iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130966

Ensembl Protein ID

VIT_12s0057g00630.t01

UniProt Accession

A5ASG6; A5ASG6_VITVI

Genbank Protein ID

CAN71610.1; CCB51720.1

Protein Name

Chlorophyll a-b binding protein, chloroplastic

Genbank Nucleotide ID

AM433852; FN595759

Gene Name

VIT_12s0057g00630; VITISV_000630

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0057g00630	VIT_12s0057g00630.t01	VIT_12s0057g00630.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	32.69	1.40e+00	31.20	IUUC-Hsa-046409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.

Protein Sequence
(Fasta)

MATSAIQRSA FAGQTALKQP NELVRKVGGL GGGRITMRRT VKSTPQSIWY GPDRPKYLGP 60
FSEQTPSYLT GEFPGDYGWD TAGLSADPET FAKNRELEVI HCRWAMLGAL GCVFPEILSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTTGCAAC TTTAGAGCAA AACCTCATCA ACAAAGAAGA TTAGCTGAGT ATCATGGCAA 60
CTTCTGCAAT CCAGAGATCA GCATTCGCCG GCCAGACCGC CTTGAAGCAG CCCAATGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0148--Chlorophyll
KW-0150--Chloroplast
KW-0157--Chromophore
KW-0181--Complete proteome
KW-0472--Membrane
KW-0602--Photosynthesis
KW-0603--Photosystem I
KW-0604--Photosystem II
KW-0934--Plastid
KW-1185--Reference proteome
KW-0793--Thylakoid
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001344--Chloro_AB-bd_pln
IPR022796--Chloroa_b-bind
IPR023329--Chlorophyll_a/b-bd_dom

Pfam

PF00504--Chloroa_b-bind

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0009535--C:chloroplast thylakoid membrane
GO:0016021--C:integral component of membrane
GO:0009522--C:photosystem I
GO:0009523--C:photosystem II
GO:0010287--C:plastoglobule
GO:0016168--F:chlorophyll binding
GO:0031409--F:pigment binding
GO:0009768--P:photosynthesis, light harvesting in photosystem I
GO:0018298--P:protein-chromophore linkage
GO:0009416--P:response to light stimulus

KEGG

vvi:100254533

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001911	Ailuropoda melanoleuca	32.69	1.10e-01	30.80
IUUC-Apl-004035	Anas platyrhynchos	32.69	1.40e-01	30.40
IUUC-Aca-004782	Anolis carolinensis	32.69	1.40e-01	30.40
IUUC-Ame-011790	Astyanax mexicanus	32.69	9.50e-02	30.80
IUUC-Bta-012579	Bos taurus	32.69	6.70e-02	31.20
IUUC-Bci-013718	Botrytis cinerea	48.39	8.70e-01	29.30
IUUC-Cja-019528	Callithrix jacchus	32.69	9.80e-02	30.80
IUUC-Cfa-020678	Canis familiaris	32.69	9.40e-02	30.80
IUUC-Cpo-021947	Cavia porcellus	32.69	1.10e-01	30.80
IUUC-Csa-023935	Chlorocebus sabaeus	32.69	1.10e-01	30.80
IUUC-Cho-024477	Choloepus hoffmanni	32.69	8.70e-02	31.20
IUUC-Dre-027636	Danio rerio	32.69	8.80e-02	30.80
IUUC-Dno-029048	Dasypus novemcinctus	32.69	1.10e-01	30.80
IUUC-Dor-030401	Dipodomys ordii	32.69	1.00e-01	30.80
IUUC-Eca-033825	Equus caballus	32.69	1.10e-01	30.80
IUUC-Fca-036253	Felis catus	32.69	1.30e-01	30.40
IUUC-Fal-037614	Ficedula albicollis	32.69	1.30e-01	30.40
IUUC-Gmo-038928	Gadus morhua	30.77	6.10e-01	28.10
IUUC-Gga-040177	Gallus gallus	32.69	1.60e-01	30.00
IUUC-Gac-042263	Gasterosteus aculeatus	32.69	1.50e-01	30.40
IUUC-Ggo-045288	Gorilla gorilla	32.69	9.60e-02	30.80
IUUC-Hsa-046409	Homo sapiens	32.69	9.90e-02	30.80
IUUC-Itr-048996	Ictidomys tridecemlineatus	32.69	1.20e-01	30.40
IUUC-Loc-052319	Lepisosteus oculatus	32.69	9.50e-02	30.80
IUUC-Laf-054070	Loxodonta africana	32.69	1.10e-01	30.80
IUUC-Mcc-055339	Macaca mulatta	34.62	1.90e-02	33.10
IUUC-Meu-055917	Macropus eugenii	32.69	1.30e-01	30.40
IUUC-Mga-059273	Meleagris gallopavo	32.69	1.60e-01	30.00
IUUC-Mmr-061597	Microcebus murinus	32.69	1.10e-01	30.80
IUUC-Mmu-063374	Mus musculus	32.69	8.60e-02	31.20
IUUC-Mpu-065967	Mustela putorius furo	32.69	1.10e-01	30.80
IUUC-Mlu-067532	Myotis lucifugus	32.69	1.10e-01	30.80
IUUC-Nle-069373	Nomascus leucogenys	32.69	9.80e-02	30.80
IUUC-Opr-070873	Ochotona princeps	32.69	1.20e-01	30.80
IUUC-Ont-072498	Oreochromis niloticus	32.69	7.40e-02	31.20
IUUC-Ocu-073870	Oryctolagus cuniculus	32.69	1.00e-01	30.80
IUUC-Ola-086866	Oryzias latipes	32.69	4.80e-02	30.40
IUUC-Oga-089057	Otolemur garnettii	32.69	1.10e-01	30.80
IUUC-Oar-090013	Ovis aries	32.69	6.50e-02	30.80
IUUC-Ptr-091054	Pan troglodytes	32.69	1.00e-01	30.80
IUUC-Ppa-095577	Physcomitrella patens	41.20	7.00e-32	129.00
IUUC-Pfo-097179	Poecilia formosa	32.69	6.80e-02	31.20
IUUC-Pab-097702	Pongo abelii	32.69	9.80e-02	30.80
IUUC-Pca-100671	Procavia capensis	32.69	8.70e-02	31.20
IUUC-Rno-106044	Rattus norvegicus	32.69	8.40e-02	31.20
IUUC-Ssl-108665	Sclerotinia sclerotiorum	48.39	7.20e-01	29.30
IUUC-Smo-108823	Selaginella moellendorffii	87.70	3.00e-132	463.00
IUUC-Sbi-114200	Sorghum bicolor	35.68	2.00e-28	118.00
IUUC-Ssc-115343	Sus scrofa	32.69	9.90e-02	30.80
IUUC-Tgu-117061	Taeniopygia guttata	32.69	1.40e-01	30.40
IUUC-Tni-119829	Tetraodon nigroviridis	32.69	6.60e-02	31.60
IUUC-Ttr-129148	Tursiops truncatus	32.69	8.70e-02	31.20
IUUC-Vpa-130780	Vicugna pacos	32.69	1.10e-01	30.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence