iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pan-092344

Ensembl Protein ID

ENSPANP00000011536.1

UniProt Accession

A0A096NF48; A0A096NF48_PAPAN

Genbank Protein ID

ENSPANP00000011536

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHZZ01054819

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPANG00000016792.1	ENSPANT00000004925.1	ENSPANP00000011536.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 82
           *************************87777777888899977777899********8 PP

Organism

Papio anubis

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCA CCGTGGGTTT CAAGCCGCTG CTAGGGGATG CACACAGCAT GGACAACCTG 60
GAGAAGCAGC TCATCTGCCC CATCTGCCTG GAGATGTTCT CCAAACCAGT GGTGATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	98.19	8.00e-135	472.00
IUUC-Bta-013385	Bos taurus	97.60	1.00e-177	615.00
IUUC-Cja-019697	Callithrix jacchus	80.28	2.00e-143	501.00
IUUC-Cfa-020995	Canis familiaris	98.79	2.00e-170	591.00
IUUC-Cpo-021913	Cavia porcellus	97.50	0.00e+00	680.00
IUUC-Cre-022560	Chlamydomonas reinhardtii	44.44	1.00e-05	45.80
IUUC-Csa-023342	Chlorocebus sabaeus	99.72	0.00e+00	664.00
IUUC-Cin-025224	Ciona intestinalis	52.43	2.00e-94	338.00
IUUC-Csv-026374	Ciona savignyi	51.96	6.00e-82	296.00
IUUC-Dre-027562	Danio rerio	68.08	2.00e-145	508.00
IUUC-Dno-029582	Dasypus novemcinctus	98.48	8.00e-172	596.00
IUUC-Dor-031139	Dipodomys ordii	96.10	0.00e+00	646.00
IUUC-Ete-032346	Echinops telfairi	99.51	3.00e-109	388.00
IUUC-Eca-033645	Equus caballus	98.20	3.00e-179	620.00
IUUC-Eeu-035333	Erinaceus europaeus	69.12	2.00e-115	409.00
IUUC-Fca-035865	Felis catus	98.18	0.00e+00	630.00
IUUC-Fal-036978	Ficedula albicollis	81.46	1.00e-166	578.00
IUUC-Gga-040452	Gallus gallus	78.81	2.00e-162	564.00
IUUC-Ggo-044467	Gorilla gorilla	87.56	8.00e-176	609.00
IUUC-Hsa-046379	Homo sapiens	97.22	0.00e+00	626.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	97.77	0.00e+00	637.00
IUUC-Lch-050029	Latimeria chalumnae	78.35	4.00e-153	534.00
IUUC-Loc-051801	Lepisosteus oculatus	80.97	5.00e-136	476.00
IUUC-Laf-054215	Loxodonta africana	97.50	0.00e+00	672.00
IUUC-Mcc-055027	Macaca mulatta	89.55	0.00e+00	647.00
IUUC-Meu-056412	Macropus eugenii	94.94	1.00e-167	582.00
IUUC-Mmr-060920	Microcebus murinus	98.33	0.00e+00	670.00
IUUC-Mdo-062832	Monodelphis domestica	96.66	3.00e-165	573.00
IUUC-Mmu-063707	Mus musculus	95.56	1.00e-178	618.00
IUUC-Mlu-067653	Myotis lucifugus	81.85	4.00e-139	487.00
IUUC-Nle-069020	Nomascus leucogenys	99.17	0.00e+00	655.00
IUUC-Opr-070577	Ochotona princeps	79.51	4.00e-144	504.00
IUUC-Ont-072491	Oreochromis niloticus	62.25	2.00e-120	425.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.76	6.00e-173	599.00
IUUC-Ocu-074454	Oryctolagus cuniculus	97.22	0.00e+00	633.00
IUUC-Oga-088361	Otolemur garnettii	98.86	1.00e-177	615.00
IUUC-Oar-089950	Ovis aries	81.38	2.00e-140	491.00
IUUC-Ptr-090785	Pan troglodytes	87.31	3.00e-175	607.00
IUUC-Pab-098322	Pongo abelii	95.83	2.00e-179	621.00
IUUC-Pca-100385	Procavia capensis	76.42	7.00e-123	433.00
IUUC-Rno-105134	Rattus norvegicus	95.56	0.00e+00	682.00
IUUC-Sha-106768	Sarcophilus harrisii	96.35	8.00e-178	615.00
IUUC-Tgu-117494	Taeniopygia guttata	80.12	6.00e-158	549.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence