iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111926

Ensembl Protein ID

PGSC0003DMT400059810

UniProt Accession

M1C4S1; M1C4S1_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400023259	PGSC0003DMT400059808	PGSC0003DMT400059808
PGSC0003DMG400023259	PGSC0003DMT400059810	PGSC0003DMT400059810

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-10	42.2	51	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
            t+ +f  d ++++s++ D ++k+W++ tg+l+k
   Q: 51   ATSANFtKDqRYILSSAKDSSVKLWEVGTGRLVK 84
           5788999777********************9987 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGVNGAINQV RYSSTGGMYV TASKDGAIRL WDGVTASCVR SIDGAHGAAE ATSANFTKDQ 60
RYILSSAKDS SVKLWEVGTG RLVKQYLGAT HTQLRCQAVF NDTEEFVLSI DESLNEIVAW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGCCTTCT ATCTATGATA TGATACCTGG TTGACTGAAT CAACATGTGA TGTTGGCTTA 60
TAAATCTTAA AAGAGAAATG AAGCTCCGGA GGGCAGCTCG TCGATGATTG ATCTCAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	44.72	6.00e-33	134.00
IUUC-Atr-002687	Amborella trichopoda	54.13	8.00e-62	229.00
IUUC-Apl-003438	Anas platyrhynchos	44.72	4.00e-33	134.00
IUUC-Aca-005178	Anolis carolinensis	44.72	4.00e-33	134.00
IUUC-Aly-005791	Arabidopsis lyrata	70.37	2.00e-69	255.00
IUUC-Ath-006689	Arabidopsis thaliana	72.22	1.00e-71	262.00
IUUC-Ame-011217	Astyanax mexicanus	43.56	2.00e-32	131.00
IUUC-Bta-012619	Bos taurus	44.72	6.00e-33	134.00
IUUC-Bdi-014515	Brachypodium distachyon	71.88	4.00e-67	247.00
IUUC-Bra-017450	Brassica rapa	59.69	1.00e-63	236.00
IUUC-Cel-018151	Caenorhabditis elegans	37.89	2.00e-26	112.00
IUUC-Cja-019304	Callithrix jacchus	45.34	2.00e-33	135.00
IUUC-Cfa-020208	Canis familiaris	44.72	6.00e-33	134.00
IUUC-Cpo-022245	Cavia porcellus	44.72	6.00e-33	134.00
IUUC-Csa-023066	Chlorocebus sabaeus	45.34	2.00e-33	135.00
IUUC-Cho-024770	Choloepus hoffmanni	44.72	5.00e-33	133.00
IUUC-Cin-025621	Ciona intestinalis	35.33	1.00e-23	102.00
IUUC-Csv-026071	Ciona savignyi	39.63	2.00e-28	118.00
IUUC-Dre-028254	Danio rerio	43.75	1.00e-31	129.00
IUUC-Dno-029903	Dasypus novemcinctus	44.72	6.00e-33	134.00
IUUC-Dor-030423	Dipodomys ordii	44.72	6.00e-33	134.00
IUUC-Dme-031993	Drosophila melanogaster	39.49	4.00e-29	120.00
IUUC-Eca-033316	Equus caballus	44.72	6.00e-33	134.00
IUUC-Eeu-034452	Erinaceus europaeus	44.72	6.00e-33	134.00
IUUC-Fca-036447	Felis catus	44.72	6.00e-33	134.00
IUUC-Fal-037601	Ficedula albicollis	44.72	4.00e-33	134.00
IUUC-Gmo-038531	Gadus morhua	45.34	2.00e-31	128.00
IUUC-Gga-040869	Gallus gallus	44.72	4.00e-33	134.00
IUUC-Gac-042380	Gasterosteus aculeatus	44.44	3.00e-31	128.00
IUUC-Gma-043478	Glycine max	77.50	5.00e-77	280.00
IUUC-Ggo-045302	Gorilla gorilla	45.34	2.00e-33	135.00
IUUC-Hsa-045678	Homo sapiens	45.34	2.00e-33	135.00
IUUC-Hvu-047301	Hordeum vulgare	73.75	1.00e-69	255.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	44.72	6.00e-33	134.00
IUUC-Lch-050319	Latimeria chalumnae	44.10	5.00e-33	134.00
IUUC-Lpe-051440	Leersia perrieri	60.62	4.00e-55	207.00
IUUC-Loc-052035	Lepisosteus oculatus	45.00	1.00e-32	132.00
IUUC-Laf-054275	Loxodonta africana	44.72	6.00e-33	134.00
IUUC-Mcc-055857	Macaca mulatta	45.34	2.00e-33	135.00
IUUC-Mtr-058667	Medicago truncatula	77.50	7.00e-77	280.00
IUUC-Mga-059710	Meleagris gallopavo	44.72	4.00e-33	134.00
IUUC-Mmr-060604	Microcebus murinus	44.72	6.00e-33	134.00
IUUC-Mdo-062953	Monodelphis domestica	44.72	6.00e-33	134.00
IUUC-Mmu-064292	Mus musculus	44.10	8.00e-33	133.00
IUUC-Mac-064568	Musa acuminata	73.94	8.00e-72	262.00
IUUC-Mpu-066294	Mustela putorius furo	44.72	6.00e-33	134.00
IUUC-Mlu-067279	Myotis lucifugus	44.10	9.00e-33	133.00
IUUC-Nle-069322	Nomascus leucogenys	45.34	2.00e-33	135.00
IUUC-Opr-070580	Ochotona princeps	44.72	8.00e-33	133.00
IUUC-Ont-072554	Oreochromis niloticus	45.00	1.00e-32	132.00
IUUC-Oan-072856	Ornithorhynchus anatinus	44.72	6.00e-33	134.00
IUUC-Ocu-074150	Oryctolagus cuniculus	53.01	1.00e-21	96.70
IUUC-Oba-075585	Oryza barthii	70.00	3.00e-67	247.00
IUUC-Obr-076069	Oryza brachyantha	70.32	6.00e-65	240.00
IUUC-Ogl-077045	Oryza glaberrima	70.00	4.00e-67	247.00
IUUC-Ogu-078697	Oryza glumaepatula	70.86	4.00e-63	236.00
IUUC-Oin-080119	Oryza indica	70.00	4.00e-67	247.00
IUUC-Olo-081093	Oryza longistaminata	68.92	9.00e-60	224.00
IUUC-Ome-081718	Oryza meridionalis	68.15	2.00e-63	236.00
IUUC-Oni-082072	Oryza nivara	70.00	3.00e-67	247.00
IUUC-Opu-084080	Oryza punctata	69.43	7.00e-65	239.00
IUUC-Oru-085070	Oryza rufipogon	70.00	5.00e-67	248.00
IUUC-Osa-086149	Oryza sativa	70.00	4.00e-67	247.00
IUUC-Ola-086697	Oryzias latipes	43.12	1.00e-31	129.00
IUUC-Oga-088697	Otolemur garnettii	44.72	6.00e-33	134.00
IUUC-Oar-089774	Ovis aries	44.72	7.00e-33	134.00
IUUC-Ptr-090924	Pan troglodytes	45.34	2.00e-33	135.00
IUUC-Pan-092373	Papio anubis	45.34	2.00e-33	135.00
IUUC-Psi-094001	Pelodiscus sinensis	44.72	1.00e-32	133.00
IUUC-Pma-094274	Petromyzon marinus	43.90	4.00e-32	131.00
IUUC-Ppa-095562	Physcomitrella patens	72.67	2.00e-71	261.00
IUUC-Pfo-097235	Poecilia formosa	44.38	4.00e-32	130.00
IUUC-Pab-098608	Pongo abelii	45.34	2.00e-33	135.00
IUUC-Pca-100268	Procavia capensis	44.72	6.00e-33	134.00
IUUC-Ppe-101425	Prunus persica	83.75	6.00e-79	286.00
IUUC-Pva-103183	Pteropus vampyrus	44.72	6.00e-33	134.00
IUUC-Rno-105097	Rattus norvegicus	44.10	8.00e-33	133.00
IUUC-Sha-107642	Sarcophilus harrisii	44.72	6.00e-33	134.00
IUUC-Smo-108680	Selaginella moellendorffii	62.11	2.00e-58	218.00
IUUC-Sit-110471	Setaria italica	73.89	9.00e-68	250.00
IUUC-Sar-112947	Sorex araneus	53.09	2.00e-21	94.70
IUUC-Sbi-113769	Sorghum bicolor	72.61	8.00e-67	246.00
IUUC-Ssc-115736	Sus scrofa	44.72	6.00e-33	134.00
IUUC-Tgu-117457	Taeniopygia guttata	44.72	4.00e-33	134.00
IUUC-Tru-117760	Takifugu rubripes	45.00	6.00e-33	134.00
IUUC-Tsy-118943	Tarsius syrichta	44.72	6.00e-33	134.00
IUUC-Tni-120081	Tetraodon nigroviridis	44.38	1.00e-32	132.00
IUUC-Tca-121190	Theobroma cacao	83.44	8.00e-82	296.00
IUUC-Tae-123709	Triticum aestivum	74.38	3.00e-70	257.00
IUUC-Tur-126329	Triticum urartu	72.50	9.00e-69	253.00
IUUC-Tbe-127878	Tupaia belangeri	44.72	4.00e-33	134.00
IUUC-Ttr-128985	Tursiops truncatus	44.72	6.00e-33	134.00
IUUC-Vpa-130147	Vicugna pacos	44.72	7.00e-33	133.00
IUUC-Vvi-130935	Vitis vinifera	80.98	1.00e-79	288.00
IUUC-Xtr-132482	Xenopus tropicalis	43.48	3.00e-32	131.00
IUUC-Xma-133929	Xiphophorus maculatus	44.38	4.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence