iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109331

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB52

Genbank Nucleotide ID

GL377684

Gene Name

SELMODRAFT_133410

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_133410	EFJ07498	EFJ07498

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-20	74.1	351	420

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ flCpI  e+M++Pvv+++G+ty+ ++I++w++   + +P+t+ +l++++l+P+++l +li +w  + 
   Q: 351  PPSIFLCPIFREVMQEPVVAADGYTYEYEAIRQWFQAHDT-SPLTNLRLEHKQLTPHHALNKLITEWKTRA 420
           5999******************************887776.**************************9876 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAKLDVDSSS TADREDDSCE GPSRPPPQTR RKSLQELSLL SQRTFKEYEY AELEAATKNF 60
SLDLKLGEGG YGLVFKGKLH GRDVAIKVLK KEGFQRTQEF QHEVELLGRI QHPHMVVLLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAGC TCGACGTTGA TAGCTCCAGC ACTGCCGACC GAGAGGATGA CTCCTGTGAA 60
GGACCTTCCA GGCCACCTCC GCAAACACGG AGGAAATCCC TCCAAGAACT GTCGCTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0418--Kinase
KW-0436--Ligase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0723--Serine/threonine-protein kinase
KW-0808--Transferase

Interpro

IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR017441--Protein_kinase_ATP_BS
IPR008271--Ser/Thr_kinase_AS
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00107--PROTEIN_KINASE_ATP
PS50011--PROTEIN_KINASE_DOM
PS00108--PROTEIN_KINASE_ST
PS51698--U_BOX

Pfam

PF00069--Pkinase
PF04564--U-box

SMART

SM00220--S_TKc
SM00504--Ubox

Gene Ontology

GO:0005524--F:ATP binding
GO:0016874--F:ligase activity
GO:0004674--F:protein serine/threonine kinase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_133410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000476	Aegilops tauschii	51.28	3.00e-98	352.00
IUUC-Atr-002478	Amborella trichopoda	51.06	8.00e-104	370.00
IUUC-Aca-004768	Anolis carolinensis	28.92	3.00e-20	93.60
IUUC-Aly-006136	Arabidopsis lyrata	50.63	8.00e-111	394.00
IUUC-Ath-007422	Arabidopsis thaliana	50.25	2.00e-112	399.00
IUUC-Ame-011785	Astyanax mexicanus	26.76	1.00e-23	104.00
IUUC-Bdi-014960	Brachypodium distachyon	47.59	4.00e-104	371.00
IUUC-Bol-015784	Brassica oleracea	52.39	6.00e-111	394.00
IUUC-Bra-017651	Brassica rapa	52.13	4.00e-111	395.00
IUUC-Cfa-020080	Canis familiaris	30.53	6.00e-22	98.20
IUUC-Cre-022669	Chlamydomonas reinhardtii	49.11	2.00e-88	318.00
IUUC-Cin-025605	Ciona intestinalis	29.71	1.00e-20	93.60
IUUC-Csv-026102	Ciona savignyi	28.27	3.00e-22	99.00
IUUC-Dor-030202	Dipodomys ordii	30.11	1.00e-20	93.60
IUUC-Dme-032105	Drosophila melanogaster	32.32	1.00e-21	97.40
IUUC-Fal-036753	Ficedula albicollis	29.07	1.00e-22	101.00
IUUC-Gmo-038497	Gadus morhua	32.42	3.00e-21	96.30
IUUC-Gga-040976	Gallus gallus	30.22	2.00e-20	94.00
IUUC-Gma-043059	Glycine max	49.61	3.00e-111	395.00
IUUC-Hvu-047757	Hordeum vulgare	50.51	5.00e-102	364.00
IUUC-Lch-049935	Latimeria chalumnae	31.41	8.00e-19	88.60
IUUC-Lpe-050717	Leersia perrieri	52.80	4.00e-117	414.00
IUUC-Meu-056631	Macropus eugenii	29.57	8.00e-29	121.00
IUUC-Mtr-057737	Medicago truncatula	51.06	3.00e-112	398.00
IUUC-Mdo-062495	Monodelphis domestica	30.84	5.00e-30	125.00
IUUC-Mac-064428	Musa acuminata	51.42	2.00e-111	395.00
IUUC-Oba-075616	Oryza barthii	53.85	5.00e-119	421.00
IUUC-Obr-076215	Oryza brachyantha	53.32	2.00e-118	419.00
IUUC-Ogl-077159	Oryza glaberrima	53.85	5.00e-119	421.00
IUUC-Ogu-078228	Oryza glumaepatula	53.58	1.00e-118	420.00
IUUC-Oin-079079	Oryza indica	53.85	1.00e-118	420.00
IUUC-Olo-080309	Oryza longistaminata	55.24	2.00e-113	402.00
IUUC-Ome-081104	Oryza meridionalis	53.58	2.00e-118	419.00
IUUC-Oni-082428	Oryza nivara	53.99	6.00e-119	421.00
IUUC-Opu-083527	Oryza punctata	53.58	1.00e-118	419.00
IUUC-Oru-084678	Oryza rufipogon	53.85	1.00e-118	420.00
IUUC-Osa-086117	Oryza sativa	53.85	1.00e-118	420.00
IUUC-Ola-086581	Oryzias latipes	26.91	5.00e-24	105.00
IUUC-Oga-087967	Otolemur garnettii	31.60	5.00e-19	89.40
IUUC-Oar-089467	Ovis aries	30.09	4.00e-21	96.30
IUUC-Psi-093760	Pelodiscus sinensis	27.55	1.00e-21	98.20
IUUC-Pfo-096542	Poecilia formosa	32.14	4.00e-23	102.00
IUUC-Pop-100071	Populus trichocarpa	47.53	1.00e-109	389.00
IUUC-Pca-100945	Procavia capensis	28.90	1.00e-18	88.60
IUUC-Ppe-101208	Prunus persica	50.00	4.00e-107	381.00
IUUC-Pva-103086	Pteropus vampyrus	31.82	1.00e-25	111.00
IUUC-Sha-106932	Sarcophilus harrisii	31.11	2.00e-24	106.00
IUUC-Sit-110427	Setaria italica	52.38	2.00e-116	412.00
IUUC-Sly-111796	Solanum lycopersicum	51.06	2.00e-115	409.00
IUUC-Stu-112731	Solanum tuberosum	51.60	4.00e-117	414.00
IUUC-Sar-113364	Sorex araneus	29.24	1.00e-17	83.60
IUUC-Sbi-113963	Sorghum bicolor	52.12	9.00e-116	410.00
IUUC-Tca-121565	Theobroma cacao	50.38	1.00e-111	397.00
IUUC-Tae-125570	Triticum aestivum	51.28	3.00e-99	355.00
IUUC-Tur-126105	Triticum urartu	51.03	4.00e-99	355.00
IUUC-Ttr-128550	Tursiops truncatus	32.27	9.00e-27	114.00
IUUC-Vpa-130060	Vicugna pacos	31.07	1.00e-19	90.50
IUUC-Vvi-131372	Vitis vinifera	49.11	3.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence