iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-086961

Ensembl Protein ID

ENSORLP00000021515.1

UniProt Accession

H2MRY1; H2MRY1_ORYLA

Genbank Protein ID

ENSORLP00000021515

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04060786

Gene Name

chd5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000017190.1	ENSORLT00000021516.1	ENSORLP00000021515.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-16	60.8	230	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C+
   Q: 230  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCD 274
           79*********....9******************.*******7.******7 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

EPKSSGQLMH EWGLEDVQYG FTEDDYKTIT NYKAFSQFLR PLIAKKNPKI PMSKMMTVLG 60
AKWREFSANN PFKGASATAV AAAVAAAVET VTVAQPTPVS CSQPTAQQGP LKKAKTKEGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACCCAAAT CCTCCGGCCA GCTGATGCAT GAATGGGGTC TTGAAGATGT TCAGTACGGC 60
TTCACAGAGG ACGACTATAA AACCATCACC AACTACAAGG CTTTCAGCCA GTTCCTGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	75.00	0.00e+00	2263.00
IUUC-Apl-003406	Anas platyrhynchos	78.38	0.00e+00	1759.00
IUUC-Aca-004671	Anolis carolinensis	73.38	0.00e+00	2271.00
IUUC-Ame-011883	Astyanax mexicanus	80.56	0.00e+00	2552.00
IUUC-Bta-012868	Bos taurus	66.81	0.00e+00	2279.00
IUUC-Cja-018871	Callithrix jacchus	77.93	0.00e+00	1970.00
IUUC-Cfa-021063	Canis familiaris	75.79	0.00e+00	2286.00
IUUC-Cpo-022083	Cavia porcellus	76.10	0.00e+00	2251.00
IUUC-Csa-023084	Chlorocebus sabaeus	74.35	0.00e+00	2441.00
IUUC-Cme-027109	Cyanidioschyzon merolae	37.76	8.00e-83	301.00
IUUC-Dre-028226	Danio rerio	82.10	0.00e+00	2499.00
IUUC-Dor-030167	Dipodomys ordii	72.98	0.00e+00	1896.00
IUUC-Eca-034372	Equus caballus	76.29	0.00e+00	2261.00
IUUC-Eeu-034777	Erinaceus europaeus	68.48	0.00e+00	1716.00
IUUC-Fca-036048	Felis catus	75.08	0.00e+00	2276.00
IUUC-Fal-037282	Ficedula albicollis	75.33	0.00e+00	2291.00
IUUC-Gmo-038957	Gadus morhua	71.03	0.00e+00	1598.00
IUUC-Ggo-044514	Gorilla gorilla	74.24	0.00e+00	2438.00
IUUC-Hsa-046181	Homo sapiens	74.35	0.00e+00	2434.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	68.11	0.00e+00	2280.00
IUUC-Loc-052795	Lepisosteus oculatus	80.21	0.00e+00	2708.00
IUUC-Mcc-055856	Macaca mulatta	74.08	0.00e+00	2434.00
IUUC-Meu-056292	Macropus eugenii	62.30	0.00e+00	891.00
IUUC-Mga-059630	Meleagris gallopavo	75.83	0.00e+00	2325.00
IUUC-Mdo-062971	Monodelphis domestica	74.58	0.00e+00	1847.00
IUUC-Mmu-063644	Mus musculus	74.24	0.00e+00	2434.00
IUUC-Mpu-065809	Mustela putorius furo	68.84	0.00e+00	2163.00
IUUC-Mlu-067355	Myotis lucifugus	66.98	0.00e+00	2278.00
IUUC-Nle-069824	Nomascus leucogenys	73.38	0.00e+00	2254.00
IUUC-Opr-070960	Ochotona princeps	66.88	0.00e+00	2251.00
IUUC-Ont-072647	Oreochromis niloticus	86.65	0.00e+00	2835.00
IUUC-Oan-072885	Ornithorhynchus anatinus	64.73	0.00e+00	1796.00
IUUC-Ocu-074438	Oryctolagus cuniculus	64.62	0.00e+00	2144.00
IUUC-Oga-088775	Otolemur garnettii	76.10	0.00e+00	2327.00
IUUC-Oar-089784	Ovis aries	66.42	0.00e+00	2265.00
IUUC-Ptr-090586	Pan troglodytes	75.68	0.00e+00	2295.00
IUUC-Pan-092282	Papio anubis	74.79	0.00e+00	2411.00
IUUC-Psi-093007	Pelodiscus sinensis	80.49	0.00e+00	1867.00
IUUC-Pfo-096802	Poecilia formosa	84.26	0.00e+00	2516.00
IUUC-Rno-105378	Rattus norvegicus	73.69	0.00e+00	2426.00
IUUC-Sha-107233	Sarcophilus harrisii	74.34	0.00e+00	1899.00
IUUC-Ssc-116303	Sus scrofa	75.55	0.00e+00	2068.00
IUUC-Tgu-116779	Taeniopygia guttata	73.17	0.00e+00	2115.00
IUUC-Tru-117597	Takifugu rubripes	82.10	0.00e+00	2690.00
IUUC-Ttr-128301	Tursiops truncatus	74.47	0.00e+00	2433.00
IUUC-Xtr-132668	Xenopus tropicalis	74.68	0.00e+00	2251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence