iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-102065

Ensembl Protein ID

EMJ20077

UniProt Accession

M5X1W8; M5X1W8_PRUPE

Genbank Protein ID

EMJ20077.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KB638974

Gene Name

RDO4; PRUPE_ppa001226mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa001226mg	EMJ20077	EMJ20077

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	56.41	0.00e+00	882.00	IUUC-Ath-007462
E3 activity/RING/RING	24.48	2.00e-14	78.60	IUUC-Cel-018659
E3 activity/RING/RING	32.14	9.00e-29	126.00	IUUC-Dme-032034
E3 activity/RING/RING	29.39	1.00e-30	132.00	IUUC-Rno-105165
E3 activity/RING/RING	23.57	2.00e-12	69.70	IUUC-Sce-106384
E3 activity/RING/RING	44.62	4.00e-13	71.60	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Prunus persica

Protein Sequence
(Fasta)

MGSTGEHDRK RRHFSSLSPT AATAKKQPFL PISEDKKLDI AVLQYQNQKL LQKLETQKVE 60
YSGLENKFSQ MKDKQKPYDT TLSVVNKSWE EVVNDLESCS IHSRESSCQH DVKDKSIMDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGCA CAGGTGAGCA TGATCGAAAA CGCCGTCACT TTAGCTCCCT ATCACCCACG 60
GCTGCTACTG CTAAGAAGCA GCCCTTTTTG CCCATTTCTG AGGACAAAAA GGTGAGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005739--C:mitochondrion
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051301--P:cell division
GO:0016049--P:cell growth
GO:0009817--P:defense response to fungus, incompatible interaction
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0009965--P:leaf morphogenesis
GO:0010389--P:regulation of G2/M transition of mitotic cell cycle
GO:0010162--P:seed dormancy process
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

pper:PRUPE_ppa001226mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000994	Aegilops tauschii	39.60	1.00e-148	519.00
IUUC-Aml-002295	Ailuropoda melanoleuca	30.58	3.00e-39	156.00
IUUC-Atr-002836	Amborella trichopoda	55.06	0.00e+00	871.00
IUUC-Apl-003407	Anas platyrhynchos	29.48	7.00e-33	135.00
IUUC-Aca-004850	Anolis carolinensis	28.37	2.00e-34	140.00
IUUC-Aly-006055	Arabidopsis lyrata	55.73	0.00e+00	908.00
IUUC-Ath-007462	Arabidopsis thaliana	55.96	0.00e+00	907.00
IUUC-Ago-007988	Ashbya gossypii	36.36	1.00e-11	63.90
IUUC-Acl-008319	Aspergillus clavatus	44.23	1.00e-10	60.80
IUUC-Ani-009488	Aspergillus nidulans	39.22	1.00e-06	47.00
IUUC-Ang-009601	Aspergillus niger	41.38	3.00e-11	62.80
IUUC-Aor-010142	Aspergillus oryzae	41.38	5.00e-11	62.40
IUUC-Ate-010547	Aspergillus terreus	41.38	3.00e-11	62.80
IUUC-Ame-011745	Astyanax mexicanus	28.93	5.00e-37	149.00
IUUC-Bgr-012245	Blumeria graminis	27.54	6.00e-11	62.00
IUUC-Bta-013173	Bos taurus	30.19	1.00e-38	154.00
IUUC-Bci-013926	Botrytis cinerea	41.38	1.00e-10	61.20
IUUC-Bdi-014799	Brachypodium distachyon	47.80	0.00e+00	703.00
IUUC-Bol-015858	Brassica oleracea	55.43	0.00e+00	926.00
IUUC-Bra-016804	Brassica rapa	54.53	0.00e+00	932.00
IUUC-Cel-018659	Caenorhabditis elegans	27.87	1.00e-21	97.80
IUUC-Cja-019042	Callithrix jacchus	30.03	9.00e-38	151.00
IUUC-Cfa-020318	Canis familiaris	30.58	3.00e-39	156.00
IUUC-Cpo-021539	Cavia porcellus	30.68	3.00e-38	152.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	38.03	3.00e-11	62.80
IUUC-Csa-024051	Chlorocebus sabaeus	30.30	3.00e-39	156.00
IUUC-Cho-024616	Choloepus hoffmanni	30.28	2.00e-26	114.00
IUUC-Cin-025174	Ciona intestinalis	32.51	2.00e-33	137.00
IUUC-Csv-025830	Ciona savignyi	34.04	8.00e-31	128.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	46.15	2.00e-10	60.50
IUUC-Cne-026878	Cryptococcus neoformans	46.15	1.00e-12	68.20
IUUC-Cme-027134	Cyanidioschyzon merolae	43.33	4.00e-14	72.40
IUUC-Dre-028171	Danio rerio	28.10	7.00e-35	142.00
IUUC-Dno-028892	Dasypus novemcinctus	30.58	2.00e-39	157.00
IUUC-Dor-030268	Dipodomys ordii	30.75	6.00e-39	155.00
IUUC-Dse-031300	Dothistroma septosporum	42.59	1.00e-12	67.80
IUUC-Dme-032034	Drosophila melanogaster	28.27	2.00e-34	140.00
IUUC-Ete-033164	Echinops telfairi	28.37	6.00e-32	132.00
IUUC-Eca-033436	Equus caballus	30.58	3.00e-39	156.00
IUUC-Eeu-034801	Erinaceus europaeus	38.46	2.00e-16	80.50
IUUC-Fca-035720	Felis catus	30.30	2.00e-39	157.00
IUUC-Fal-037622	Ficedula albicollis	29.48	1.00e-29	124.00
IUUC-Fox-038017	Fusarium oxysporum	42.11	2.00e-10	60.10
IUUC-Fso-038414	Fusarium solani	46.15	1.00e-11	63.90
IUUC-Gmo-039446	Gadus morhua	28.45	3.00e-30	126.00
IUUC-Ggr-040117	Gaeumannomyces graminis	25.98	5.00e-11	62.40
IUUC-Gga-040412	Gallus gallus	29.48	6.00e-33	135.00
IUUC-Gac-041303	Gasterosteus aculeatus	29.29	5.00e-37	149.00
IUUC-Gma-042797	Glycine max	66.59	0.00e+00	1122.00
IUUC-Ggo-045426	Gorilla gorilla	30.30	4.00e-39	155.00
IUUC-Hsa-045732	Homo sapiens	30.30	4.00e-39	155.00
IUUC-Hvu-047689	Hordeum vulgare	47.14	0.00e+00	726.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	30.58	3.00e-39	156.00
IUUC-Kpa-049345	Komagataella pastoris	38.71	4.00e-12	65.90
IUUC-Lch-049429	Latimeria chalumnae	29.75	3.00e-37	149.00
IUUC-Lpe-051253	Leersia perrieri	45.65	0.00e+00	679.00
IUUC-Loc-052847	Lepisosteus oculatus	37.90	2.00e-22	98.60
IUUC-Lma-053312	Leptosphaeria maculans	37.50	5.00e-12	65.90
IUUC-Laf-054267	Loxodonta africana	30.58	3.00e-39	156.00
IUUC-Mcc-055240	Macaca mulatta	30.30	3.00e-39	156.00
IUUC-Meu-056750	Macropus eugenii	30.40	5.00e-37	149.00
IUUC-Mor-057068	Magnaporthe oryzae	32.99	9.00e-13	68.20
IUUC-Mpo-057568	Magnaporthe poae	37.93	6.00e-11	62.00
IUUC-Mtr-057632	Medicago truncatula	64.46	0.00e+00	1116.00
IUUC-Mla-059072	Melampsora laricipopulina	23.37	4.00e-18	86.30
IUUC-Mga-059731	Meleagris gallopavo	29.48	5.00e-33	135.00
IUUC-Mvi-060341	Microbotryum violaceum	37.10	1.00e-16	81.30
IUUC-Mmr-061177	Microcebus murinus	30.30	4.00e-39	155.00
IUUC-Mdo-062415	Monodelphis domestica	29.83	2.00e-39	157.00
IUUC-Mmu-063981	Mus musculus	30.58	3.00e-39	156.00
IUUC-Mac-065103	Musa acuminata	53.00	0.00e+00	885.00
IUUC-Mpu-066498	Mustela putorius furo	30.30	1.00e-39	157.00
IUUC-Mlu-067242	Myotis lucifugus	30.58	3.00e-39	156.00
IUUC-Ncr-068695	Neurospora crassa	34.48	7.00e-10	58.50
IUUC-Nle-069058	Nomascus leucogenys	28.29	1.00e-30	127.00
IUUC-Opr-071149	Ochotona princeps	38.24	1.00e-18	87.80
IUUC-Ont-071299	Oreochromis niloticus	29.55	5.00e-37	149.00
IUUC-Oan-072996	Ornithorhynchus anatinus	28.37	3.00e-33	135.00
IUUC-Ocu-073799	Oryctolagus cuniculus	30.58	2.00e-39	157.00
IUUC-Oba-075000	Oryza barthii	46.25	0.00e+00	692.00
IUUC-Obr-076532	Oryza brachyantha	48.36	0.00e+00	724.00
IUUC-Ogl-077200	Oryza glaberrima	48.36	0.00e+00	737.00
IUUC-Ogu-078279	Oryza glumaepatula	49.37	1.00e-163	569.00
IUUC-Oin-079097	Oryza indica	48.36	0.00e+00	736.00
IUUC-Olo-080447	Oryza longistaminata	43.82	3.00e-172	598.00
IUUC-Ome-081304	Oryza meridionalis	47.84	0.00e+00	732.00
IUUC-Oni-082162	Oryza nivara	44.15	0.00e+00	642.00
IUUC-Opu-083812	Oryza punctata	46.73	0.00e+00	629.00
IUUC-Oru-084382	Oryza rufipogon	44.15	0.00e+00	642.00
IUUC-Osa-085839	Oryza sativa	37.59	5.00e-96	344.00
IUUC-Ola-086435	Oryzias latipes	29.55	2.00e-37	150.00
IUUC-Olu-087683	Ostreococcus lucimarinus	37.61	1.00e-17	81.30
IUUC-Oga-089016	Otolemur garnettii	30.30	3.00e-39	156.00
IUUC-Oar-089589	Ovis aries	30.03	6.00e-39	155.00
IUUC-Ptr-091602	Pan troglodytes	28.29	1.00e-30	127.00
IUUC-Pan-092502	Papio anubis	30.30	3.00e-39	156.00
IUUC-Psi-093554	Pelodiscus sinensis	28.37	1.00e-29	124.00
IUUC-Pno-095079	Phaeosphaeria nodorum	39.68	3.00e-13	69.70
IUUC-Ppa-095651	Physcomitrella patens	36.74	1.00e-146	513.00
IUUC-Pfo-097527	Poecilia formosa	28.84	2.00e-28	120.00
IUUC-Pab-098619	Pongo abelii	30.30	4.00e-39	155.00
IUUC-Pop-099376	Populus trichocarpa	69.40	0.00e+00	1180.00
IUUC-Pca-100544	Procavia capensis	30.58	3.00e-39	156.00
IUUC-Pva-102479	Pteropus vampyrus	30.30	3.00e-39	156.00
IUUC-Pgr-103536	Puccinia graminis	41.94	4.00e-18	85.90
IUUC-Ptt-103845	Puccinia triticina	29.13	6.00e-07	48.90
IUUC-Pte-104415	Pyrenophora teres	41.07	9.00e-13	68.20
IUUC-Pyt-104762	Pyrenophora triticirepentis	41.07	9.00e-13	68.20
IUUC-Rno-105165	Rattus norvegicus	30.30	2.00e-39	157.00
IUUC-Sce-106384	Saccharomyces cerevisiae	23.57	2.00e-16	80.50
IUUC-Sha-107602	Sarcophilus harrisii	29.83	2.00e-39	157.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	50.00	3.00e-13	69.30
IUUC-Spo-108304	Schizosaccharomyces pombe	29.86	3.00e-14	72.80
IUUC-Ssl-108546	Sclerotinia sclerotiorum	41.38	2.00e-10	60.50
IUUC-Smo-109550	Selaginella moellendorffii	39.71	1.00e-159	556.00
IUUC-Sit-109889	Setaria italica	46.59	0.00e+00	745.00
IUUC-Sly-111490	Solanum lycopersicum	61.33	0.00e+00	943.00
IUUC-Sar-113349	Sorex araneus	35.48	1.00e-18	87.80
IUUC-Sbi-114734	Sorghum bicolor	46.75	8.00e-64	235.00
IUUC-Sre-115087	Sporisorium reilianum	32.76	2.00e-15	76.60
IUUC-Ssc-116134	Sus scrofa	30.85	1.00e-37	151.00
IUUC-Tgu-116549	Taeniopygia guttata	29.48	2.00e-29	123.00
IUUC-Tru-117867	Takifugu rubripes	29.26	5.00e-37	149.00
IUUC-Tsy-118808	Tarsius syrichta	27.43	8.00e-27	114.00
IUUC-Tni-120802	Tetraodon nigroviridis	29.55	3.00e-37	149.00
IUUC-Tca-121060	Theobroma cacao	72.81	0.00e+00	1250.00
IUUC-Tre-122150	Trichoderma reesei	43.10	1.00e-10	61.20
IUUC-Tvi-122431	Trichoderma virens	43.10	4.00e-11	62.40
IUUC-Tae-125415	Triticum aestivum	47.80	0.00e+00	753.00
IUUC-Tur-126786	Triticum urartu	42.97	0.00e+00	626.00
IUUC-Tme-127177	Tuber melanosporum	26.30	4.00e-13	69.30
IUUC-Tbe-127597	Tupaia belangeri	30.59	2.00e-35	144.00
IUUC-Ttr-128303	Tursiops truncatus	30.30	2.00e-37	150.00
IUUC-Uma-129488	Ustilago maydis	41.07	3.00e-15	76.60
IUUC-Vda-129815	Verticillium dahliae	26.03	3.00e-10	59.70
IUUC-Vpa-130237	Vicugna pacos	28.10	2.00e-31	130.00
IUUC-Vvi-131316	Vitis vinifera	71.10	0.00e+00	1187.00
IUUC-Xtr-132906	Xenopus tropicalis	28.38	2.00e-36	147.00
IUUC-Xma-133607	Xiphophorus maculatus	29.55	3.00e-36	146.00
IUUC-Yli-134445	Yarrowia lipolytica	36.51	3.00e-11	63.20
IUUC-Zma-135805	Zea mays	46.37	0.00e+00	711.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence