iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022899

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Intraflagellar transport particle protein 80

Genbank Nucleotide ID

DS496126

Gene Name

IFT80; CHLREDRAFT_24171

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_24171	EDP03367	EDP03367

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-06	28.0	102	132

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH++   +l++  d t l++++ Dg++k+W+
   Q: 102  GHKGACISLRWsYDgTALATAGEDGSVKIWS 132
           788999999**95569**************7 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MRLKVKQSSA NVHSELTAAV GWNVWNELFT CSDDQTIHKW NMLGEPEQKV STLDAYFTDM 60
HWYPVSSKKT QAGGTDVFAV ACTDGSVKIL SRTGRVEKSI EGHKGACISL RWSYDGTALA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGAATAGA GGATAGCATA ACTATCAGCT TTCCAGGCCA AATTACAAGA AAGGGCTCGT 60
TCTAATTGTT CTTCCGGGTG CGCGCGGCCT TCGCTTGCGA CCAACCTCCC TCAAACTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0181--Complete proteome
KW-0282--Flagellum
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005929--C:cilium
GO:0030992--C:intraciliary transport particle B
GO:0031514--C:motile cilium
GO:0060271--P:cilium assembly

KEGG

cre:CHLREDRAFT_24171

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001564	Ailuropoda melanoleuca	49.66	7.00e-117	412.00
IUUC-Apl-003721	Anas platyrhynchos	46.34	0.00e+00	688.00
IUUC-Aca-004488	Anolis carolinensis	46.66	0.00e+00	686.00
IUUC-Ame-011402	Astyanax mexicanus	48.05	4.00e-121	426.00
IUUC-Bta-013037	Bos taurus	42.91	4.00e-167	580.00
IUUC-Cel-018360	Caenorhabditis elegans	34.69	5.00e-137	479.00
IUUC-Cja-019076	Callithrix jacchus	46.08	3.00e-156	544.00
IUUC-Cfa-020999	Canis familiaris	46.65	0.00e+00	682.00
IUUC-Cpo-021333	Cavia porcellus	43.37	2.00e-168	584.00
IUUC-Csa-023699	Chlorocebus sabaeus	46.96	0.00e+00	686.00
IUUC-Cho-024904	Choloepus hoffmanni	43.36	4.00e-97	347.00
IUUC-Cin-025399	Ciona intestinalis	42.54	0.00e+00	634.00
IUUC-Csv-026186	Ciona savignyi	42.54	5.00e-179	619.00
IUUC-Dre-028276	Danio rerio	47.00	0.00e+00	691.00
IUUC-Dno-029824	Dasypus novemcinctus	46.84	0.00e+00	691.00
IUUC-Dor-031141	Dipodomys ordii	44.24	0.00e+00	635.00
IUUC-Dme-031620	Drosophila melanogaster	32.69	3.00e-97	347.00
IUUC-Ete-033028	Echinops telfairi	34.29	9.00e-66	243.00
IUUC-Eca-033339	Equus caballus	46.93	0.00e+00	676.00
IUUC-Eeu-034909	Erinaceus europaeus	44.44	2.00e-117	414.00
IUUC-Fca-035780	Felis catus	46.83	0.00e+00	677.00
IUUC-Fal-037447	Ficedula albicollis	44.52	0.00e+00	630.00
IUUC-Gmo-038657	Gadus morhua	42.55	8.00e-128	449.00
IUUC-Gga-040689	Gallus gallus	46.66	0.00e+00	690.00
IUUC-Gac-041586	Gasterosteus aculeatus	45.57	2.00e-152	531.00
IUUC-Hsa-047005	Homo sapiens	46.48	0.00e+00	689.00
IUUC-Itr-048757	Ictidomys tridecemlineatus	47.26	1.00e-146	511.00
IUUC-Lch-050459	Latimeria chalumnae	47.64	0.00e+00	698.00
IUUC-Loc-052774	Lepisosteus oculatus	46.37	2.00e-156	544.00
IUUC-Laf-053765	Loxodonta africana	46.34	0.00e+00	663.00
IUUC-Mcc-055052	Macaca mulatta	46.96	0.00e+00	686.00
IUUC-Meu-056368	Macropus eugenii	45.52	6.00e-114	403.00
IUUC-Mga-059488	Meleagris gallopavo	46.73	0.00e+00	690.00
IUUC-Mmr-061527	Microcebus murinus	46.96	0.00e+00	686.00
IUUC-Mdo-062850	Monodelphis domestica	46.37	4.00e-158	550.00
IUUC-Mmu-063117	Mus musculus	46.29	0.00e+00	681.00
IUUC-Mpu-066550	Mustela putorius furo	47.59	0.00e+00	637.00
IUUC-Mlu-067772	Myotis lucifugus	46.31	0.00e+00	640.00
IUUC-Nle-069215	Nomascus leucogenys	45.96	0.00e+00	682.00
IUUC-Opr-070725	Ochotona princeps	36.61	2.00e-125	441.00
IUUC-Ont-072147	Oreochromis niloticus	46.30	0.00e+00	678.00
IUUC-Oan-073176	Ornithorhynchus anatinus	54.95	1.00e-34	136.00
IUUC-Ocu-073896	Oryctolagus cuniculus	46.37	3.00e-156	543.00
IUUC-Ola-086767	Oryzias latipes	44.67	8.00e-149	519.00
IUUC-Oga-088113	Otolemur garnettii	46.63	0.00e+00	689.00
IUUC-Oar-089683	Ovis aries	45.56	0.00e+00	659.00
IUUC-Ptr-091563	Pan troglodytes	46.61	0.00e+00	690.00
IUUC-Pan-092042	Papio anubis	46.96	0.00e+00	686.00
IUUC-Psi-093306	Pelodiscus sinensis	46.68	0.00e+00	714.00
IUUC-Ppa-095694	Physcomitrella patens	47.79	0.00e+00	705.00
IUUC-Pfo-096800	Poecilia formosa	45.65	0.00e+00	657.00
IUUC-Pab-098356	Pongo abelii	46.35	0.00e+00	685.00
IUUC-Pva-102246	Pteropus vampyrus	47.19	0.00e+00	629.00
IUUC-Rno-105195	Rattus norvegicus	46.29	0.00e+00	676.00
IUUC-Sha-107056	Sarcophilus harrisii	46.31	0.00e+00	682.00
IUUC-Smo-109240	Selaginella moellendorffii	44.34	0.00e+00	640.00
IUUC-Sar-113301	Sorex araneus	45.76	4.00e-71	260.00
IUUC-Ssc-116040	Sus scrofa	51.41	1.00e-72	264.00
IUUC-Tgu-117127	Taeniopygia guttata	46.13	0.00e+00	677.00
IUUC-Tru-118663	Takifugu rubripes	45.38	0.00e+00	665.00
IUUC-Tsy-119207	Tarsius syrichta	48.18	5.00e-120	423.00
IUUC-Tni-120705	Tetraodon nigroviridis	45.42	0.00e+00	664.00
IUUC-Tbe-127434	Tupaia belangeri	44.04	1.00e-114	405.00
IUUC-Ttr-128937	Tursiops truncatus	46.12	0.00e+00	684.00
IUUC-Vpa-130518	Vicugna pacos	43.93	9.00e-178	615.00
IUUC-Xtr-131879	Xenopus tropicalis	44.47	0.00e+00	660.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence