iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	28.46	2.00e-10	65.10	IUUC-Hsa-046932

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAQDSEKRFH QIMDKLFTPS KSQLPSSSTS SSVEQQSRGK KRQNPSSALA LVEPKIVLAT 60
IDRSSALKVP AGTSPSGLCR PWDRGDLMRR LATFKSMTWF AKPQVISAVN CARRGWVNDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATAAATATG AAGAGGACTA AACGACAGCA GATCCCGTCG TTTTCGTGTT GTTCCGTCAC 60
CGCCATCTAA ACACCACTCC TTCACCTGAG CCGCGGCGAA GAAGGTGGAA GCGAATCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012935--Znf_C3HC-like

Pfam

PF07967--zf-C3HC

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

ath:AT1G48950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002290	Ailuropoda melanoleuca	27.27	6.00e-10	58.20
IUUC-Atr-003126	Amborella trichopoda	40.48	1.00e-88	320.00
IUUC-Aca-004720	Anolis carolinensis	26.70	1.00e-13	70.90
IUUC-Bta-012342	Bos taurus	26.92	1.00e-11	63.90
IUUC-Bra-016709	Brassica rapa	38.06	4.00e-54	206.00
IUUC-Cja-019724	Callithrix jacchus	27.82	2.00e-10	59.70
IUUC-Cfa-020918	Canis familiaris	28.46	4.00e-12	65.50
IUUC-Cpo-022028	Cavia porcellus	29.23	4.00e-13	68.60
IUUC-Csa-023238	Chlorocebus sabaeus	36.36	3.00e-03	35.40
IUUC-Cho-024962	Choloepus hoffmanni	24.32	4.00e-11	62.00
IUUC-Csv-025870	Ciona savignyi	29.82	7.70e-01	28.10
IUUC-Dre-027658	Danio rerio	29.14	1.00e-14	74.30
IUUC-Dno-028891	Dasypus novemcinctus	27.17	2.00e-12	66.20
IUUC-Dse-031338	Dothistroma septosporum	25.20	3.00e-08	52.80
IUUC-Eca-033965	Equus caballus	29.01	2.00e-11	63.20
IUUC-Eeu-034997	Erinaceus europaeus	24.79	7.00e-07	48.10
IUUC-Fca-036112	Felis catus	28.46	7.00e-12	64.70
IUUC-Gmo-039188	Gadus morhua	27.14	1.00e-14	73.90
IUUC-Ggr-039778	Gaeumannomyces graminis	29.50	1.00e-07	50.80
IUUC-Gga-040879	Gallus gallus	25.26	6.00e-11	61.60
IUUC-Gac-041886	Gasterosteus aculeatus	26.39	3.00e-14	72.40
IUUC-Gma-043122	Glycine max	43.61	4.00e-127	447.00
IUUC-Ggo-045489	Gorilla gorilla	27.82	2.00e-10	60.10
IUUC-Hsa-046932	Homo sapiens	28.46	7.00e-12	64.70
IUUC-Itr-048776	Ictidomys tridecemlineatus	26.92	5.00e-10	58.50
IUUC-Lch-050627	Latimeria chalumnae	23.50	3.00e-09	55.80
IUUC-Loc-052294	Lepisosteus oculatus	23.95	1.00e-11	63.90
IUUC-Laf-053461	Loxodonta africana	27.27	4.00e-10	58.90
IUUC-Mcc-055411	Macaca mulatta	28.03	3.00e-09	56.20
IUUC-Meu-056049	Macropus eugenii	27.69	5.00e-12	65.10
IUUC-Mga-059941	Meleagris gallopavo	26.92	3.00e-08	52.40
IUUC-Mmr-061230	Microcebus murinus	26.72	2.00e-08	53.50
IUUC-Mdo-062254	Monodelphis domestica	35.85	1.00e-03	37.40
IUUC-Mmu-063183	Mus musculus	28.46	4.00e-12	65.50
IUUC-Mpu-066430	Mustela putorius furo	27.69	8.00e-12	64.30
IUUC-Mlu-067318	Myotis lucifugus	28.03	2.00e-10	60.10
IUUC-Nle-069871	Nomascus leucogenys	28.46	5.00e-12	65.10
IUUC-Opr-071023	Ochotona princeps	29.13	3.00e-10	59.30
IUUC-Ont-071854	Oreochromis niloticus	25.37	7.00e-15	74.70
IUUC-Ocu-074725	Oryctolagus cuniculus	26.98	6.00e-11	61.60
IUUC-Ogl-076943	Oryza glaberrima	46.60	6.00e-88	318.00
IUUC-Ogu-078596	Oryza glumaepatula	46.87	9.00e-88	317.00
IUUC-Ome-081625	Oryza meridionalis	47.07	9.00e-90	324.00
IUUC-Oru-084191	Oryza rufipogon	46.46	4.00e-89	322.00
IUUC-Osa-085482	Oryza sativa	46.46	6.00e-89	321.00
IUUC-Ola-086385	Oryzias latipes	26.11	1.00e-12	67.40
IUUC-Oga-089112	Otolemur garnettii	32.00	3.00e-01	29.30
IUUC-Oar-089630	Ovis aries	27.07	2.00e-10	59.70
IUUC-Ptr-091222	Pan troglodytes	28.46	4.00e-12	65.90
IUUC-Pan-092930	Papio anubis	27.82	2.00e-10	59.70
IUUC-Psi-093330	Pelodiscus sinensis	28.46	1.00e-11	63.90
IUUC-Ppa-095707	Physcomitrella patens	36.94	1.00e-66	247.00
IUUC-Pfo-096184	Poecilia formosa	28.50	3.00e-16	79.30
IUUC-Pab-097781	Pongo abelii	28.40	2.00e-06	46.60
IUUC-Pop-099933	Populus trichocarpa	41.58	2.00e-56	213.00
IUUC-Pca-101038	Procavia capensis	26.92	1.00e-10	60.10
IUUC-Pva-102707	Pteropus vampyrus	28.36	1.00e-12	67.40
IUUC-Pte-104254	Pyrenophora teres	26.79	8.20e-01	28.10
IUUC-Rno-105631	Rattus norvegicus	25.98	5.00e-11	62.00
IUUC-Sha-106923	Sarcophilus harrisii	27.27	2.00e-10	60.10
IUUC-Smo-109192	Selaginella moellendorffii	30.56	1.00e-58	220.00
IUUC-Sly-111755	Solanum lycopersicum	39.10	8.00e-57	214.00
IUUC-Sar-113436	Sorex araneus	25.38	9.00e-07	47.80
IUUC-Ssc-115977	Sus scrofa	38.18	8.00e-04	37.40
IUUC-Tni-120167	Tetraodon nigroviridis	26.15	3.00e-14	72.40
IUUC-Tbe-127998	Tupaia belangeri	35.19	3.40e-02	32.30
IUUC-Ttr-128617	Tursiops truncatus	26.92	3.00e-10	59.30
IUUC-Vda-129867	Verticillium dahliae	26.09	7.00e-08	51.60
IUUC-Xtr-132321	Xenopus tropicalis	22.83	2.00e-07	49.30
IUUC-Xma-133533	Xiphophorus maculatus	27.36	1.00e-15	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence