iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-116918

Ensembl Protein ID

ENSTGUP00000006568.1

UniProt Accession

H0Z7L8; H0Z7L8_TAEGU

Genbank Protein ID

ENSTGUP00000006568

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01039754

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000006372.1	ENSTGUT00000006634.1	ENSTGUP00000006568.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-19	69.3	183	220
ULD/UDP/UBQ/UBQ_PIM	3.30e-27	94.1	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 183  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 220
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++++++++tv++lKeki++e+g   +p++ qkLIyaGkiL+D+t L+e++i+++++v+++v+k+k
   Q: 1    MQITLKTLQQQTFRIDIDPEETVKALKEKIESERGkdaFPVAGQKLIYAGKILNDETALKEYKIDEKNFVVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MQITLKTLQQ QTFRIDIDPE ETVKALKEKI ESERGKDAFP VAGQKLIYAG KILNDETALK 60
EYKIDEKNFV VVMVTKPKAA AGVTQPSNAT STVGSTTAAP TAVAAPIPVP APVPAPVPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTCCCCG CCGCCTCTTC CCGGGGAAGG GACGAGGGCG GCCGGAGCGC TGCACGTACC 60
CGCCGCCATG CAGATCACGC TGAAGACGCT GCAGCAGCAA ACCTTCCGCA TCGACATCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

KEGG

tgu:100219390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000126	Aegilops tauschii	40.16	1.00e-20	93.60
IUUC-Aml-001195	Ailuropoda melanoleuca	82.07	4.00e-86	311.00
IUUC-Atr-003116	Amborella trichopoda	37.74	4.00e-35	141.00
IUUC-Apl-003371	Anas platyrhynchos	86.53	6.00e-141	493.00
IUUC-Aca-004599	Anolis carolinensis	78.89	2.00e-82	299.00
IUUC-Aly-006159	Arabidopsis lyrata	38.93	2.00e-41	162.00
IUUC-Ath-006676	Arabidopsis thaliana	39.20	7.00e-42	164.00
IUUC-Ago-007830	Ashbya gossypii	63.27	4.00e-13	68.60
IUUC-Acl-008212	Aspergillus clavatus	47.79	6.00e-21	94.70
IUUC-Afl-008605	Aspergillus flavus	45.52	2.00e-19	90.10
IUUC-Afu-008877	Aspergillus fumigatus	47.06	2.00e-20	93.20
IUUC-Ani-009460	Aspergillus nidulans	47.79	2.00e-21	96.30
IUUC-Aor-010032	Aspergillus oryzae	45.52	3.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	39.44	6.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	64.61	1.00e-54	206.00
IUUC-Bgr-012056	Blumeria graminis	43.04	7.00e-15	74.30
IUUC-Bta-012922	Bos taurus	84.32	1.00e-84	306.00
IUUC-Bci-013933	Botrytis cinerea	49.26	2.00e-20	92.80
IUUC-Bdi-014452	Brachypodium distachyon	34.39	4.00e-35	141.00
IUUC-Bol-015272	Brassica oleracea	41.18	4.00e-38	151.00
IUUC-Bra-016970	Brassica rapa	41.53	2.00e-41	162.00
IUUC-Cel-018364	Caenorhabditis elegans	35.43	2.00e-19	89.40
IUUC-Cja-019431	Callithrix jacchus	71.73	6.00e-66	244.00
IUUC-Cfa-020683	Canis familiaris	81.67	4.00e-86	311.00
IUUC-Cpo-022145	Cavia porcellus	79.71	6.00e-92	330.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.21	3.00e-30	125.00
IUUC-Csa-023714	Chlorocebus sabaeus	81.52	5.00e-93	333.00
IUUC-Cho-024814	Choloepus hoffmanni	71.24	4.00e-68	251.00
IUUC-Cin-025741	Ciona intestinalis	42.86	3.00e-39	155.00
IUUC-Csv-025823	Ciona savignyi	64.86	2.00e-24	105.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	48.00	1.00e-15	77.00
IUUC-Cne-027056	Cryptococcus neoformans	48.72	8.00e-16	77.80
IUUC-Cme-027260	Cyanidioschyzon merolae	25.29	1.00e-24	107.00
IUUC-Dre-028369	Danio rerio	67.06	8.00e-80	290.00
IUUC-Dno-029543	Dasypus novemcinctus	84.39	3.00e-85	308.00
IUUC-Dor-030358	Dipodomys ordii	62.23	2.00e-65	242.00
IUUC-Dse-031336	Dothistroma septosporum	50.38	4.00e-19	88.60
IUUC-Dme-032027	Drosophila melanogaster	38.15	3.00e-65	241.00
IUUC-Ete-032583	Echinops telfairi	71.73	3.00e-59	221.00
IUUC-Eca-034243	Equus caballus	84.32	4.00e-84	304.00
IUUC-Eeu-034721	Erinaceus europaeus	80.65	1.00e-67	249.00
IUUC-Fca-036051	Felis catus	64.78	7.00e-66	243.00
IUUC-Fal-037148	Ficedula albicollis	96.88	5.00e-150	523.00
IUUC-Fox-037960	Fusarium oxysporum	43.38	8.00e-16	77.80
IUUC-Fso-038107	Fusarium solani	51.32	1.00e-16	80.50
IUUC-Gmo-039080	Gadus morhua	58.17	6.00e-60	223.00
IUUC-Ggr-040116	Gaeumannomyces graminis	45.59	9.00e-17	80.50
IUUC-Gga-040544	Gallus gallus	87.24	2.00e-137	481.00
IUUC-Gac-042239	Gasterosteus aculeatus	57.25	1.00e-95	342.00
IUUC-Gma-043743	Glycine max	37.05	5.00e-40	158.00
IUUC-Ggo-045125	Gorilla gorilla	83.33	2.00e-91	328.00
IUUC-Hsa-046519	Homo sapiens	83.33	2.00e-91	328.00
IUUC-Hvu-047832	Hordeum vulgare	37.08	1.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	83.12	1.00e-78	286.00
IUUC-Kpa-049314	Komagataella pastoris	36.44	2.00e-30	125.00
IUUC-Lch-050563	Latimeria chalumnae	57.53	8.00e-54	203.00
IUUC-Lpe-051087	Leersia perrieri	36.47	9.00e-36	144.00
IUUC-Loc-051758	Lepisosteus oculatus	64.15	6.00e-61	227.00
IUUC-Laf-054293	Loxodonta africana	83.97	3.00e-84	304.00
IUUC-Mcc-055600	Macaca mulatta	83.33	5.00e-91	327.00
IUUC-Meu-056459	Macropus eugenii	64.35	2.00e-67	248.00
IUUC-Mor-057287	Magnaporthe oryzae	51.28	4.00e-17	82.00
IUUC-Mpo-057609	Magnaporthe poae	45.80	3.00e-16	78.60
IUUC-Mtr-058239	Medicago truncatula	31.82	2.00e-51	195.00
IUUC-Mla-058961	Melampsora laricipopulina	45.93	1.00e-24	107.00
IUUC-Mga-060060	Meleagris gallopavo	49.23	3.00e-32	131.00
IUUC-Mvi-060220	Microbotryum violaceum	44.44	2.00e-21	96.70
IUUC-Mmr-061159	Microcebus murinus	84.36	4.00e-88	317.00
IUUC-Mdo-061967	Monodelphis domestica	82.01	9.00e-83	300.00
IUUC-Mmu-063258	Mus musculus	82.10	6.00e-92	330.00
IUUC-Mac-064724	Musa acuminata	38.49	2.00e-43	169.00
IUUC-Mpu-066389	Mustela putorius furo	82.07	3.00e-86	311.00
IUUC-Mlu-067999	Myotis lucifugus	83.47	2.00e-84	305.00
IUUC-Nfi-068390	Neosartorya fischeri	47.06	2.00e-20	93.20
IUUC-Ncr-068685	Neurospora crassa	44.12	6.00e-25	107.00
IUUC-Nle-069655	Nomascus leucogenys	83.33	1.00e-91	329.00
IUUC-Opr-070234	Ochotona princeps	96.43	5.00e-26	111.00
IUUC-Ont-072484	Oreochromis niloticus	57.21	7.00e-102	363.00
IUUC-Oan-073572	Ornithorhynchus anatinus	64.78	5.00e-62	231.00
IUUC-Ocu-074831	Oryctolagus cuniculus	82.70	5.00e-82	297.00
IUUC-Oba-075392	Oryza barthii	36.33	1.00e-34	140.00
IUUC-Obr-076909	Oryza brachyantha	38.34	5.00e-39	154.00
IUUC-Ogl-077021	Oryza glaberrima	36.33	2.00e-34	139.00
IUUC-Ogu-078883	Oryza glumaepatula	36.33	1.00e-34	140.00
IUUC-Oin-079817	Oryza indica	36.33	2.00e-34	139.00
IUUC-Olo-080929	Oryza longistaminata	36.33	9.00e-35	140.00
IUUC-Ome-081866	Oryza meridionalis	36.33	8.00e-35	140.00
IUUC-Oni-083092	Oryza nivara	36.33	2.00e-34	139.00
IUUC-Opu-083756	Oryza punctata	36.33	9.00e-35	140.00
IUUC-Oru-084816	Oryza rufipogon	36.33	2.00e-34	139.00
IUUC-Osa-086112	Oryza sativa	36.33	2.00e-34	139.00
IUUC-Ola-086540	Oryzias latipes	61.79	3.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	43.86	3.00e-42	165.00
IUUC-Oga-088023	Otolemur garnettii	82.43	3.00e-84	305.00
IUUC-Oar-090387	Ovis aries	64.63	2.00e-64	238.00
IUUC-Ptr-091165	Pan troglodytes	83.33	3.00e-91	328.00
IUUC-Pan-092009	Papio anubis	82.35	5.00e-90	324.00
IUUC-Psi-093477	Pelodiscus sinensis	80.54	7.00e-80	290.00
IUUC-Pno-095064	Phaeosphaeria nodorum	47.37	9.00e-15	73.90
IUUC-Ppa-095654	Physcomitrella patens	37.45	9.00e-37	147.00
IUUC-Pfo-097385	Poecilia formosa	63.45	3.00e-72	265.00
IUUC-Pab-097868	Pongo abelii	83.33	1.00e-90	326.00
IUUC-Pop-099642	Populus trichocarpa	38.22	2.00e-41	162.00
IUUC-Pca-100652	Procavia capensis	78.71	1.00e-60	226.00
IUUC-Ppe-101830	Prunus persica	43.26	4.00e-30	125.00
IUUC-Pva-102412	Pteropus vampyrus	64.78	7.00e-67	247.00
IUUC-Pgr-103618	Puccinia graminis	36.16	2.00e-26	112.00
IUUC-Ptt-103717	Puccinia triticina	47.48	1.00e-28	120.00
IUUC-Pte-104303	Pyrenophora teres	47.89	3.00e-20	92.40
IUUC-Pyt-104580	Pyrenophora triticirepentis	48.23	5.00e-20	91.30
IUUC-Rno-104844	Rattus norvegicus	82.42	3.00e-92	331.00
IUUC-Sce-106214	Saccharomyces cerevisiae	37.31	2.00e-15	76.60
IUUC-Sha-107073	Sarcophilus harrisii	82.01	5.00e-83	300.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.24	3.00e-38	152.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.18	3.00e-39	155.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.86	6.00e-18	84.30
IUUC-Smo-109518	Selaginella moellendorffii	36.33	2.00e-28	119.00
IUUC-Sit-110694	Setaria italica	35.29	3.00e-20	92.80
IUUC-Sly-111480	Solanum lycopersicum	41.20	2.00e-45	176.00
IUUC-Stu-112054	Solanum tuberosum	40.71	4.00e-43	168.00
IUUC-Sar-112925	Sorex araneus	74.10	5.00e-76	277.00
IUUC-Sbi-114459	Sorghum bicolor	34.25	8.00e-36	144.00
IUUC-Sre-114894	Sporisorium reilianum	55.93	3.00e-12	66.20
IUUC-Ssc-115460	Sus scrofa	65.22	1.00e-65	243.00
IUUC-Tru-118651	Takifugu rubripes	62.66	2.00e-73	268.00
IUUC-Tsy-118836	Tarsius syrichta	87.68	4.00e-47	181.00
IUUC-Tni-120493	Tetraodon nigroviridis	61.80	2.00e-70	259.00
IUUC-Tca-121594	Theobroma cacao	37.69	4.00e-40	158.00
IUUC-Tre-121911	Trichoderma reesei	44.12	3.00e-16	79.00
IUUC-Tvi-122617	Trichoderma virens	48.72	2.00e-17	82.80
IUUC-Tae-125620	Triticum aestivum	36.69	8.00e-37	147.00
IUUC-Tur-126101	Triticum urartu	40.16	1.00e-20	93.60
IUUC-Tme-127092	Tuber melanosporum	49.30	1.00e-21	97.10
IUUC-Tbe-127493	Tupaia belangeri	67.93	5.00e-56	211.00
IUUC-Ttr-128464	Tursiops truncatus	84.32	4.00e-84	304.00
IUUC-Uma-129484	Ustilago maydis	48.28	2.00e-11	63.20
IUUC-Vda-129946	Verticillium dahliae	46.32	9.00e-18	84.00
IUUC-Vpa-130357	Vicugna pacos	77.89	8.00e-55	206.00
IUUC-Vvi-130842	Vitis vinifera	36.76	6.00e-40	157.00
IUUC-Xtr-132679	Xenopus tropicalis	73.83	2.00e-66	245.00
IUUC-Xma-133503	Xiphophorus maculatus	62.08	5.00e-72	264.00
IUUC-Yli-134615	Yarrowia lipolytica	41.12	9.00e-37	147.00
IUUC-Zma-135678	Zea mays	37.15	3.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence