iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115306

Ensembl Protein ID

ENSSSCP00000026135.1

UniProt Accession

I3LPV8; I3LPV8_PIG

Genbank Protein ID

ENSSSCP00000026135

Protein Name

BRCA1-A complex subunit RAP80

Genbank Nucleotide ID

CU469199

Gene Name

UIMC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000022508.1	ENSSSCT00000029659.1	ENSSSCP00000026135.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	85.45	0.00e+00	1104.00	IUUC-Hsa-045760

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MPRRKKKGKE ASGAQNLEKK DAETASSVSV KKKRRIEDGF IVISDSDGEE PKEENGLQKT 60
KIKQSSRAKC LAKRKIAQMT EEEQFALALK MSEQEAREVN SQEEEEEELL RKAIAESLNS 120

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Nucleotide Sequence
(Fasta)

CCTCCCCGAG CGCGCGTCTC CTCTCGCCGT TCCTCTGCTT CGCGAGCGCA GGCTTCCCCG 60
CCCCCAGCTC CTGACGTGTT TCGGACGCTC GGGAACCGCT GTACCCGGGA GGAGGAGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003903--UIM_dom

PROSITE

PS50330--UIM

SMART

SM00726--UIM

Gene Ontology

GO:0070531--C:BRCA1-A complex
GO:0016604--C:nuclear body
GO:0042393--F:histone binding
GO:0070530--F:K63-linked polyubiquitin binding
GO:0006302--P:double-strand break repair
GO:0031572--P:G2 DNA damage checkpoint
GO:0070537--P:histone H2A K63-linked deubiquitination
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0045739--P:positive regulation of DNA repair
GO:0010212--P:response to ionizing radiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002335	Ailuropoda melanoleuca	86.58	0.00e+00	1095.00
IUUC-Apl-003971	Anas platyrhynchos	45.83	7.00e-99	354.00
IUUC-Aca-004239	Anolis carolinensis	40.56	1.00e-100	360.00
IUUC-Ang-009855	Aspergillus niger	36.67	9.60e-01	27.70
IUUC-Ame-011593	Astyanax mexicanus	61.40	2.00e-18	88.20
IUUC-Bta-012883	Bos taurus	88.26	0.00e+00	1246.00
IUUC-Cja-018904	Callithrix jacchus	83.52	0.00e+00	981.00
IUUC-Cfa-021279	Canis familiaris	88.43	0.00e+00	1206.00
IUUC-Cpo-021857	Cavia porcellus	82.23	0.00e+00	1107.00
IUUC-Csa-023278	Chlorocebus sabaeus	84.49	0.00e+00	1105.00
IUUC-Cho-025002	Choloepus hoffmanni	89.81	4.00e-126	444.00
IUUC-Dre-028822	Danio rerio	61.40	1.00e-20	94.70
IUUC-Dno-029930	Dasypus novemcinctus	83.64	0.00e+00	1089.00
IUUC-Dor-031008	Dipodomys ordii	73.38	5.00e-174	604.00
IUUC-Ete-032370	Echinops telfairi	74.51	0.00e+00	961.00
IUUC-Eca-033353	Equus caballus	88.35	0.00e+00	882.00
IUUC-Eeu-034724	Erinaceus europaeus	68.83	0.00e+00	796.00
IUUC-Fca-035721	Felis catus	87.52	0.00e+00	1186.00
IUUC-Fal-036888	Ficedula albicollis	42.38	2.00e-106	379.00
IUUC-Gga-040932	Gallus gallus	45.82	2.00e-65	244.00
IUUC-Ggo-045465	Gorilla gorilla	85.07	0.00e+00	1108.00
IUUC-Hsa-045760	Homo sapiens	85.47	0.00e+00	1118.00
IUUC-Itr-048407	Ictidomys tridecemlineatus	93.22	1.00e-174	605.00
IUUC-Lch-050225	Latimeria chalumnae	34.56	2.00e-81	296.00
IUUC-Loc-052879	Lepisosteus oculatus	30.35	5.00e-43	168.00
IUUC-Laf-053871	Loxodonta africana	82.42	0.00e+00	1063.00
IUUC-Mcc-055478	Macaca mulatta	84.87	0.00e+00	1107.00
IUUC-Meu-056617	Macropus eugenii	49.00	3.00e-127	448.00
IUUC-Mga-059771	Meleagris gallopavo	43.46	2.00e-92	333.00
IUUC-Mmr-061450	Microcebus murinus	85.31	0.00e+00	1116.00
IUUC-Mdo-061927	Monodelphis domestica	53.95	0.00e+00	630.00
IUUC-Mmu-063821	Mus musculus	76.23	0.00e+00	990.00
IUUC-Mpu-065921	Mustela putorius furo	87.96	0.00e+00	1071.00
IUUC-Mlu-067296	Myotis lucifugus	84.37	0.00e+00	1084.00
IUUC-Nle-069257	Nomascus leucogenys	85.29	0.00e+00	1106.00
IUUC-Opr-071016	Ochotona princeps	73.55	0.00e+00	934.00
IUUC-Ont-071282	Oreochromis niloticus	31.47	1.00e-19	91.30
IUUC-Ocu-074580	Oryctolagus cuniculus	84.82	0.00e+00	1127.00
IUUC-Olo-080293	Oryza longistaminata	27.78	2.70e-01	28.50
IUUC-Oga-088521	Otolemur garnettii	83.65	0.00e+00	1098.00
IUUC-Ptr-091227	Pan troglodytes	85.09	0.00e+00	1108.00
IUUC-Pan-092193	Papio anubis	80.35	0.00e+00	1082.00
IUUC-Pfo-096691	Poecilia formosa	48.84	5.00e-20	92.80
IUUC-Pab-098460	Pongo abelii	84.06	0.00e+00	1108.00
IUUC-Pca-100892	Procavia capensis	73.00	0.00e+00	971.00
IUUC-Pva-102816	Pteropus vampyrus	84.87	0.00e+00	1030.00
IUUC-Rno-105049	Rattus norvegicus	71.27	0.00e+00	932.00
IUUC-Sha-106502	Sarcophilus harrisii	53.93	6.00e-153	533.00
IUUC-Sar-113108	Sorex araneus	67.62	6.00e-150	523.00
IUUC-Tgu-116746	Taeniopygia guttata	44.48	2.00e-90	326.00
IUUC-Tsy-119018	Tarsius syrichta	62.09	1.00e-162	566.00
IUUC-Tbe-127389	Tupaia belangeri	84.86	0.00e+00	677.00
IUUC-Ttr-128880	Tursiops truncatus	86.12	2.00e-151	529.00
IUUC-Xtr-132854	Xenopus tropicalis	32.01	1.00e-66	247.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence