iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.20e-11	43.0	700	780

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlk.....v..npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksg 75
           qv v+++d se++l+     v    s+++a+LK k+++++g+pp++q++ y+G  ++d +t a y+l +g+t+hl +k++g
   Q: 700  QVLVPNSDKSEWKLNgqmiaVtmALSEPIANLKTKLQDETGMPPAKQKIFYEGMFFKDSNTMAFYNLVNGTTVHLQVKERG 780
           677777777777777776442557889************************************************999987 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MATLDAEANE EQFGNDQPKS MSGPIIGIIY PPPEVRNIVD KTASFVARNG PEFEARIRQN 60
ELGNPKFNFL NGGDPYHAYY RHKVNEFREG NDAGITALAS MKQLAVTSAA QQRQQELLKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCTTCCA CCTCTAATTT TCGGCTAAAC AAGCGTTTTC TCATTTCTCA AAAAGCAATC 60
AGATTTTATC AATAAAAGAG GACGATTTCA CCAGCCATGG CAACTTTAGA CGCGGAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005634--C:nucleus
GO:0071011--C:precatalytic spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0007067--P:mitotic nuclear division
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000398--P:mRNA splicing, via spliceosome
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
GO:0007283--P:spermatogenesis

KEGG

dme:Dmel_CG16941

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	35.75	2.00e-44	173.00
IUUC-Aml-002416	Ailuropoda melanoleuca	69.63	4.00e-100	358.00
IUUC-Atr-003001	Amborella trichopoda	46.67	2.00e-58	219.00
IUUC-Apl-003584	Anas platyrhynchos	69.89	3.00e-85	308.00
IUUC-Aca-004690	Anolis carolinensis	71.00	9.00e-94	337.00
IUUC-Aly-005487	Arabidopsis lyrata	38.26	4.00e-69	255.00
IUUC-Ath-007275	Arabidopsis thaliana	37.55	2.00e-71	263.00
IUUC-Acl-008320	Aspergillus clavatus	40.43	5.00e-41	161.00
IUUC-Afl-008707	Aspergillus flavus	41.01	5.00e-47	181.00
IUUC-Afu-008786	Aspergillus fumigatus	41.73	4.00e-42	164.00
IUUC-Ani-009307	Aspergillus nidulans	42.07	1.00e-46	180.00
IUUC-Ang-009761	Aspergillus niger	41.30	5.00e-48	184.00
IUUC-Aor-010067	Aspergillus oryzae	41.01	5.00e-47	181.00
IUUC-Ate-010515	Aspergillus terreus	41.67	6.00e-49	187.00
IUUC-Ame-011842	Astyanax mexicanus	70.63	4.00e-100	358.00
IUUC-Bgr-012204	Blumeria graminis	33.33	1.00e-56	213.00
IUUC-Bta-013525	Bos taurus	69.63	7.00e-100	357.00
IUUC-Bci-013842	Botrytis cinerea	40.68	1.00e-41	163.00
IUUC-Bdi-014436	Brachypodium distachyon	35.94	9.00e-63	234.00
IUUC-Bol-015903	Brassica oleracea	36.77	1.00e-63	237.00
IUUC-Bra-017856	Brassica rapa	36.65	2.00e-56	213.00
IUUC-Cel-018261	Caenorhabditis elegans	48.70	6.00e-70	258.00
IUUC-Cja-018989	Callithrix jacchus	69.63	7.00e-100	357.00
IUUC-Cfa-020629	Canis familiaris	69.63	8.00e-100	357.00
IUUC-Cpo-021759	Cavia porcellus	69.63	6.00e-99	354.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	36.54	2.00e-19	89.40
IUUC-Csa-023750	Chlorocebus sabaeus	69.63	4.00e-100	358.00
IUUC-Cho-024581	Choloepus hoffmanni	69.35	2.00e-78	286.00
IUUC-Cin-025640	Ciona intestinalis	61.31	5.00e-91	328.00
IUUC-Csv-025855	Ciona savignyi	58.70	6.00e-90	324.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	41.13	9.00e-40	157.00
IUUC-Cne-026952	Cryptococcus neoformans	38.04	6.00e-41	161.00
IUUC-Dre-028055	Danio rerio	71.00	8.00e-90	324.00
IUUC-Dno-029259	Dasypus novemcinctus	69.63	5.00e-100	358.00
IUUC-Dor-031081	Dipodomys ordii	69.00	7.00e-100	357.00
IUUC-Dse-031438	Dothistroma septosporum	40.43	4.00e-44	172.00
IUUC-Ete-033177	Echinops telfairi	70.26	1.00e-100	359.00
IUUC-Eca-033670	Equus caballus	69.63	5.00e-100	358.00
IUUC-Eeu-035100	Erinaceus europaeus	63.14	5.00e-74	271.00
IUUC-Fca-036176	Felis catus	69.63	8.00e-100	357.00
IUUC-Fal-036776	Ficedula albicollis	69.52	1.00e-83	303.00
IUUC-Fox-037706	Fusarium oxysporum	38.02	1.00e-40	159.00
IUUC-Fso-038313	Fusarium solani	37.07	1.00e-37	150.00
IUUC-Gmo-038887	Gadus morhua	69.52	4.00e-94	338.00
IUUC-Ggr-039932	Gaeumannomyces graminis	30.74	8.00e-42	164.00
IUUC-Gga-041184	Gallus gallus	69.89	2.00e-85	309.00
IUUC-Gac-042118	Gasterosteus aculeatus	59.09	2.00e-143	502.00
IUUC-Gma-043607	Glycine max	37.52	5.00e-76	278.00
IUUC-Ggo-045641	Gorilla gorilla	69.63	5.00e-100	358.00
IUUC-Hsa-045751	Homo sapiens	69.63	5.00e-100	358.00
IUUC-Hvu-047702	Hordeum vulgare	32.25	3.00e-25	109.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	69.63	3.00e-100	358.00
IUUC-Kpa-049400	Komagataella pastoris	30.14	7.00e-27	114.00
IUUC-Lch-050152	Latimeria chalumnae	68.77	5.00e-91	328.00
IUUC-Lpe-051570	Leersia perrieri	44.72	3.00e-30	125.00
IUUC-Loc-051753	Lepisosteus oculatus	68.38	9.00e-100	357.00
IUUC-Lma-053219	Leptosphaeria maculans	37.30	5.00e-34	138.00
IUUC-Laf-053643	Loxodonta africana	70.00	2.00e-100	358.00
IUUC-Mcc-055091	Macaca mulatta	69.63	4.00e-100	358.00
IUUC-Meu-056036	Macropus eugenii	64.81	5.00e-88	318.00
IUUC-Mor-057214	Magnaporthe oryzae	34.67	2.00e-32	132.00
IUUC-Mpo-057385	Magnaporthe poae	26.73	2.00e-16	78.60
IUUC-Mtr-057954	Medicago truncatula	36.89	7.00e-72	264.00
IUUC-Mla-059020	Melampsora laricipopulina	34.04	2.00e-42	166.00
IUUC-Mga-060176	Meleagris gallopavo	69.89	2.00e-85	309.00
IUUC-Mvi-060278	Microbotryum violaceum	33.88	2.00e-69	256.00
IUUC-Mmr-061602	Microcebus murinus	60.23	3.00e-154	538.00
IUUC-Mdo-062047	Monodelphis domestica	69.63	1.00e-99	357.00
IUUC-Mmu-063377	Mus musculus	69.63	3.00e-100	358.00
IUUC-Mac-065503	Musa acuminata	43.69	1.00e-53	204.00
IUUC-Mpu-066047	Mustela putorius furo	69.63	4.00e-100	358.00
IUUC-Mlu-067039	Myotis lucifugus	69.63	5.00e-100	358.00
IUUC-Nfi-068434	Neosartorya fischeri	42.86	9.00e-47	180.00
IUUC-Ncr-068912	Neurospora crassa	35.74	1.00e-34	140.00
IUUC-Nle-069540	Nomascus leucogenys	69.63	4.00e-100	358.00
IUUC-Opr-071157	Ochotona princeps	69.63	3.00e-93	335.00
IUUC-Ont-072229	Oreochromis niloticus	69.14	3.00e-94	338.00
IUUC-Oan-073616	Ornithorhynchus anatinus	64.38	1.00e-18	85.50
IUUC-Ocu-074002	Oryctolagus cuniculus	69.63	5.00e-100	357.00
IUUC-Oba-075659	Oryza barthii	31.71	9.00e-30	124.00
IUUC-Obr-076465	Oryza brachyantha	36.46	9.00e-47	181.00
IUUC-Ogl-077461	Oryza glaberrima	35.43	4.00e-48	185.00
IUUC-Ogu-078515	Oryza glumaepatula	35.26	1.00e-48	187.00
IUUC-Oin-080201	Oryza indica	35.46	5.00e-45	175.00
IUUC-Olo-080751	Oryza longistaminata	31.71	1.00e-29	123.00
IUUC-Ome-081201	Oryza meridionalis	34.17	2.00e-63	236.00
IUUC-Oni-082951	Oryza nivara	35.46	5.00e-45	175.00
IUUC-Opu-083560	Oryza punctata	35.54	3.00e-49	189.00
IUUC-Oru-084440	Oryza rufipogon	35.43	4.00e-48	185.00
IUUC-Osa-085699	Oryza sativa	35.43	4.00e-48	185.00
IUUC-Ola-086705	Oryzias latipes	68.91	2.00e-93	336.00
IUUC-Olu-087794	Ostreococcus lucimarinus	44.36	3.00e-49	189.00
IUUC-Oga-088896	Otolemur garnettii	69.63	4.00e-100	358.00
IUUC-Oar-090155	Ovis aries	69.63	6.00e-100	357.00
IUUC-Ptr-090754	Pan troglodytes	69.63	5.00e-100	358.00
IUUC-Pan-092464	Papio anubis	69.63	4.00e-100	358.00
IUUC-Psi-093166	Pelodiscus sinensis	70.26	2.00e-85	309.00
IUUC-Pma-094280	Petromyzon marinus	66.67	3.00e-96	344.00
IUUC-Pno-095106	Phaeosphaeria nodorum	36.07	6.00e-26	111.00
IUUC-Ppa-095459	Physcomitrella patens	46.49	6.00e-58	218.00
IUUC-Pfo-096212	Poecilia formosa	56.69	9.00e-65	241.00
IUUC-Pab-098482	Pongo abelii	69.63	4.00e-100	358.00
IUUC-Pop-098977	Populus trichocarpa	46.38	9.00e-49	187.00
IUUC-Pca-100776	Procavia capensis	54.24	4.00e-36	145.00
IUUC-Ppe-101595	Prunus persica	37.40	1.00e-68	253.00
IUUC-Pva-102981	Pteropus vampyrus	68.77	8.00e-91	327.00
IUUC-Pgr-103503	Puccinia graminis	31.05	7.00e-62	231.00
IUUC-Ptt-103994	Puccinia triticina	30.22	2.00e-57	216.00
IUUC-Pte-104226	Pyrenophora teres	34.44	1.00e-32	133.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	29.39	2.00e-41	162.00
IUUC-Rno-105225	Rattus norvegicus	69.63	3.00e-100	358.00
IUUC-Sha-107353	Sarcophilus harrisii	69.63	3.00e-99	355.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	35.42	2.00e-59	222.00
IUUC-Spo-108266	Schizosaccharomyces pombe	33.61	3.00e-59	221.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	40.98	6.00e-46	177.00
IUUC-Smo-108952	Selaginella moellendorffii	44.09	5.00e-46	178.00
IUUC-Sit-110019	Setaria italica	36.64	2.00e-45	176.00
IUUC-Sly-111621	Solanum lycopersicum	47.06	1.00e-57	217.00
IUUC-Stu-112703	Solanum tuberosum	46.62	1.00e-58	221.00
IUUC-Sar-113166	Sorex araneus	60.22	2.00e-77	283.00
IUUC-Sbi-114746	Sorghum bicolor	36.00	3.00e-45	176.00
IUUC-Sre-115196	Sporisorium reilianum	29.43	1.00e-46	180.00
IUUC-Ssc-115573	Sus scrofa	69.63	7.00e-100	357.00
IUUC-Tgu-117284	Taeniopygia guttata	70.26	2.00e-85	309.00
IUUC-Tru-118236	Takifugu rubripes	57.33	3.00e-144	504.00
IUUC-Tsy-119219	Tarsius syrichta	64.81	7.00e-90	324.00
IUUC-Tni-119929	Tetraodon nigroviridis	63.00	3.00e-76	278.00
IUUC-Tca-121156	Theobroma cacao	45.91	2.00e-55	210.00
IUUC-Tre-122179	Trichoderma reesei	31.33	8.00e-44	170.00
IUUC-Tvi-122326	Trichoderma virens	40.53	3.00e-41	162.00
IUUC-Tae-124313	Triticum aestivum	35.89	6.00e-62	231.00
IUUC-Tur-126352	Triticum urartu	36.20	4.00e-45	175.00
IUUC-Tme-126996	Tuber melanosporum	39.71	2.00e-44	172.00
IUUC-Tbe-127271	Tupaia belangeri	64.81	1.00e-89	323.00
IUUC-Ttr-128433	Tursiops truncatus	69.74	7.00e-100	357.00
IUUC-Uma-129357	Ustilago maydis	29.51	9.00e-46	177.00
IUUC-Vda-130010	Verticillium dahliae	30.29	3.00e-46	178.00
IUUC-Vvi-131734	Vitis vinifera	48.18	3.00e-60	226.00
IUUC-Xtr-132013	Xenopus tropicalis	67.29	2.00e-99	355.00
IUUC-Xma-134244	Xiphophorus maculatus	67.42	3.00e-91	328.00
IUUC-Yli-134579	Yarrowia lipolytica	36.11	3.00e-30	125.00
IUUC-Zma-135716	Zea mays	35.17	3.00e-46	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence