iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049672

Ensembl Protein ID

ENSLACP00000018081.2

UniProt Accession

H3B860; H3B860_LATCH

Genbank Protein ID

ENSLACP00000018081

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01078032

Gene Name

FBXO48

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000015931.2	ENSLACT00000018212.2	ENSLACP00000018081.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	9.80e-06	25.9	32	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 100  aglldrlpeeilveilklldkeellraarvcrrwq.elasqkalwktv 146
            + ++ lp e+ v+i+++ld ++l++a+ +c++w+  + +++ lwk+ 
   Q: 32   LNFVELLPPEVTVKIFNYLDIKSLCNASVTCKTWNsLIEESDYLWKNH 79
           5667889****************************5555578899875 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MQKNFKRPKQ NINFIPGQAP VLSGLGSKRI ALNFVELLPP EVTVKIFNYL DIKSLCNASV 60
TCKTWNSLIE ESDYLWKNHC SAVRAVCQKE IDRDRDNGCS WKVTLLRNFW KSNVKQAWLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCATACTG AGCGCACACG CATTCTTGGC AGGGGGTGTG TGTGTGTATT ATGACGCCAT 60
CAAAAACAAA CAGGTACCGG AGCGAGGACA TTTAAACGGT CAACAGAAAG GGGAAAAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001692	Ailuropoda melanoleuca	65.62	1.00e-33	135.00
IUUC-Atr-002943	Amborella trichopoda	28.21	4.00e-03	36.60
IUUC-Apl-003195	Anas platyrhynchos	60.00	1.00e-38	151.00
IUUC-Aca-004788	Anolis carolinensis	61.86	2.00e-33	134.00
IUUC-Bta-012537	Bos taurus	67.02	1.00e-33	135.00
IUUC-Bol-015252	Brassica oleracea	32.31	6.00e-03	35.40
IUUC-Cja-019552	Callithrix jacchus	56.70	1.00e-30	125.00
IUUC-Cfa-020875	Canis familiaris	67.74	2.00e-22	97.40
IUUC-Cpo-021823	Cavia porcellus	67.71	5.00e-34	136.00
IUUC-Csa-023619	Chlorocebus sabaeus	62.50	3.00e-31	127.00
IUUC-Cho-024815	Choloepus hoffmanni	55.47	3.00e-34	137.00
IUUC-Dor-030194	Dipodomys ordii	60.20	2.00e-30	124.00
IUUC-Eca-033364	Equus caballus	66.67	2.00e-33	134.00
IUUC-Fca-035814	Felis catus	62.50	8.00e-33	132.00
IUUC-Fal-036928	Ficedula albicollis	60.38	9.00e-35	138.00
IUUC-Gga-040245	Gallus gallus	55.04	2.00e-37	147.00
IUUC-Gac-041831	Gasterosteus aculeatus	53.47	2.00e-29	120.00
IUUC-Ggo-045464	Gorilla gorilla	62.77	6.00e-32	129.00
IUUC-Hsa-045817	Homo sapiens	52.76	5.00e-32	129.00
IUUC-Itr-049061	Ictidomys tridecemlineatus	57.25	3.00e-33	134.00
IUUC-Loc-052597	Lepisosteus oculatus	51.94	1.00e-37	148.00
IUUC-Laf-054453	Loxodonta africana	63.92	4.00e-33	133.00
IUUC-Mcc-055343	Macaca mulatta	63.83	5.00e-32	129.00
IUUC-Mga-059631	Meleagris gallopavo	55.81	1.00e-36	145.00
IUUC-Mdo-062604	Monodelphis domestica	58.59	1.00e-37	148.00
IUUC-Mmu-063222	Mus musculus	54.76	2.00e-31	127.00
IUUC-Nle-069650	Nomascus leucogenys	64.58	6.00e-33	132.00
IUUC-Opr-070720	Ochotona princeps	65.62	5.00e-33	133.00
IUUC-Ont-071309	Oreochromis niloticus	44.92	1.00e-29	121.00
IUUC-Oan-073265	Ornithorhynchus anatinus	57.03	3.00e-36	143.00
IUUC-Ocu-074967	Oryctolagus cuniculus	64.58	5.00e-32	129.00
IUUC-Olu-087621	Ostreococcus lucimarinus	43.59	3.00e-02	34.30
IUUC-Oar-090070	Ovis aries	64.89	3.00e-33	134.00
IUUC-Ptr-090920	Pan troglodytes	62.77	6.00e-32	129.00
IUUC-Pan-092170	Papio anubis	62.50	3.00e-31	127.00
IUUC-Psi-093939	Pelodiscus sinensis	60.16	3.00e-41	160.00
IUUC-Pfo-096318	Poecilia formosa	56.70	3.00e-31	127.00
IUUC-Pab-097968	Pongo abelii	63.83	3.00e-32	130.00
IUUC-Pca-100414	Procavia capensis	61.46	1.00e-32	131.00
IUUC-Pva-102518	Pteropus vampyrus	55.56	3.00e-29	120.00
IUUC-Rno-106002	Rattus norvegicus	58.25	8.00e-31	125.00
IUUC-Sha-107402	Sarcophilus harrisii	68.75	7.00e-37	145.00
IUUC-Ssc-116238	Sus scrofa	65.96	1.00e-33	135.00
IUUC-Tru-118778	Takifugu rubripes	51.55	2.00e-27	114.00
IUUC-Tsy-118939	Tarsius syrichta	63.83	1.00e-31	128.00
IUUC-Tbe-128104	Tupaia belangeri	58.33	6.00e-28	116.00
IUUC-Ttr-129092	Tursiops truncatus	67.02	4.00e-33	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence