macropus eugenii	41.78	1.00e-73	270.00
IUUC-Mor-057146	Magnaporthe oryzae	37.08	5.00e-87	314.00
IUUC-Mpo-057512	Magnaporthe poae	36.88	2.00e-92	332.00
IUUC-Mtr-058139	Medicago truncatula	75.53	0.00e+00	780.00
IUUC-Mla-059028	Melampsora laricipopulina	40.55	1.00e-81	296.00
IUUC-Mvi-060533	Microbotryum violaceum	39.69	2.00e-84	305.00
IUUC-Mac-065643	Musa acuminata	70.28	0.00e+00	700.00
IUUC-Ont-071977	Oreochromis niloticus	43.85	2.00e-88	318.00
IUUC-Oba-075525	Oryza barthii	66.02	0.00e+00	641.00
IUUC-Obr-076468	Oryza brachyantha	65.57	0.00e+00	637.00
IUUC-Ogl-077395	Oryza glaberrima	66.02	0.00e+00	641.00
IUUC-Ogu-078730	Oryza glumaepatula	65.83	0.00e+00	640.00
IUUC-Oin-079797	Oryza indica	66.02	0.00e+00	642.00
IUUC-Olo-080539	Oryza longistaminata	65.70	0.00e+00	633.00
IUUC-Oni-082635	Oryza nivara	65.83	0.00e+00	639.00
IUUC-Opu-083733	Oryza punctata	65.83	0.00e+00	647.00
IUUC-Oru-084560	Oryza rufipogon	66.02	0.00e+00	642.00
IUUC-Osa-085463	Oryza sativa	65.83	0.00e+00	641.00
IUUC-Ola-086667	Oryzias latipes	44.33	2.00e-96	345.00
IUUC-Olu-087881	Ostreococcus lucimarinus	41.89	2.00e-101	361.00
IUUC-Pma-094742	Petromyzon marinus	38.96	6.00e-77	280.00
IUUC-Ppa-095230	Physcomitrella patens	48.69	2.00e-131	461.00
IUUC-Pop-099756	Populus trichocarpa	78.58	0.00e+00	791.00
IUUC-Ppe-101354	Prunus persica	79.58	0.00e+00	741.00
IUUC-Pte-104146	Pyrenophora teres	36.23	1.00e-85	309.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	35.28	2.00e-83	302.00
IUUC-Sce-106227	Saccharomyces cerevisiae	39.63	7.00e-87	313.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	40.21	4.00e-97	347.00
IUUC-Spo-108359	Schizosaccharomyces pombe	44.38	4.00e-93	334.00
IUUC-Smo-108814	Selaginella moellendorffii	52.98	9.00e-127	446.00
IUUC-Sit-110158	Setaria italica	65.84	1.00e-178	619.00
IUUC-Sly-111569	Solanum lycopersicum	77.10	0.00e+00	742.00
IUUC-Stu-112403	Solanum tuberosum	78.24	0.00e+00	741.00
IUUC-Sbi-114817	Sorghum bicolor	65.58	4.00e-166	577.00
IUUC-Sre-115150	Sporisorium reilianum	41.23	4.00e-88	318.00
IUUC-Tru-118535	Takifugu rubripes	43.09	3.00e-91	328.00
IUUC-Tca-121165	Theobroma cacao	80.42	0.00e+00	802.00
IUUC-Tre-122114	Trichoderma reesei	39.16	7.00e-96	343.00
IUUC-Tvi-122437	Trichoderma virens	40.62	3.00e-94	338.00
IUUC-Tae-125874	Triticum aestivum	62.62	0.00e+00	635.00
IUUC-Tur-126307	Triticum urartu	60.14	4.00e-179	620.00
IUUC-Tme-127208	Tuber melanosporum	42.24	3.00e-104	371.00
IUUC-Ttr-129047	Tursiops truncatus	42.93	1.00e-86	313.00
IUUC-Uma-129320	Ustilago maydis	41.55	1.00e-88	320.00
IUUC-Vda-129926	Verticillium dahliae	36.50	2.00e-89	322.00
IUUC-Yli-134674	Yarrowia lipolytica	41.62	3.00e-91	328.00
IUUC-Zma-135903	Zea mays	65.85	1.00e-161	562.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence