iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000017346.1	ENSPSIT00000019699.1	ENSPSIP00000019608.1
ENSPSIG00000017346.1	ENSPSIT00000019708.1	ENSPSIP00000019617.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-10	39.0	687	717

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHtd+ ++la  ++  l++++++D ++ +WD
   Q: 687  GHTDELWGLAThPSrSLFLTCGHDRQVCMWD 717
           8********99977799************** PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MARGAMDRCS NHSPADETIS ALHPDRLASL ELRLQSQEEE LTLVKSALAD ALRRLNLYDR 60
QIPLLTQQLL TANDAIPDAQ QFLDSSPGHG VSWVQLTTSY SPVPASGVVR HEELGAGNPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNCTAG CCTCTACTCT GGGAAAGGAG GGGTCAGCGT 60
GGCTGTGGGG TCAGGGAGCG GGACTCCTGG GTCCCCTTCC GCCCCCCATG TCCAGTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

pss:102460908

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011151	Astyanax mexicanus	72.71	0.00e+00	1026.00
IUUC-Bta-012809	Bos taurus	76.75	0.00e+00	1064.00
IUUC-Cja-019497	Callithrix jacchus	76.78	0.00e+00	1077.00
IUUC-Cfa-020836	Canis familiaris	76.56	0.00e+00	1071.00
IUUC-Cpo-021285	Cavia porcellus	76.67	0.00e+00	1089.00
IUUC-Csa-023442	Chlorocebus sabaeus	76.78	0.00e+00	1078.00
IUUC-Dre-027697	Danio rerio	71.75	0.00e+00	1099.00
IUUC-Dno-029179	Dasypus novemcinctus	75.91	0.00e+00	1077.00
IUUC-Dor-030271	Dipodomys ordii	75.64	0.00e+00	1044.00
IUUC-Eca-033995	Equus caballus	76.92	0.00e+00	1074.00
IUUC-Fca-036507	Felis catus	76.81	0.00e+00	1069.00
IUUC-Gmo-038631	Gadus morhua	71.84	0.00e+00	956.00
IUUC-Gga-041067	Gallus gallus	83.59	0.00e+00	1091.00
IUUC-Gac-042487	Gasterosteus aculeatus	70.35	0.00e+00	969.00
IUUC-Ggo-044578	Gorilla gorilla	77.21	0.00e+00	1046.00
IUUC-Itr-047963	Ictidomys tridecemlineatus	76.28	0.00e+00	1081.00
IUUC-Lch-049525	Latimeria chalumnae	72.99	0.00e+00	1001.00
IUUC-Laf-054051	Loxodonta africana	75.00	0.00e+00	1077.00
IUUC-Meu-056318	Macropus eugenii	71.30	0.00e+00	911.00
IUUC-Mdo-062421	Monodelphis domestica	75.64	0.00e+00	1044.00
IUUC-Mmu-064240	Mus musculus	76.99	0.00e+00	1082.00
IUUC-Mpu-065950	Mustela putorius furo	76.64	0.00e+00	1070.00
IUUC-Nle-069939	Nomascus leucogenys	76.35	0.00e+00	1066.00
IUUC-Opr-070593	Ochotona princeps	72.26	0.00e+00	1003.00
IUUC-Ont-072032	Oreochromis niloticus	72.68	0.00e+00	1095.00
IUUC-Oan-073228	Ornithorhynchus anatinus	77.50	0.00e+00	1039.00
IUUC-Ocu-074660	Oryctolagus cuniculus	76.64	0.00e+00	1074.00
IUUC-Ola-087269	Oryzias latipes	60.23	0.00e+00	1112.00
IUUC-Oar-090190	Ovis aries	75.39	0.00e+00	1073.00
IUUC-Pan-091858	Papio anubis	76.67	0.00e+00	1072.00
IUUC-Pfo-096045	Poecilia formosa	71.39	0.00e+00	1054.00
IUUC-Pab-098492	Pongo abelii	76.78	0.00e+00	1072.00
IUUC-Pca-100221	Procavia capensis	72.02	0.00e+00	1031.00
IUUC-Pva-103024	Pteropus vampyrus	76.92	0.00e+00	1073.00
IUUC-Rno-105563	Rattus norvegicus	76.42	0.00e+00	1090.00
IUUC-Ssc-116107	Sus scrofa	76.74	0.00e+00	1071.00
IUUC-Ttr-128375	Tursiops truncatus	71.94	0.00e+00	976.00
IUUC-Xtr-132754	Xenopus tropicalis	71.21	0.00e+00	999.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence