iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098807

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_761292; POPTR_0005s24050g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s24050	POPTR_0005s24050.1	POPTR_0005s24050.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	57.14	1.00e-111	400.00	IUUC-Ath-007274
E3 activity/RING/RING	37.08	3.00e-11	67.80	IUUC-Hsa-045665
ULD/UDP/UFD/RAWUL	37.08	3.00e-11	67.80	IUUC-Hsa-045665
E3 activity/RING/RING	57.54	3.00e-112	395.00	IUUC-Ots-000012

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGNQNHQHRV VKVRRETIEA CMTCPLCNKL LRDATTISEC LHTFCRKCIY QRISDEGLDS 60
CPICNINLGC IPLEKLRPDH NLQDVRSKIF PYKRRKVEAP EVVESVTLPV IRRKERSLSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAACCACA CGAGCATTCG GCACAAATCA ACATTATAAC CCAAATGTTA TAATATCTAA 60
CCCTGCCTTG TGTTTAATAT TAATATTTAT TCTCTGTGTC TAATTAAATC ACAAGAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0005s24050g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000603	Aegilops tauschii	43.98	3.00e-84	304.00
IUUC-Atr-002463	Amborella trichopoda	56.00	1.00e-110	392.00
IUUC-Aca-004484	Anolis carolinensis	40.74	5.00e-13	67.40
IUUC-Aly-005613	Arabidopsis lyrata	56.44	2.00e-111	395.00
IUUC-Ath-007274	Arabidopsis thaliana	56.67	4.00e-111	394.00
IUUC-Bdi-014778	Brachypodium distachyon	47.83	5.00e-85	307.00
IUUC-Bol-016091	Brassica oleracea	56.21	7.00e-111	393.00
IUUC-Bra-017953	Brassica rapa	54.75	4.00e-108	384.00
IUUC-Cel-018403	Caenorhabditis elegans	28.41	1.00e-08	54.30
IUUC-Csv-026354	Ciona savignyi	46.48	3.00e-12	64.70
IUUC-Fal-036909	Ficedula albicollis	40.74	6.00e-13	67.00
IUUC-Gga-040513	Gallus gallus	40.74	6.00e-13	67.00
IUUC-Gma-043895	Glycine max	67.37	1.00e-140	492.00
IUUC-Hsa-045665	Homo sapiens	37.08	1.00e-12	67.40
IUUC-Hvu-047653	Hordeum vulgare	46.23	2.00e-88	319.00
IUUC-Lpe-050924	Leersia perrieri	50.47	5.00e-97	347.00
IUUC-Loc-052161	Lepisosteus oculatus	37.21	3.00e-12	65.10
IUUC-Laf-054108	Loxodonta africana	37.65	2.00e-12	66.20
IUUC-Mtr-058189	Medicago truncatula	61.02	9.00e-108	383.00
IUUC-Mga-059573	Meleagris gallopavo	39.47	2.00e-09	55.80
IUUC-Mdo-062485	Monodelphis domestica	40.74	5.00e-13	67.40
IUUC-Mac-065284	Musa acuminata	51.30	2.00e-104	371.00
IUUC-Nle-069253	Nomascus leucogenys	37.08	1.00e-12	67.40
IUUC-Oan-073034	Ornithorhynchus anatinus	40.74	8.00e-13	66.60
IUUC-Oba-075690	Oryza barthii	50.95	5.00e-95	340.00
IUUC-Obr-076192	Oryza brachyantha	47.14	4.00e-95	341.00
IUUC-Ogl-077513	Oryza glaberrima	51.06	1.00e-92	332.00
IUUC-Ogu-078755	Oryza glumaepatula	50.95	1.00e-91	329.00
IUUC-Oin-079944	Oryza indica	47.03	3.00e-84	305.00
IUUC-Olo-080276	Oryza longistaminata	48.47	3.00e-76	278.00
IUUC-Ome-081413	Oryza meridionalis	41.20	2.00e-70	258.00
IUUC-Oni-082398	Oryza nivara	51.06	2.00e-92	332.00
IUUC-Opu-083871	Oryza punctata	50.12	1.00e-98	352.00
IUUC-Oru-084965	Oryza rufipogon	51.06	2.00e-92	332.00
IUUC-Osa-086282	Oryza sativa	50.00	1.00e-67	249.00
IUUC-Oga-088901	Otolemur garnettii	41.98	6.00e-13	67.00
IUUC-Oar-089912	Ovis aries	39.51	5.00e-14	68.20
IUUC-Pan-092667	Papio anubis	37.08	1.00e-12	66.60
IUUC-Psi-093117	Pelodiscus sinensis	40.74	5.00e-13	67.40
IUUC-Pma-094526	Petromyzon marinus	32.74	4.00e-14	69.30
IUUC-Pca-100551	Procavia capensis	36.05	4.00e-12	64.70
IUUC-Ppe-101689	Prunus persica	53.90	5.00e-116	410.00
IUUC-Sha-107034	Sarcophilus harrisii	40.74	5.00e-13	67.40
IUUC-Sit-109956	Setaria italica	48.70	1.00e-91	330.00
IUUC-Sly-111519	Solanum lycopersicum	63.79	6.00e-138	483.00
IUUC-Sbi-114697	Sorghum bicolor	45.28	1.00e-79	290.00
IUUC-Tgu-116929	Taeniopygia guttata	40.74	6.00e-13	67.00
IUUC-Tca-121638	Theobroma cacao	67.82	7.00e-153	533.00
IUUC-Tae-123760	Triticum aestivum	45.43	3.00e-89	322.00
IUUC-Vvi-131533	Vitis vinifera	68.42	7.00e-149	519.00
IUUC-Xtr-131955	Xenopus tropicalis	40.74	5.00e-13	67.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence