iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039862

Ensembl Protein ID

GGTG_12178T0

UniProt Accession

J3PF99; J3PF99_GAGT3

Genbank Protein ID

EJT70001.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

ADBI01001028

Gene Name

GGTG_12178

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_12178	GGTG_12178T0	GGTG_12178T0

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	31.52	1.00e-28	125.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gaeumannomyces graminis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAVDRDDFLH LSKPLAPSAV GFNANVAPLT VTIQPQAILS ILDHAVRRDN RDTQATRVIG 60
ALVGVRSEDG TEVEVRSTFA IPHTENEDQV EVDVEYQKNM LALTLKASPR EALLGWYTTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATATTTC GTGTGCAAAT TCGCACACCT TGGATGCGGG CGCAGCGAAT CGCCATAATA 60
ATATCAATTT GACGACCCCT CCCGATCCCG CCGAGCCAGC ACGTCCGACT CCGTGACGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	28.47	9.00e-24	102.00
IUUC-Aml-001527	Ailuropoda melanoleuca	31.54	1.00e-32	132.00
IUUC-Atr-002686	Amborella trichopoda	31.63	2.00e-24	104.00
IUUC-Apl-003977	Anas platyrhynchos	31.00	1.00e-29	121.00
IUUC-Aca-004335	Anolis carolinensis	31.05	5.00e-33	133.00
IUUC-Aly-005945	Arabidopsis lyrata	31.41	3.00e-27	114.00
IUUC-Ath-007045	Arabidopsis thaliana	30.69	8.00e-26	108.00
IUUC-Acl-008365	Aspergillus clavatus	61.89	9.00e-110	388.00
IUUC-Afl-008742	Aspergillus flavus	60.57	5.00e-103	365.00
IUUC-Afu-009030	Aspergillus fumigatus	61.89	4.00e-110	389.00
IUUC-Ani-009212	Aspergillus nidulans	60.88	5.00e-110	389.00
IUUC-Ang-009712	Aspergillus niger	62.30	3.00e-109	386.00
IUUC-Aor-009885	Aspergillus oryzae	60.25	9.00e-110	388.00
IUUC-Ate-010315	Aspergillus terreus	62.95	1.00e-103	367.00
IUUC-Ame-010801	Astyanax mexicanus	43.40	8.00e-15	72.40
IUUC-Bgr-011982	Blumeria graminis	63.87	2.00e-120	423.00
IUUC-Bta-012804	Bos taurus	31.29	4.00e-32	130.00
IUUC-Bci-013891	Botrytis cinerea	70.65	8.00e-123	431.00
IUUC-Bdi-014328	Brachypodium distachyon	29.15	2.00e-25	108.00
IUUC-Bol-015446	Brassica oleracea	32.51	1.00e-29	122.00
IUUC-Bra-016862	Brassica rapa	32.86	1.00e-29	121.00
IUUC-Cel-018171	Caenorhabditis elegans	26.62	1.00e-22	98.20
IUUC-Cja-019335	Callithrix jacchus	31.54	1.00e-32	132.00
IUUC-Cfa-020138	Canis familiaris	31.54	7.00e-33	132.00
IUUC-Cpo-022109	Cavia porcellus	31.12	1.00e-26	112.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	29.74	1.00e-30	125.00
IUUC-Csa-023994	Chlorocebus sabaeus	31.54	1.00e-32	132.00
IUUC-Cho-024351	Choloepus hoffmanni	25.09	4.00e-14	70.50
IUUC-Cin-025801	Ciona intestinalis	29.50	3.00e-34	137.00
IUUC-Csv-025805	Ciona savignyi	30.32	8.00e-34	135.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	75.24	2.00e-137	480.00
IUUC-Cne-026868	Cryptococcus neoformans	35.69	8.00e-38	149.00
IUUC-Cme-027328	Cyanidioschyzon merolae	25.40	2.00e-11	61.60
IUUC-Dre-028085	Danio rerio	30.71	1.00e-33	135.00
IUUC-Dno-030099	Dasypus novemcinctus	31.54	2.00e-32	131.00
IUUC-Dor-030324	Dipodomys ordii	27.60	1.00e-22	98.60
IUUC-Dse-031314	Dothistroma septosporum	57.94	6.00e-106	375.00
IUUC-Dme-031926	Drosophila melanogaster	25.44	2.00e-25	107.00
IUUC-Ete-032569	Echinops telfairi	28.88	6.00e-27	112.00
IUUC-Eca-033502	Equus caballus	31.73	3.00e-30	124.00
IUUC-Eeu-034883	Erinaceus europaeus	21.47	3.00e-08	50.10
IUUC-Fca-035873	Felis catus	31.54	1.00e-32	132.00
IUUC-Fal-036921	Ficedula albicollis	32.01	3.00e-35	140.00
IUUC-Fox-037765	Fusarium oxysporum	73.11	2.00e-130	456.00
IUUC-Fso-038240	Fusarium solani	74.19	3.00e-133	466.00
IUUC-Gmo-038864	Gadus morhua	31.25	3.00e-34	137.00
IUUC-Gga-040952	Gallus gallus	32.13	2.00e-35	140.00
IUUC-Gac-041677	Gasterosteus aculeatus	29.57	5.00e-34	136.00
IUUC-Gma-043061	Glycine max	29.89	1.00e-21	95.10
IUUC-Ggo-045591	Gorilla gorilla	31.54	1.00e-32	132.00
IUUC-Hsa-046860	Homo sapiens	31.54	1.00e-32	132.00
IUUC-Hvu-047410	Hordeum vulgare	30.68	2.00e-10	56.60
IUUC-Itr-048211	Ictidomys tridecemlineatus	31.54	6.00e-33	133.00
IUUC-Lch-049410	Latimeria chalumnae	37.86	4.00e-20	89.70
IUUC-Lpe-051102	Leersia perrieri	30.04	1.00e-24	105.00
IUUC-Loc-052016	Lepisosteus oculatus	27.14	5.00e-22	96.30
IUUC-Lma-053157	Leptosphaeria maculans	57.14	3.00e-107	379.00
IUUC-Laf-054568	Loxodonta africana	31.54	2.00e-32	131.00
IUUC-Mcc-054613	Macaca mulatta	31.54	1.00e-32	132.00
IUUC-Meu-056427	Macropus eugenii	30.43	3.00e-09	54.30
IUUC-Mor-057104	Magnaporthe oryzae	87.82	2.00e-166	576.00
IUUC-Mtr-058445	Medicago truncatula	29.75	1.00e-30	124.00
IUUC-Mla-059038	Melampsora laricipopulina	35.25	2.00e-39	154.00
IUUC-Mga-059548	Meleagris gallopavo	31.38	5.00e-31	125.00
IUUC-Mvi-060520	Microbotryum violaceum	37.84	8.00e-21	92.80
IUUC-Mmr-060577	Microcebus murinus	30.43	4.00e-09	53.90
IUUC-Mdo-062376	Monodelphis domestica	30.82	8.00e-33	132.00
IUUC-Mmu-063254	Mus musculus	31.54	2.00e-32	130.00
IUUC-Mac-065635	Musa acuminata	30.66	5.00e-28	116.00
IUUC-Mpu-066314	Mustela putorius furo	31.54	8.00e-33	132.00
IUUC-Mlu-067512	Myotis lucifugus	32.01	3.00e-33	134.00
IUUC-Nfi-068262	Neosartorya fischeri	61.56	1.00e-109	387.00
IUUC-Ncr-068872	Neurospora crassa	74.52	1.00e-129	454.00
IUUC-Nle-070118	Nomascus leucogenys	31.54	1.00e-32	132.00
IUUC-Opr-071228	Ochotona princeps	30.83	9.00e-29	118.00
IUUC-Ont-072600	Oreochromis niloticus	30.82	2.00e-33	134.00
IUUC-Oan-073584	Ornithorhynchus anatinus	31.38	2.00e-29	120.00
IUUC-Ocu-074542	Oryctolagus cuniculus	31.65	7.00e-33	132.00
IUUC-Oba-075923	Oryza barthii	29.75	3.00e-25	107.00
IUUC-Obr-076313	Oryza brachyantha	30.40	2.00e-25	107.00
IUUC-Ogl-076932	Oryza glaberrima	29.75	3.00e-25	107.00
IUUC-Ogu-078152	Oryza glumaepatula	29.75	3.00e-25	107.00
IUUC-Oin-079528	Oryza indica	29.75	3.00e-25	107.00
IUUC-Olo-080401	Oryza longistaminata	29.75	3.00e-25	107.00
IUUC-Ome-081553	Oryza meridionalis	29.75	2.00e-25	107.00
IUUC-Oni-082090	Oryza nivara	29.33	2.00e-25	107.00
IUUC-Opu-083583	Oryza punctata	30.40	4.00e-25	106.00
IUUC-Oru-084492	Oryza rufipogon	29.75	3.00e-25	107.00
IUUC-Osa-085383	Oryza sativa	29.75	3.00e-25	107.00
IUUC-Ola-086835	Oryzias latipes	31.25	1.00e-34	138.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.69	2.00e-19	87.80
IUUC-Oga-088886	Otolemur garnettii	31.65	6.00e-33	133.00
IUUC-Oar-090079	Ovis aries	31.29	2.00e-32	130.00
IUUC-Ptr-091457	Pan troglodytes	31.54	1.00e-32	132.00
IUUC-Pan-092317	Papio anubis	25.52	2.00e-12	64.30
IUUC-Psi-093129	Pelodiscus sinensis	30.77	6.00e-31	126.00
IUUC-Pma-094488	Petromyzon marinus	32.86	6.00e-34	135.00
IUUC-Pno-095049	Phaeosphaeria nodorum	59.61	3.00e-109	386.00
IUUC-Ppa-095341	Physcomitrella patens	31.05	1.00e-36	145.00
IUUC-Pfo-096286	Poecilia formosa	30.74	4.00e-34	136.00
IUUC-Pab-097765	Pongo abelii	31.54	1.00e-32	132.00
IUUC-Pop-099131	Populus trichocarpa	29.89	7.00e-28	115.00
IUUC-Pca-100524	Procavia capensis	24.37	8.00e-14	68.60
IUUC-Ppe-101934	Prunus persica	31.05	1.00e-33	135.00
IUUC-Pva-102577	Pteropus vampyrus	32.26	2.00e-33	134.00
IUUC-Pgr-103521	Puccinia graminis	31.95	5.00e-34	136.00
IUUC-Ptt-103773	Puccinia triticina	24.22	7.00e-07	46.60
IUUC-Pte-104304	Pyrenophora teres	59.02	5.00e-107	379.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	59.02	8.00e-107	378.00
IUUC-Rno-105717	Rattus norvegicus	31.54	1.00e-32	132.00
IUUC-Sha-107190	Sarcophilus harrisii	31.72	1.00e-31	129.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	44.41	2.00e-73	267.00
IUUC-Spo-108355	Schizosaccharomyces pombe	44.09	1.00e-73	268.00
IUUC-Smo-109374	Selaginella moellendorffii	31.86	1.00e-37	148.00
IUUC-Sit-110119	Setaria italica	29.60	4.00e-26	110.00
IUUC-Sly-111570	Solanum lycopersicum	30.94	4.00e-24	103.00
IUUC-Stu-112308	Solanum tuberosum	29.23	3.00e-27	113.00
IUUC-Sar-113515	Sorex araneus	52.17	7.00e-02	28.50
IUUC-Sbi-114605	Sorghum bicolor	28.88	1.00e-25	109.00
IUUC-Sre-114906	Sporisorium reilianum	41.10	5.00e-54	202.00
IUUC-Tgu-117087	Taeniopygia guttata	30.99	4.00e-30	122.00
IUUC-Tru-117700	Takifugu rubripes	32.40	5.00e-35	139.00
IUUC-Tni-120470	Tetraodon nigroviridis	32.26	6.00e-35	139.00
IUUC-Tca-121109	Theobroma cacao	32.08	1.00e-24	105.00
IUUC-Tre-122095	Trichoderma reesei	72.35	1.00e-128	451.00
IUUC-Tvi-122580	Trichoderma virens	72.67	2.00e-129	453.00
IUUC-Tae-125129	Triticum aestivum	29.20	4.00e-26	110.00
IUUC-Tur-126658	Triticum urartu	27.72	4.00e-20	90.10
IUUC-Tme-127043	Tuber melanosporum	55.19	1.00e-96	344.00
IUUC-Tbe-127927	Tupaia belangeri	31.54	1.00e-32	132.00
IUUC-Ttr-129231	Tursiops truncatus	31.54	8.00e-33	132.00
IUUC-Uma-129578	Ustilago maydis	41.10	5.00e-53	199.00
IUUC-Vda-129730	Verticillium dahliae	71.52	2.00e-136	476.00
IUUC-Vpa-130606	Vicugna pacos	31.52	5.00e-09	53.10
IUUC-Vvi-130968	Vitis vinifera	30.25	5.00e-28	116.00
IUUC-Xtr-132203	Xenopus tropicalis	30.47	4.00e-34	136.00
IUUC-Xma-133972	Xiphophorus maculatus	30.82	3.00e-34	137.00
IUUC-Yli-134553	Yarrowia lipolytica	42.62	1.00e-62	231.00
IUUC-Zma-134941	Zea mays	27.44	2.00e-20	91.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence