iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052529

Ensembl Protein ID

ENSLOCP00000022467.1

UniProt Accession

W5NPA8; W5NPA8_LEPOC

Genbank Protein ID

ENSLOCP00000022467

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01024285

Gene Name

RNF182 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000018366.1	ENSLOCT00000022508.1	ENSLOCP00000022467.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	31.3	24	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++++    + p+vl+C H  +a+Cl+k+++  +ss   ++CP Cr
   Q: 24   CKICYNRYdarARKPKVLSCLHRVCAKCLKKMVDVGDSSPSIISCPFCR 72
           99******888555***************999999999**********8 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MSRNPDPEGE SSQPLVYTLE ELECKICYNR YDARARKPKV LSCLHRVCAK CLKKMVDVGD 60
SSPSIISCPF CRHETHVPDE EIWLLQDDSN ILAILTYQDR ARKSGAAGTP GEVVLTPNSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCGGA ACCCCGACCC GGAGGGCGAG AGCTCCCAGC CGCTGGTCTA CACCCTGGAG 60
GAGCTGGAGT GCAAGATCTG CTACAACCGC TACGACGCGC GAGCGCGCAA GCCCAAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF14634--zf-RING_5

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011943	Astyanax mexicanus	80.78	3.00e-118	417.00
IUUC-Dre-027368	Danio rerio	81.50	4.00e-119	420.00
IUUC-Fal-036940	Ficedula albicollis	53.28	2.00e-69	255.00
IUUC-Gmo-038766	Gadus morhua	68.63	8.00e-41	158.00
IUUC-Gac-042290	Gasterosteus aculeatus	80.43	8.00e-43	165.00
IUUC-Meu-056310	Macropus eugenii	40.35	5.00e-40	156.00
IUUC-Ont-072215	Oreochromis niloticus	70.33	3.00e-74	271.00
IUUC-Ola-087248	Oryzias latipes	67.23	1.00e-83	302.00
IUUC-Pfo-096824	Poecilia formosa	68.62	2.00e-76	278.00
IUUC-Pva-102313	Pteropus vampyrus	49.58	6.00e-49	187.00
IUUC-Tgu-116792	Taeniopygia guttata	54.55	3.00e-60	224.00
IUUC-Tni-120158	Tetraodon nigroviridis	59.57	9.00e-53	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence