iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d045104	Zm00001d045104_T018	Zm00001d045104_T018
Zm00001d045104	Zm00001d045104_T002	Zm00001d045104_T002
Zm00001d045104	Zm00001d045104_T003	Zm00001d045104_T003
Zm00001d045104	Zm00001d045104_T005	Zm00001d045104_T005
Zm00001d045104	Zm00001d045104_T013	Zm00001d045104_T013

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.60e-82	279.5	91	393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           Gl+NlgNtCY+NSvLQcL+ +++++ +l + k++++++      +  + l++lq  ++  ++s+ k v+p +++k l+ +++ f++++q+
   Q: 91   GLENLGNTCYLNSVLQCLTYTEPFAAYLQSgKHTSSCRT-----SGFCALCALQIHVKTALESTGKIVTPFRIVKNLRCISRTFRNSRQE 175
           9*****************************667777765.....5679999*************************************** PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgke 180
           Da+E++  ll+++++ +                   s  + e++    ksl++++F+g+l+sq+kc +c + s++++pfldlsl++ + +
   Q: 176  DAHELMVNLLESMHKCC-----------------LPSGVSTESQSAYDKSLVHKIFGGRLRSQVKCTRCLHCSNKFDPFLDLSLEIAKAT 248
           *****************.................223345678888999****************************************9 PP
   S: 181  etkkeslqdcLesftkeeelegenk.yycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspe 269
                +l  +Le+ft+ e l++ +k y+ce+c++k+ a+k+l+++k P+vL++hLkRf  s   + reki+kkv+f   Ldl+pf+++++
   Q: 249  -----TLVRALENFTEDELLDEGQKeYECERCRQKVVAKKRLTIDKAPNVLTIHLKRF--SPF-NPREKIDKKVDFQSILDLKPFVSDSK 330
           .....9**************865555********************************..554.6789********************66 PP
   S: 270  ekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
            +   + kY+L++v+vH+G s++sGHY++yv+ ++g W ++dD++V++v+e++vl+   ++aY+lfY r
   Q: 331  GT---DFKYSLYGVLVHTGwSTQSGHYYCYVRTSSGMWHNLDDKEVRQVREADVLK---QKAYMLFYVR 393
           65...8**************************************************...********87 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAGVSMAAAP EGVLHRRIEF HLARRPHGSV AVGGGGFRME TLNPDAAGKV GPGEAVGSSE 60
GDARRPEKGD SGGIDPELSV ARIYLGRIGA GLENLGNTCY LNSVLQCLTY TEPFAAYLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAACGATC CAGATCGTCC TGTCGCCCTC GTCCTTCCAA TCCGGGTATA GGGTTTTTAG 60
CGCCGCCTCC CACCTCCAGG TCCCCCTCTC TTCCGCGGTT CCGCCATCGC GTCGCGAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

zma:103637980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000845	Aegilops tauschii	51.81	0.00e+00	735.00
IUUC-Aml-002092	Ailuropoda melanoleuca	46.20	3.00e-81	296.00
IUUC-Atr-003102	Amborella trichopoda	53.50	2.00e-143	503.00
IUUC-Apl-003459	Anas platyrhynchos	42.67	1.00e-71	265.00
IUUC-Aca-005360	Anolis carolinensis	47.15	1.00e-87	318.00
IUUC-Aly-006389	Arabidopsis lyrata	57.61	2.00e-139	489.00
IUUC-Ath-006710	Arabidopsis thaliana	51.49	2.00e-138	485.00
IUUC-Ago-007836	Ashbya gossypii	27.56	1.00e-31	130.00
IUUC-Ame-011358	Astyanax mexicanus	47.10	1.00e-86	314.00
IUUC-Bta-013047	Bos taurus	46.52	4.00e-87	316.00
IUUC-Bdi-014036	Brachypodium distachyon	56.30	0.00e+00	920.00
IUUC-Bol-015086	Brassica oleracea	58.33	4.00e-137	482.00
IUUC-Bra-018046	Brassica rapa	57.60	3.00e-135	475.00
IUUC-Cel-018186	Caenorhabditis elegans	33.64	6.00e-39	154.00
IUUC-Cja-019203	Callithrix jacchus	44.62	4.00e-84	306.00
IUUC-Cfa-020586	Canis familiaris	45.89	1.00e-80	294.00
IUUC-Cpo-021804	Cavia porcellus	36.63	2.00e-80	293.00
IUUC-Cre-022988	Chlamydomonas reinhardtii	47.11	2.00e-54	205.00
IUUC-Csa-023137	Chlorocebus sabaeus	44.94	7.00e-85	308.00
IUUC-Cho-024575	Choloepus hoffmanni	39.54	9.00e-57	215.00
IUUC-Cin-025230	Ciona intestinalis	47.70	4.00e-58	217.00
IUUC-Cne-027049	Cryptococcus neoformans	37.43	4.00e-41	162.00
IUUC-Cme-027339	Cyanidioschyzon merolae	39.38	6.00e-56	211.00
IUUC-Dre-028587	Danio rerio	41.25	4.00e-88	319.00
IUUC-Dno-029149	Dasypus novemcinctus	39.71	3.00e-81	296.00
IUUC-Dor-030836	Dipodomys ordii	34.24	3.00e-62	233.00
IUUC-Dme-032119	Drosophila melanogaster	35.96	3.00e-48	187.00
IUUC-Ete-033088	Echinops telfairi	41.18	2.00e-75	276.00
IUUC-Eca-033600	Equus caballus	46.20	4.00e-81	296.00
IUUC-Eeu-035019	Erinaceus europaeus	40.19	4.00e-60	224.00
IUUC-Fca-035792	Felis catus	44.48	7.00e-83	302.00
IUUC-Fal-036852	Ficedula albicollis	46.60	2.00e-79	290.00
IUUC-Gmo-039033	Gadus morhua	44.21	7.00e-85	308.00
IUUC-Gga-040664	Gallus gallus	46.20	1.00e-80	294.00
IUUC-Gac-042176	Gasterosteus aculeatus	43.30	4.00e-86	312.00
IUUC-Gma-043113	Glycine max	63.09	5.00e-140	491.00
IUUC-Ggo-045437	Gorilla gorilla	44.94	3.00e-79	290.00
IUUC-Hsa-046863	Homo sapiens	44.94	4.00e-79	289.00
IUUC-Hvu-047306	Hordeum vulgare	87.98	2.00e-140	491.00
IUUC-Itr-048655	Ictidomys tridecemlineatus	44.94	5.00e-84	305.00
IUUC-Lch-049867	Latimeria chalumnae	45.95	9.00e-86	311.00
IUUC-Lpe-051574	Leersia perrieri	57.93	0.00e+00	973.00
IUUC-Loc-052796	Lepisosteus oculatus	43.44	2.00e-82	300.00
IUUC-Laf-054243	Loxodonta africana	45.89	2.00e-80	293.00
IUUC-Mcc-055762	Macaca mulatta	44.94	1.00e-84	308.00
IUUC-Meu-056697	Macropus eugenii	42.42	5.00e-81	295.00
IUUC-Mtr-058537	Medicago truncatula	63.35	3.00e-140	492.00
IUUC-Mla-059049	Melampsora laricipopulina	38.15	7.00e-51	194.00
IUUC-Mga-059501	Meleagris gallopavo	41.55	8.00e-72	265.00
IUUC-Mvi-060547	Microbotryum violaceum	40.82	2.00e-67	249.00
IUUC-Mmr-060966	Microcebus murinus	45.89	5.00e-81	295.00
IUUC-Mdo-062733	Monodelphis domestica	42.59	3.00e-81	296.00
IUUC-Mmu-064331	Mus musculus	41.08	6.00e-81	295.00
IUUC-Mac-064815	Musa acuminata	57.64	3.00e-162	564.00
IUUC-Mpu-065759	Mustela putorius furo	46.20	4.00e-81	296.00
IUUC-Mlu-067371	Myotis lucifugus	42.68	2.00e-82	300.00
IUUC-Nle-069004	Nomascus leucogenys	44.48	6.00e-84	305.00
IUUC-Opr-070729	Ochotona princeps	39.24	2.00e-70	260.00
IUUC-Ont-071346	Oreochromis niloticus	44.38	7.00e-87	315.00
IUUC-Oan-072931	Ornithorhynchus anatinus	45.89	1.00e-86	314.00
IUUC-Ocu-074596	Oryctolagus cuniculus	44.63	3.00e-83	302.00
IUUC-Oba-075866	Oryza barthii	58.67	0.00e+00	971.00
IUUC-Obr-076408	Oryza brachyantha	58.44	0.00e+00	979.00
IUUC-Ogl-077239	Oryza glaberrima	58.78	0.00e+00	975.00
IUUC-Ogu-078064	Oryza glumaepatula	58.67	0.00e+00	984.00
IUUC-Oin-079157	Oryza indica	58.46	0.00e+00	971.00
IUUC-Olo-080633	Oryza longistaminata	52.98	0.00e+00	672.00
IUUC-Ome-081746	Oryza meridionalis	56.74	0.00e+00	944.00
IUUC-Oni-082339	Oryza nivara	58.46	0.00e+00	969.00
IUUC-Opu-083194	Oryza punctata	59.11	0.00e+00	969.00
IUUC-Oru-085083	Oryza rufipogon	58.57	0.00e+00	967.00
IUUC-Osa-086180	Oryza sativa	58.37	0.00e+00	965.00
IUUC-Ola-087255	Oryzias latipes	41.67	6.00e-86	311.00
IUUC-Olu-087773	Ostreococcus lucimarinus	47.96	1.00e-75	275.00
IUUC-Oga-088818	Otolemur garnettii	37.92	5.00e-82	298.00
IUUC-Oar-089410	Ovis aries	46.35	6.00e-87	315.00
IUUC-Ptr-090680	Pan troglodytes	44.94	3.00e-79	289.00
IUUC-Pan-092482	Papio anubis	44.94	1.00e-84	307.00
IUUC-Psi-093277	Pelodiscus sinensis	45.93	7.00e-84	305.00
IUUC-Ppa-095853	Physcomitrella patens	61.44	2.00e-120	426.00
IUUC-Pfo-096807	Poecilia formosa	40.59	1.00e-87	318.00
IUUC-Pab-098724	Pongo abelii	44.94	9.00e-85	308.00
IUUC-Pop-099693	Populus trichocarpa	47.30	1.00e-144	506.00
IUUC-Pca-100117	Procavia capensis	36.91	5.00e-35	142.00
IUUC-Ppe-101678	Prunus persica	63.41	8.00e-147	514.00
IUUC-Pva-103238	Pteropus vampyrus	38.31	2.00e-68	254.00
IUUC-Pgr-103270	Puccinia graminis	38.49	2.00e-56	213.00
IUUC-Ptt-103887	Puccinia triticina	38.05	8.00e-56	211.00
IUUC-Rno-105340	Rattus norvegicus	43.17	8.00e-80	291.00
IUUC-Sha-107019	Sarcophilus harrisii	42.32	2.00e-81	296.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	40.62	5.00e-59	221.00
IUUC-Spo-108119	Schizosaccharomyces pombe	43.81	5.00e-65	241.00
IUUC-Smo-108727	Selaginella moellendorffii	56.41	4.00e-100	357.00
IUUC-Sit-109895	Setaria italica	72.55	0.00e+00	1252.00
IUUC-Sly-111722	Solanum lycopersicum	64.49	2.00e-143	503.00
IUUC-Stu-112912	Solanum tuberosum	64.75	2.00e-144	506.00
IUUC-Sar-113340	Sorex araneus	44.48	7.00e-84	305.00
IUUC-Sbi-114477	Sorghum bicolor	84.36	0.00e+00	1520.00
IUUC-Sre-114924	Sporisorium reilianum	35.51	2.00e-58	220.00
IUUC-Ssc-116022	Sus scrofa	45.32	3.00e-82	299.00
IUUC-Tgu-116976	Taeniopygia guttata	41.79	2.00e-78	285.00
IUUC-Tru-118391	Takifugu rubripes	45.89	4.00e-87	316.00
IUUC-Tsy-118974	Tarsius syrichta	43.50	2.00e-83	303.00
IUUC-Tni-120064	Tetraodon nigroviridis	44.38	7.00e-87	315.00
IUUC-Tca-120936	Theobroma cacao	63.52	6.00e-151	528.00
IUUC-Tae-124495	Triticum aestivum	57.83	0.00e+00	981.00
IUUC-Tur-126861	Triticum urartu	51.40	0.00e+00	726.00
IUUC-Tbe-127377	Tupaia belangeri	32.47	4.00e-49	189.00
IUUC-Ttr-129259	Tursiops truncatus	40.69	8.00e-65	241.00
IUUC-Uma-129416	Ustilago maydis	39.62	1.00e-59	224.00
IUUC-Vvi-131130	Vitis vinifera	63.38	3.00e-158	551.00
IUUC-Xtr-132544	Xenopus tropicalis	44.05	8.00e-83	300.00
IUUC-Xma-133735	Xiphophorus maculatus	41.82	2.00e-87	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence